BAC Information

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BAC

Clone NameB6Ng01-318B18
Chromosome3 (Build37)
Map Location 92,046,650 - 92,047,773
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042463, Pglyrp3, EG619750, Lor, A030004J04Rik, Sprr2a, LOC100042999, LOC545543
Downstream geneLOC100043005, LOC545545, LOC100042514, LOC619984, Sprr2b, Sprr2c, Sprr2d, Sprr2e, Sprr2f, Sprr2g, Sprr2h, Sprr2i, Sprr2j, LOC100043022, Sprr2k, Sprr1b, Sprr3, LOC100042575, Sprr1a, Sprr4, LOC100042581, Ivl, Smcp, Lce1a1, Lce1b, LOC620325, Lce1a2, Lce1c, Lce1d, LOC100043062, Lce1e, Lce1f, LOC668264, Lce1g, Lce1h, Lce1i, LOC545547, LOC631101, Kprp, Lce1l, 2310050C09Rik, Lce3a, Lce3b, Lce3c, LOC630994, 2310001H18Rik, Lce3f, Crct1, Lce1m, EG229571, Crnn, EG229574
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318B18.bB6Ng01-318B18.g
ACCGA108080GA108081
length1,1881,128
definitionB6Ng01-318B18.b B6Ng01-318B18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaaaggaagaaaaaaatagctacaaaacatcgggaaaaaaaag
ttcattgctcatagcaatgaagaaaatgaaactcgaaacaattttgggat
cttatcttattccaaacagaattacaaaaagcaaacaacgaacaatagat
gctagaggagatgtggaaaaggaaccctaattcactgttggtggtgcagc
tgctctggaaattaatgttgaaaattctataaaggataaaaataaatctt
ccatatgacacagcattaccactccttgtaatatgtccaaaagactagac
atcctattccacggatacttgctcagccatattgacaatagacaggagat
ggaaacaatctaaatatcttcaaaccaataaacagataatgaaaatgtgg
tacattacactatgatactatccagctttaaagaaaaacaaaatcatata
cattacaggtaaatggatagaactaggaatgatcatgttcaatgaggtaa
tccagatggatacaacaaatatatcatgttgtgtctcacctgagtcacct
agcaccaaatcttaagatgtaaatatatatgtagcctggaataactgcta
aaacaaatgaggaaagaaaatagggtcatgccgcaggccctctggtcccc
tgtgcctgcataggaaagtgtctctagagtagatgggcagagattaggat
gtagtgatagtcagtcaaacatacaagagaggtgttgaatctgaatgtaa
tgttccagtcgagcatcagacttttataatacagaataaattgcagaaca
aggcacattgaattttttcaggtgcaaaaggagtgacttcaaaaggaacc
agataaatgtataacactagagattagcacagatgcaaggggagtgacta
caaagggaatttgtagggaccagataaatgtttacattagagattagcac
tttctgccaggcaagagttttacacttagagttaattgcctcagggtagt
taactcttgacacgctcaagaataatgtagtgtcactgacccaaattctt
ctagcctcgtaattccttatcttatattctgaagactatcattttcagta
tagtaatacaagttggcctcctttggcatggatgtagtctaataatacgg
aatttcctatctccaggtggagcaaatattttatggac
gaattctttgtttagctctgagccccatttttaatggggttatttgattt
tctggagtccaccttcttgagttctttatatatattttatctctattgtt
aaccagcaaatggaacctttaagctttgcaggaactttagttcatttggg
aatgaagataataaaagaccaaggaactcctgattcagcttgatttggag
tatttggtaggtggaggttgcaattcttttggctttgttttatttttgcc
ctctcaattaacattcaagactgaaatagtccgtagtccccagaggtgtg
ggcccaatacagttacaattccacctgaaaatcaatctacttctggttta
tttgaaaccctgccactcactcctatttattaaataccaaaccacccaga
agttatagcaaactgtacaattgaacaatactaactgttacttggatttt
tacaactgtatcatatgtttatcttgagactggagagatgcctctgtggt
gaaaagcatttgctcttcttggaaaggaccagggttcatatccaggtatc
catgccagggagctgacagataactaccagtaattccagttccagagggt
ctgacatactcttctagccttcacaggcaggcactgcccacatatagtgc
atttgtatagatacagagaaagtattcattgcatgtaaaatagaagcaaa
tacatatactttaaaaatatcaaattgtagggtacaagctaagacaaaag
atctaagaagcatgttgtgatgcttaggtgactaaaaatgttcaccagag
gcaaaacagtttaggtggaggtgagctaaattcaaatgaacatctgtaat
gtttacatgcaacatttatttaaaggacttcaaaacactgatttggtgat
cagcagtaaaggtgttcatttaatatcagttgccccttgggtggactttg
tacctgaagataagtttttttgatcctgaagatccagcctgtaatatacc
ctttcctttgataactccatatactcactataccagaaagaaaattcagc
attttccatgtccattgacagcagaaaaattggcaggtatgcaatcagaa
aactgaggttcctactgtgttcagatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_92046650_92047773
seq2: B6Ng01-318B18.g_68_1195

