BAC Information

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BAC

Clone NameB6Ng01-319K13
Chromosome3 (Build37)
Map Location 150,776,696 - 150,777,859
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040455, LOC100040463, LOC623554
Downstream geneEltd1, Ifi44, H28, Ptgfr, LOC100040741, LOC100040597, LOC676548, Gipc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319K13.bB6Ng01-319K13.g
ACCGA109233GA109234
length1,165356
definitionB6Ng01-319K13.b B6Ng01-319K13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctactacaaaacttgaaaagagtatgaactccacatgtgcttccc
caaaaaattgtctttctctgatttttcaagctttcctttcttcaaaattt
ttattttgtctccaaatttaaaaggacttattagtatattatgtctgtga
ttccttcagaatatgaaattgtgttgtcaatatataggtatggcactctt
tgtgtacctatgtatttccctttaaagttataaaatatctgtgaggtaat
tttgtggatacattattaatacatattttccacattggagttattcagaa
gcatttaataaatgtactcatgccatcattgtatgtcttattacttgtgt
caacaaagtaatacatacacagtttaaaaataagctattagtacatttct
ctaacaataacaaagacacatttagcatgagatttttatcatattatata
tttctaactatttttgctcatttgtatgcatgctgatgaaaataaataaa
cattatcagtcactcatatatcaaagaatgacaagagtctagaaaatctc
tacagagcaaccatggtatcctccttctcatacccactctctgctaaaga
ttgactttcctttctcatttcttccttccctctcttcttctccttcctcc
tttgattccattttgttccagttaagtgcaggtgcatgtattgatgcatc
cgaaccaaaagaaatagaagcagacgaatattacttgtccagtgtgataa
aagtcatggtaaacatatttcattcataccactaaacagctttgccaaag
aatatgatgcagtagatggtgctagctcataaatgcttcttagaacatgt
ctcagccaaagccaaatgaaaattaggtaaaaagaaatctcaaacagctt
tctgtgcttacatgaaatcaaataaatttccagaaccccattagaaatat
atagcagttgaaaacattgggtttatcaatgactggcctgacttgagacc
tatccttagaggcagagccacccttgacactagtaatgatacttctgctt
aacttcagaacaggagtccagccataactgttctttatgagaggcttcac
ccaatagccgaacgaaacgaattgcaagagaccctagtcaacattcagca
agcctcatggagtct

ctgtttggtttttttttttttttttttttttgatgtagttatcttactta
gtttagagttttccttttaatatttcctgtagtgcagaatttgtgaatag
atttagattttttttgaaatatcttgtttttgccatctatggtaattgag
tgttttgttgggcatagtggtctacactggcatctctggttttctagagg
ttgcaatatatctatctgtccagtcccttttagcttttaaagctctgttg
agaagtcaggtgtaattcagataggcctacctatgtgtattatttggcct
tttccccttgttgcttttaatatccttccttccttccttccttccttcct
tacata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_150776696_150777859
seq2: B6Ng01-319K13.b_46_1210

seq1  GAATTCTACTACAAAACTTGAAAAGAGTATGAACTCCACATGTGCTTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTACAAAACTTGAAAAGAGTATGAACTCCACATGTGCTTCCC  50

seq1  CAAAAAATTGTCTTTCTCTGATTTTTCAAGCTTTCCTTTCTTCAAAATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAATTGTCTTTCTCTGATTTTTCAAGCTTTCCTTTCTTCAAAATTT  100

seq1  TTATTTTGTCTCCAAATTTAAAAGGACTTATTAGTATATTATGTCTGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTGTCTCCAAATTTAAAAGGACTTATTAGTATATTATGTCTGTGA  150

seq1  TTCCTTCAGAATATGAAATTGTGTTGTCAATATATAGGTATGGCACTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCAGAATATGAAATTGTGTTGTCAATATATAGGTATGGCACTCTT  200

seq1  TGTGTACCTATGTATTTCCCTTTAAAGTTATAAAATATCTGTGAGGTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTACCTATGTATTTCCCTTTAAAGTTATAAAATATCTGTGAGGTAAT  250

seq1  TTTGTGGATACATTATTAATACATATTTTCCACATTGGAGTTATTCAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGGATACATTATTAATACATATTTTCCACATTGGAGTTATTCAGAA  300

