MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-320C03
Chromosome	3 (Build37)
Map Location	56,295,285 - 56,296,480
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Dclk1, Mab21l1, 4933417G07Rik
Downstream gene	LOC100040139, LOC666585, Tm4sf1, LOC383862, Tm4sf4, Wwtr1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Dclk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13175 MGI:1330861
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mab21l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17116 MGI:1333773
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4933417G07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71182 MGI:1918432
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 5 Proteins

name	LOC100040139 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040139
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC666585 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666585
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 ESTs, 8 Proteins pseudo : _no_value

name	Tm4sf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17112 MGI:104678
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC383862 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383862
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 13 Proteins pseudo : _no_value

name	Tm4sf4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229302 MGI:2385173
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wwtr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:97064 MGI:1917649
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dclk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130532 GeneID:13175 MGI:1330861
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : doublecortin-like kinase 1 transcript_id : NM_019978.2

name	Mab21l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560806 GeneID:17116 MGI:1333773
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mab-21-like 1 (C. elegans) transcript_id : NM_010750.2

name	Tm4sf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:88900519 GeneID:17112 MGI:104678
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane 4 superfamily member 1 transcript_id : NM_008536.3

name	Tm4sf4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21704061 GeneID:229302 MGI:2385173
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane 4 superfamily member 4 transcript_id : NM_145539.1

name	Wwtr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84370279 GeneID:97064 MGI:1917649
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WW domain containing transcription regulator 1 transcript_id : NM_133784.2

name	Dclk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910164 CCDS:CCDS17359.1 GeneID:13175 MGI:1330861
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007409 - axonogenesis [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0030900 - forebrain development [Evidence IMP]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007399 - nervous system development [Evidence IEA]; GO:0001764 - neuron migration [Evidence IGI]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : doublecortin-like kinase; CLICK-I beta; doublecortin and calcium/calmodulin-dependent protein kinase-like 1 product : double cortin and calcium/calmodulin-dependent protein kinase-like 1 protein_id : NP_064362.1

name	Mab21l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754598 CCDS:CCDS17360.1 GeneID:17116 MGI:1333773
definition	GO_process : GO:0001747 - eye development (sensu Mammalia) [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP] codon_start : 1 product : mab-21-like 1 protein_id : NP_034880.1

name	Tm4sf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678762 GeneID:17112 MGI:104678
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 note : membrane component, surface marker 1; L6 antigen; 12A8 target antigen product : transmembrane 4 superfamily member 1 protein_id : NP_032562.1

name	Tm4sf4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704062 CCDS:CCDS17361.1 GeneID:229302 MGI:2385173
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 exception : mismatches in translation product : transmembrane 4 superfamily member 4 protein_id : NP_663514.1

name	Wwtr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370280 GeneID:97064 MGI:1917649
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0003713 - transcription coactivator activity [Evidence IGI] [Evidence IMP]; GO:0003714 - transcription corepressor activity [Evidence IGI]; GO:0030528 - transcription regulator activity [Evidence IDA] GO_process : GO:0045599 - negative regulation of fat cell differentiation [Evidence IGI]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0001649 - osteoblast differentiation [Evidence IGI] [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA] [Evidence IGI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : transcriptional coactivator with PDZ binding motif product : WW domain containing transcription regulator 1 protein_id : NP_598545.2

name	LOC100040139 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040139
definition	number : 1 pseudo : _no_value

name	4933417G07Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94369549 GeneID:71182 MGI:1918432
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 5 Proteins product : RIKEN cDNA 4933417G07 gene transcript_id : XR_002339.1

name	LOC666585 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149251157 GeneID:666585
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 ESTs, 8 Proteins product : hypothetical LOC666585 pseudo : _no_value transcript_id : XR_031577.1

name	LOC383862 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149251158 GeneID:383862
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 13 Proteins product : similar to fructose-1,6-bisphosphate aldolase A pseudo : _no_value transcript_id : XR_031586.1