seq1  GAATTCTTTGTTTAGCTCTGAGCCCCATTTTTAATGGGGTTATTTGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTCTGAGCCCCATTTTTAATGGGGTTATTTGATTT  50

seq1  TCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTTTATCTCTATTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTTTATCTCTATTGTT  100

seq1  AACCAGCAAATGGAACCTTTAAGCTTTGCAGGAACTTTAGTTCATTTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGCAAATGGAACCTTTAAGCTTTGCAGGAACTTTAGTTCATTTGGG  150

seq1  AATGAAGATAATAAAAGACCAAGGAACTCCTGATTCAGCTTGATTTGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGATAATAAAAGACCAAGGAACTCCTGATTCAGCTTGATTTGGAG  200

seq1  TATTTGGTAGGTGGAGGTTGCAATTCTTTTGGCTTTGTTTTATTTTTGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGGTAGGTGGAGGTTGCAATTCTTTTGGCTTTGTTTTATTTTTGCC  250

seq1  CTCTCAATTAACATTCAAGACTGAAATAGTCCGTAGTCCCCAGAGGTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAATTAACATTCAAGACTGAAATAGTCCGTAGTCCCCAGAGGTGTG  300

seq1  GGCCCAATACAGTTACAATTCCACCTGAAAATCAATCTACTTCTGGTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAATACAGTTACAATTCCACCTGAAAATCAATCTACTTCTGGTTTA  350

seq1  TTTGAAACCCTGCCACTCACTCCTATTTATTAAATACCAAACCACCCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAACCCTGCCACTCACTCCTATTTATTAAATACCAAACCACCCAGA  400

seq1  AGTTATAGCAAACTGTACAATTGAACAATACTAACTGTTACTTGGATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATAGCAAACTGTACAATTGAACAATACTAACTGTTACTTGGATTTT  450

seq1  TACAACTGTATCATATGTTTATCTTGAGACTGGAGAGATGCCTCTGTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACTGTATCATATGTTTATCTTGAGACTGGAGAGATGCCTCTGTGGT  500

seq1  GAAAAGCATTTGCTCTTCTTGGAAAGGACCAGGGTTCATATCCAGGTATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGCATTTGCTCTTCTTGGAAAGGACCAGGGTTCATATCCAGGTATC  550

seq1  CATGCCAGGGAGCTGACAGATAACTACCAGTAATTCCAGTTCCAGAGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCAGGGAGCTGACAGATAACTACCAGTAATTCCAGTTCCAGAGGGT  600

seq1  CTGACATACTCTTCTAGCCTTCACAGGCAGGCACTGCCCACATATAGTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACATACTCTTCTAGCCTTCACAGGCAGGCACTGCCCACATATAGTGC  650

seq1  ATTTGTATAGATACAGAGAAAGTATTCATTGCATGTAAAATAGAAGCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTATAGATACAGAGAAAGTATTCATTGCATGTAAAATAGAAGCAAA  700

seq1  TACATATACTTTAAAAATATCAAATTGTAGGGTACAAGCTAAGACAAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATACTTTAAAAATATCAAATTGTAGGGTACAAGCTAAGACAAAAG  750

seq1  ATCTAAGAAGCATGTTGTGATGCTTAGGTGACTAAAAATGTTCACCAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAGAAGCATGTTGTGATGCTTAGGTGACTAAAAATGTTCACCAGAG  800

seq1  GCAAAACAGTTTAGGTGGAGGTGAGCTAAATTCAAATGAACATCTGTAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAACAGTTTAGGTGGAGGTGAGCTAAATTCAAATGAACATCTGTAAT  850

seq1  GTTTACATGCAACATTTATTTAAAGGACTTCAAAACACTGATTTGGTGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACATGCAACATTTATTTAAAGGACTTCAAAACACTGATTTGGTGAT  900

seq1  CAGCAGT-AAGGTGTTCATTTAATATCAGTTGCCCCTT-GGTGGACTTTG  948
      ||||||| |||||||||||||||||||||||||||||| |||||||||||
seq2  CAGCAGTAAAGGTGTTCATTTAATATCAGTTGCCCCTTGGGTGGACTTTG  950

seq1  TACCTGAAGATAAG-TTTTTTGATCCTGAAGATCCAGCCTGTAATATA-C  996
      |||||||||||||| ||||||||||||||||||||||||||||||||| |
seq2  TACCTGAAGATAAGTTTTTTTGATCCTGAAGATCCAGCCTGTAATATACC  1000

seq1  CTTTCCTTTGATAACTCCATATACTCACTATACCAGAAAGAAAA-TCAGC  1045
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTTTCCTTTGATAACTCCATATACTCACTATACCAGAAAGAAAATTCAGC  1050

seq1  ATTTTCATTGT-CATGGACAGCAG--AAATTTGGAAGTATGCATTCAGAA  1092
      ||||||  ||| ||| ||||||||  ||||| | | ||||||| ||||||
seq2  ATTTTCCATGTCCATTGACAGCAGAAAAATTGGCAGGTATGCAATCAGAA  1100

seq1  AACTGAGGTTCCTACATTTGTGTTCCAGATGT  1124
      |||||||||||||||   |||||| |||||||
seq2  AACTGAGGTTCCTAC---TGTGTT-CAGATGT  1128