seq1  GCATTTAATAAATGTACTCATGCCATCATTGTATGTCTTATTACTTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTAATAAATGTACTCATGCCATCATTGTATGTCTTATTACTTGTGT  350

seq1  CAACAAAGTAATACATACACAGTTTAAAAATAAGCTATTAGTACATTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAAGTAATACATACACAGTTTAAAAATAAGCTATTAGTACATTTCT  400

seq1  CTAACAATAACAAAGACACATTTAGCATGAGATTTTTATCATATTATATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAATAACAAAGACACATTTAGCATGAGATTTTTATCATATTATATA  450

seq1  TTTCTAACTATTTTTGCTCATTTGTATGCATGCTGATGAAAATAAATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAACTATTTTTGCTCATTTGTATGCATGCTGATGAAAATAAATAAA  500

seq1  CATTATCAGTCACTCATATATCAAAGAATGACAAGAGTCTAGAAAATCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATCAGTCACTCATATATCAAAGAATGACAAGAGTCTAGAAAATCTC  550

seq1  TACAGAGCAACCATGGTATCCTCCTTCTCATACCCACTCTCTGCTAAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGCAACCATGGTATCCTCCTTCTCATACCCACTCTCTGCTAAAGA  600

seq1  TTGACTTTCCTTTCTCATTTCTTCCTTCCCTCTCTTCTTCTCCTTCCTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTTTCCTTTCTCATTTCTTCCTTCCCTCTCTTCTTCTCCTTCCTCC  650

seq1  TTTGATTCCATTTTGTTCCAGTTAAGTGCAGGTGCATGTATTGATGCATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTCCATTTTGTTCCAGTTAAGTGCAGGTGCATGTATTGATGCATC  700

seq1  CGAACCAAAAGAAATAGAAGCAGACGAATATTACTTGTCCAGTGTGATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAACCAAAAGAAATAGAAGCAGACGAATATTACTTGTCCAGTGTGATAA  750

seq1  AAGTCATGGTAAACATATTTCATTCATACCACTAAACAGCTTTGCCAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCATGGTAAACATATTTCATTCATACCACTAAACAGCTTTGCCAAAG  800

seq1  AATATGATGCAGTAGATGGTGCTAGCTCATAAATGCTTCTTAGAACATGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGATGCAGTAGATGGTGCTAGCTCATAAATGCTTCTTAGAACATGT  850

seq1  CTCAGGCCAAAGCCAAATGAAAATTAGGTAAAAAGAAATCTCAAACAGCT  900
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCA-GCCAAAGCCAAATGAAAATTAGGTAAAAAGAAATCTCAAACAGCT  899

seq1  TTCTGTGCTTACATGAAATCAAATAAATTTCCAGAACCCCATTAGAAATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTCTGTGCTTACATGAAATCAAATAAATTTCCAGAACCCCATTAGAAAT-  948

seq1  ATATAGCAGTTGAAAACATT-GGTTTATCAATGACTGGCCTGACTTGAGA  999
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ATATAGCAGTTGAAAACATTGGGTTTATCAATGACTGGCCTGACTTGAGA  998

seq1  CCTATCCTAAGAGGCAGAGCCAACCCCTGACACTAGTAATGATAC-TCTG  1048
      |||||||| |||||||||||| |||| |||||||||||||||||| ||||
seq2  CCTATCCTTAGAGGCAGAGCC-ACCCTTGACACTAGTAATGATACTTCTG  1047

seq1  CTAAACTTCAAGACAGGAGTCCAGCATAAACTGT--CTTATGAGAGGCTT  1096
      || |||||||  |||||||||||||   ||||||   |||||||||||||
seq2  CTTAACTTCAGAACAGGAGTCCAGCCATAACTGTTCTTTATGAGAGGCTT  1097

seq1  CACCCAATAGCAGACAGAAAC-AGATGC-AGAGACCCATAGTCAAACATC  1144
      ||||||||||| ||  ||||| |  ||| |||||||| ||||| ||||| 
seq2  CACCCAATAGCCGAACGAAACGAATTGCAAGAGACCC-TAGTC-AACATT  1145

seq1  AGGCAGAGCTCATGGAGTCT  1164
        |||   ||||||||||||
seq2  CAGCAAGCCTCATGGAGTCT  1165


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