clone name	MSMg01-268F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-214A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258N04
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-320C03.b	B6Ng01-320C03.g
ACC	GA109584	GA109585
length	1,195	1,160
definition	B6Ng01-320C03.b	B6Ng01-320C03.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcacctactaacacgtactaaaattggaaatgaacaaagatcgagc taaatctttttgtgcatgtatctgtgcattgtgtgcacatgtgtgtatag tgcagcagcatcatgagcctgaagtgactgatagtgatgtcttaaagatg ataagatgatgatgataatcatgacataaatgtggcatttgaacccaacc aagctgtttctcacattttacttcattctttgcctgttacccttagtgct gtctcatatattttagacttccattgctgcaacattccatcgctgctccc tgccattagcgtcctgctccatcgcactcttggagaatatcaactgccct gtgaattgaccctgcaattatgaccatgtgctttaggaaagtttctgcac gttataaacacatcagtgagccagcggatgtgataatgataaaattacac tgtcttgctttcagcagtttgctgaaagtcactcacaagggaatgcttct tggtctaagggcaaatttcttggtcaccagttcttatagtgactgaaact ctgagaggcagagagattggatcccaaggggtgatgatccctgcatttgt cttaacttgcattaattctgtaagaaatagaagcataatattaataggac cctcagaggttcttttgctcattgaatttagataaattattaatattcct tttttctaaactaaaattttccctggctggagattgtcaagttgagcact aatatgccttgaagggtataagcagacacaaagggaagtagattttttaa aaatcccgtttatatgccacgacacaccattccaggagcatggggacaat tctgctctgacaacatcatgttactctacatataaccttaactgtgcagc atgtgtgtgcataatgtgcgtttgggaaaggcaaaaccactacttaccat tttagggaacatctaggaccactctgtatagatatagacattcactgggg ttctttttttttccattaatttttatttatttactttatgtctggataca gcttccccttcctctctctctagtcttcctcctcccctcccctgacccaa tcccacccactttctccctcagaaaggagaaagaatcctccatgcatagc tacctgcctgccaatccaggtgcagtaggactacttagtgttttc	gaattctagaaagtctttaatttcttcatttatttcttccttgacacagt agtcattcagtggagagttgttcagtttccatgagtttgtaaatctttca cttccttgtgttgttgttggatcccagctttaatccatggatttataata agagaaggggggcgcagtttcttgtctctgttgagacttgcttttttgcc aagtatgtggtcaattttggggaagattccttgagtgctgagaagaaggg atatgcttttgttatttgggtaaatagttttgtagatacttattggtaca tatgagtataacatgttagtttcattatttctctttttagtttctgacta gatgatgtgtctattgatcagaatatggtgttgtagtctcccactattaa tatatggagtttgatgtgagatttaagctttagtgatgtttcccatgcat ttggagcatatatgttcagaactgagatgtcatcttggtgaatttttcct ttaatgtgtataaagtgttgttccatatctcttttgattaattttggttg aaagcctattttgttagattttagaatggctataccaacttgcttatttg atccattagcttggaaaatctttttccaaccctttactctgaggtaatgt ctacctttgatgttgaggtatatttcctgtatgcaaaaaactgatggatt ctttttcacattgattctattagtctatgtatttttactgggaaattgag tttattgatgttgagtgatagcaatcaaccaaagatggttgattcctgtt attttgatgttggtggtagctgtgtatatgtgtgcttctcttctttggtt ttgctggcatgaaattatttatttcctgtgttttgttgggtgtagttaaa ttccctgggttgggctttccttctagtaccttctgtagtgctggatttgt agatagatattgtttaaatttgggttttattatgggaatatccttgtttc tcattttatgtgaatgaaatttgctgactatagtagtctggcctggcatc tgtgattctcttagaaatctggccagaattattagccattctgactttag agagtccttctggattgggtaccatcgtataataaataggagcgtactac ttgtattatc
quality values	Open. Hide. 47 47 22 38 62 39 22 54 62 54 62 62 47 47 62 39 42 62 62 62 62 62 62 56 62 62 62 59 62 62 62 59 59 59 46 43 54 54 59 59 59 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 54 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 59 59 62 62 59 62 62 62 62 62 59 62 62 62 62 62 42 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 50 58 46 49 52 54 52 58 42 58 52 45 35 58 58 58 41 52 58 58 47 49 58 54 58 58 58 58 58 58 35 58 54 42 58 58 58 58 58 58 58 54 58 58 58 58 58 58 51 50 58 54 58 58 58 52 58 54 53 49 41 46 58 58 58 58 53 53 58 53 58 58 49 50 51 51 58 58 46 58 52 52 52 51 51 58 51 39 47 58 51 54 50 58 41 30 58 58 58 53 51 37 58 27 49 42 51 54 52 58 58 58 54 51 52 53 40 41 58 48 46 37 47 58 50 49 41 58 42 50 58 51 53 53 50 40 43 50 51 53 52 41 54 50 51 35 58 58 58 58 50 50 39 39 58 41 50 39 26 58 58 44 40 54 54 51 40 54 49 40 30 35 40 40 44 54 53 35 40 31 40 54 37 52 32 44 41 39 46 49 54 32 53 53 41 40 52 50 45 42 37 53 54 42 53 52 47 51 53 19 54 54 37 45 42 42 46 25 47 40 32 35 25 40 47 40 54 52 31 54 54 53 53 29 40 35 33 41 26 52 52 49 49 32 31 53 53 53 31 34 26 51 46 32 45 53 31 34 30 31 32 31 32 32 32 31 34 45 37 36 31 31 23 30 36 34 33 25 31 32 20 42 33 13 40 26 31 31 33 40 34 31 23 25 40 26 31 31 31 31 30 41 31 30 29 31 20 25 33 31 31 43 31 26 30 42 25 31 36 34 31 31 36 31 31 23 32 28 32 31 31 25 28 24 31 28 35 31 38 42 21 31 36 34 31 31 31 30 41 31 31 29 36 30 31 31 28 37 30 17 30 31 26 31 31 26 31 44 32 25 46 31 37 48 31 12 29 19 29 48 41 31 19 22 14 29 32 34 34 33 29 28 27 26 11 20 47 47 8 7 8 31 14 32 22 19 29 38 31 25 11 19 7 38 27 18 29 33 29 34 23 31 12 21 20 21 25 28 18 19 16 14 30 21 14 15 25 23 31 21 30 31 23 34 34 13 30 14 34 14 48 43 43 43 47 43 48 33 17 20 22 17 26 12 17 22 43 43 31 7 9 15 47 18 8 9 40 18 11 5 10 31 6 11 13 26 20 15 8 13 14 8 15 11 10 4 6 20 15 14 11 40 40 16 5 12 10 7 10 8 20 3 4 12 10 32 6 17 7 14 3 3 3 4 8 6 6 5 6 14 30 30 11 8 5 27 28 16 4 6 19 16 28 21 5 4 23 7 27 12 9 14 28 9 8 8 16 28 14 8 10 7 21 6 8 7 14 7 13 23 9 7 5 2 3 3 9 7 5 7 18 8 7 7 7 11 16 5 6 3 1 2 5 19 9 16 8 12 8 13 4 6 10 10 2 3 1 4 11 7 12 4 5 21 4 4 6 6 18 7 4 5 10 8 7 10 9 5 8 4 2 3 6 6 4 6 6 25 9 7 4	Open. Hide. 62 47 56 39 62 62 62 54 62 54 51 51 56 36 56 56 62 62 62 62 62 62 62 62 62 62 59 43 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 59 62 62 62 62 62 62 62 59 59 59 62 62 62 54 59 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 59 59 59 62 62 62 62 59 62 62 62 62 62 62 54 62 59 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 54 49 54 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 54 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 44 49 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 54 58 54 58 58 58 58 58 58 49 58 58 58 58 58 58 58 58 58 58 58 58 54 58 54 58 54 58 58 58 58 54 54 58 58 58 58 58 54 58 58 58 54 58 58 58 58 58 54 58 54 51 58 41 58 58 58 53 53 58 51 49 58 58 51 58 51 58 52 58 45 49 58 58 58 58 58 58 58 47 53 53 58 58 58 58 58 58 41 37 51 53 53 53 58 58 49 58 54 58 58 58 51 41 54 49 58 58 58 51 53 47 22 58 50 58 58 58 58 49 37 50 54 51 58 51 32 15 32 37 50 50 47 58 50 54 51 40 28 58 49 58 54 50 38 41 54 42 51 49 54 34 54 37 40 52 53 53 54 49 51 54 47 54 49 42 50 51 50 25 54 54 54 54 47 40 52 54 39 33 49 54 31 32 47 53 42 54 54 36 54 40 37 45 37 51 47 46 39 37 52 52 38 38 40 47 37 33 53 54 37 44 40 51 34 33 31 53 53 53 52 42 41 42 40 46 38 33 53 52 29 51 36 40 31 53 51 32 40 42 35 43 39 39 41 31 45 31 51 30 42 45 30 24 31 32 42 31 38 38 37 29 45 31 33 31 51 40 31 37 30 31 46 26 38 31 31 31 31 31 42 31 46 24 31 31 42 46 46 37 31 31 25 41 28 38 43 42 25 25 46 23 42 26 43 31 42 31 42 32 31 31 31 31 42 31 38 31 36 41 27 31 31 31 43 33 33 39 30 46 30 31 33 28 47 47 34 31 31 21 14 32 23 23 37 31 35 48 41 25 33 31 35 48 36 32 34 48 31 21 25 31 28 18 35 34 48 47 32 31 19 33 31 47 35 19 38 24 38 21 25 13 33 48 30 14 30 32 48 37 31 32 40 34 22 23 31 43 32 33 37 48 27 24 30 9 19 19 18 32 18 31 27 20 25 18 11 32 22 31 23 29 9 8 26 21 30 27 22 30 22 48 22 29 22 32 18 23 13 28 19 14 8 11 6 19 25 10 28 15 7 31 17 18 40 14 8 30 9 25 34 38 20 28 18 16 27 16 16 34 10 28 28 19 17 20 15 14 5 9 14 25 47 19 18 6 22 8 8 40 26 10 8 28 15 8 20 10 6 27 10 14 29 14 11 26 20 21 20 23 16 25 16 7 13 8 7 6 5 22 15 9 23 21 23 16 4 8 13 10 15 7 10 11 18 8 17 7 18 18 11 5 4 5 7 7 12 16 9 15 30 15 12 15 8 8 6 9 21 4 4 13 11 12 15 16 6 11 2 3 2 3 1 5 10 16 6 5 1 2 22 17 15 16 5 4 5 10 4 1 4 12 3 5 1 3 4 3 9 6 7 16 27 12 3 5 6 5 3 2 2 1 2 2 6 5 10 6 7 21 20 6 16 13 24 4 6 3 2 1 5 7 7 9 6 3 1 1 2 2 6 4 2 5 2

Alignment Information

BAC End 1

BAC End 2

seq1: chr3_56295285_56296480
seq2: B6Ng01-320C03.b_44_1238

seq1  GAATTCACCTACTAACACGTACTAAAATTGGAAATGAACAAAGATCGAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTACTAACACGTACTAAAATTGGAAATGAACAAAGATCGAGC  50

seq1  TAAATCTTTTTGTGCATGTATCTGTGCATTGTGTGCACATGTGTGTATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCTTTTTGTGCATGTATCTGTGCATTGTGTGCACATGTGTGTATAG  100

seq1  TGCAGCAGCATCATGAGCCTGAAGTGACTGATAGTGATGTCTTAAAGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCAGCATCATGAGCCTGAAGTGACTGATAGTGATGTCTTAAAGATG  150

seq1  ATAAGATGATGATGATAATCATGACATAAATGTGGCATTTGAACCCAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGATGATGATGATAATCATGACATAAATGTGGCATTTGAACCCAACC  200

seq1  AAGCTGTTTCTCACATTTTACTTCATTCTTTGCCTGTTACCCTTAGTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGTTTCTCACATTTTACTTCATTCTTTGCCTGTTACCCTTAGTGCT  250

seq1  GTCTCATATATTTTAGACTTCCATTGCTGCAACATTCCATCGCTGCTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCATATATTTTAGACTTCCATTGCTGCAACATTCCATCGCTGCTCCC  300

seq1  TGCCATTAGCGTCCTGCTCCATCGCACTCTTGGAGAATATCAACTGCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATTAGCGTCCTGCTCCATCGCACTCTTGGAGAATATCAACTGCCCT  350

seq1  GTGAATTGACCCTGCAATTATGACCATGTGCTTTAGGAAAGTTTCTGCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATTGACCCTGCAATTATGACCATGTGCTTTAGGAAAGTTTCTGCAC  400

seq1  GTTATAAACACATCAGTGAGCCAGCGGATGTGATAATGATAAAATTACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAAACACATCAGTGAGCCAGCGGATGTGATAATGATAAAATTACAC  450

seq1  TGTCTTGCTTTCAGCAGTTTGCTGAAAGTCACTCACAAGGGAATGCTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTGCTTTCAGCAGTTTGCTGAAAGTCACTCACAAGGGAATGCTTCT  500

seq1  TGGTCTAAGGGCAAATTTCTTGGTCACCAGTTCTTATAGTGACTGAAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTAAGGGCAAATTTCTTGGTCACCAGTTCTTATAGTGACTGAAACT  550

seq1  CTGAGAGGCAGAGAGATTGGATCCCAAGGGGTGATGATCCCTGCATTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGGCAGAGAGATTGGATCCCAAGGGGTGATGATCCCTGCATTTGT  600

seq1  CTTAACTTGCATTAATTCTGTAAGAAATAGAAGCATAATATTAATAGGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACTTGCATTAATTCTGTAAGAAATAGAAGCATAATATTAATAGGAC  650

seq1  CCTCAGAGGTTCTTTTGCTCATTGAATTTAGATAAATTATTAATATTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGAGGTTCTTTTGCTCATTGAATTTAGATAAATTATTAATATTCCT  700

seq1  TTTTTCTAAACTAAAATTTTCCCTGGCTGGAGATTGTCAAGTTGAGCACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTAAACTAAAATTTTCCCTGGCTGGAGATTGTCAAGTTGAGCACT  750

seq1  AATATGCCTTGAAGGGTATAAGCAGACACAAAGGGAAGTAGATTTTTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGCCTTGAAGGGTATAAGCAGACACAAAGGGAAGTAGATTTTTTAA  800

seq1  AAATCCCGTTTATATGCCACGACACACCATTCCAGGAGCATGGGGACAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCCGTTTATATGCCACGACACACCATTCCAGGAGCATGGGGACAAT  850

seq1  TCTGCTCTGACAACATCATGTTACTCTACATATAACCTTAACTGTGCAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCTGACAACATCATGTTACTCTACATATAACCTTAACTGTGCAGC  900

seq1  ATGTGTGTGCATAATGTGCGTTTGGGAAAGGCAAAACCACTACTTACCAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGTGCATAATGTGCGTTTGGGAAAGGCAAAACCACTACTTACCAT  950

seq1  TTTAGGGAACATCTAGGACCACTCTGTATAGATATAGACATTCACT-GGG  999
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTTAGGGAACATCTAGGACCACTCTGTATAGATATAGACATTCACTGGGG  1000

seq1  TTC-TTTTTTTTCCATTAA-TTTTATTTATTTACTTTATGTCTGGATTAC  1047
      ||| ||||||||||||||| |||||||||||||||||||||||||| |||
seq2  TTCTTTTTTTTTCCATTAATTTTTATTTATTTACTTTATGTCTGGA-TAC  1049

seq1  AGCTTCCCCTTCCTCTTCTCCTCCTAGTCCTTTCCT-CTCCCCTCCCCTG  1096
      ||||||||||||||| ||||   ||||||  ||||| |||||||||||||
seq2  AGCTTCCCCTTCCTC-TCTC--TCTAGTC--TTCCTCCTCCCCTCCCCTG  1094

seq1  ACCCCATTCCCACCCACTTTCT-CCTCAG--AGGAGGGAAGATCTCCCAT  1143
      | |||| ||||||||||||||| ||||||  |||||  |  |||  ||||
seq2  A-CCCAATCCCACCCACTTTCTCCCTCAGAAAGGAGAAAGAATCCTCCAT  1143

seq1  GGATAGCTACCTGCCTTGGCATATCAAGTTGCAGTAGGACTACTTA-TGT  1192
      | ||||||||||||||  ||  ||| || ||||||||||||||||| |||
seq2  GCATAGCTACCTGCCT--GCCAATCCAGGTGCAGTAGGACTACTTAGTGT  1191

seq1  TTTC  1196
      ||||
seq2  TTTC  1195

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information