BAC Information

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BAC

Clone NameB6Ng01-320D18
Chromosome3 (Build37)
Map Location 15,668,192 - 15,669,256
singlet/doubletsinglet
Overlap genenone
Upstream geneEG545507, Car1, LOC100041785, Car3, Car2, EG634323, LOC100039985, LOC751864, Sirpb1, LOC668101
Downstream geneLOC100038947, LOC622425, LOC664795, LOC381484, Ythdf3, LOC100040034
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320D18.bB6Ng01-320D18.g
ACCGA109656GA109657
length1,2021,068
definitionB6Ng01-320D18.b B6Ng01-320D18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcgttcagctctgagccccatcttttatgggggttatttgatt
ttctggagtccactctcttgagttctttatatatattggatattagtcag
ctatctgatttatgttctatggtcctgtctgaattcttagggcctaatga
agaaacctgtctcagtgggattccctaacttttctcatggtaaaccctta
tttggttaagactgtcctttctgtcctagtaaacattttgcagactagcc
ctgagctgttggctctgtcctttgtaatgttagttttgttactgaatagg
taacttcctcgcttaatttctactgaaatctaagttgtcaccttcacagt
cttagtaggactaggacattggaactctggcgaagacttaactgtatcag
gattcaattttaaaaagtactatagtaagataacactaaaggagagtatg
tggatcctcctcaacagccttgggtgacaggcagggaacagagaggaagg
ggtgacgactggctccttagcacaaggccatttggctttttagggtggga
ggctatgaagggcttgccttttcacggtgtggtctccaaactccccccca
cccccctttgaattaaacttaataaggccacacttaactgaggtgatcaa
atgatcttctcatccttggatgagtgggcattaaccatggctgggggagc
attgacccgattcctcccgtgggtgttatcacgacccacaaacatggctc
ttggtatcttttggggaggggaggcagagccttagaaagatacttttggt
tgtaactggaactagataccaacctccatccaaagcaggtgtgtctctca
gggaactcagaaatggtcaagttggaccttcccctgcaatgcttagcctc
gtacccatgctggtgcccatactgtattcgtattatcacgaaccagcatg
cacagttctgagtactgtgcagctcccaagggagaattgtcaaccctcag
attcagcagggcctctacaagatacgtcactagtaacacccacactttgg
tggctcttaggctatattaggagcctggaggtcatcgttctcatcctata
tttccacaagcttgaggatctagaggatcttgcaataatcagcagggtgc
acctgggaacagctaagaagaccttaagccctgttcttatccgaatttta
ac
gaattcttctcatatgcttcctttcatttgttctttctttcttctctttt
ggagtgaaggattgaaatcatttcctcacatttgttaatttcatgctcac
tattaagttactaacccagccctatttccaccatcatttcttcattgtag
ctacagtaagctattaggatttttggtaatatgttaagtagagaaagaat
aaaaatacatcaaagcagacagaaataaccaaccacccctttgcatctct
atgataaattataatggccaactgtttaaaaggaaaaaaagtctttctta
gctcctgcttgctgaccacatgacttatgactttatgagacacagacaca
gtcagatgtgcagtttacttatttccaaggagattttcattaaaactaat
ttcaaaaccagtaatccctattaggtgacagcagtcaaaactctttattc
tcacctcataaataatgtgttgctttatcttgctgcatataatttgccaa
tatttccagtcttaaaatttcatgtccttaaaatgatcttattgaataga
ttatatatatatatatatatatatatatatacatatatatatatatttta
cctttccatatatatatatatatatatatatatatatatatatatatata
tatatatataacaattgtgcttttatatgtgtgtgcatcagtgtacacac
agggaaacatgatttttaaaaatctttattgtttcttaattttcaatttg
cataatattcacataggactgtagtttcaagttcagtttcaccctgaatt
gtccacccccccccccatttcttatttcctaattcttgaaatgttttaca
ctaagcaaacttttctctcagtaaaataacttttttctcagtaacttctg
caaattactgcccttgaacttccctttgcattgatgagaagaaaaggaga
agtttatgaaggagaatacatattcgttaaattttctagtgtgcatgagt
tttatagcttaggtccttaagtagtttactaaacgcttcagccccatatg
tagcaaaggatggccttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_15668192_15669256
seq2: B6Ng01-320D18.g_63_1130

seq1  GAATTCTTCTCATATGCTTCCTTTCATTTGTTCTTTCTTTCTTCTCTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTCATATGCTTCCTTTCATTTGTTCTTTCTTTCTTCTCTTTT  50

seq1  GGAGTGAAGGATTGAAATCATTTCCTCACATTTGTTAATTTCATGCTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGAAGGATTGAAATCATTTCCTCACATTTGTTAATTTCATGCTCAC  100

seq1  TATTAAGTTACTAACCCAGCCCTATTTCCACCATCATTTCTTCATTGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAGTTACTAACCCAGCCCTATTTCCACCATCATTTCTTCATTGTAG  150

seq1  CTACAGTAAGCTATTAGGATTTTTGGTAATATGTTAAGTAGAGAAAGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGTAAGCTATTAGGATTTTTGGTAATATGTTAAGTAGAGAAAGAAT  200

seq1  AAAAATACATCAAAGCAGACAGAAATAACCAACCACCCCTTTGCATCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATACATCAAAGCAGACAGAAATAACCAACCACCCCTTTGCATCTCT  250

seq1  ATGATAAATTATAATGGCCAACTGTTTAAAAGGAAAAAAAGTCTTTCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAAATTATAATGGCCAACTGTTTAAAAGGAAAAAAAGTCTTTCTTA  300

seq1  GCTCCTGCTTGCTGACCACATGACTTATGACTTTATGAGACACAGACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTGCTTGCTGACCACATGACTTATGACTTTATGAGACACAGACACA  350

seq1  GTCAGATGTGCAGTTTACTTATTTCCAAGGAGATTTTCATTAAAACTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGATGTGCAGTTTACTTATTTCCAAGGAGATTTTCATTAAAACTAAT  400

seq1  TTCAAAACCAGTAATCCCTATTAGGTGACAGCAGTCAAAACTCTTTATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAACCAGTAATCCCTATTAGGTGACAGCAGTCAAAACTCTTTATTC  450

seq1  TCACCTCATAAATAATGTGTTGCTTTATCTTGCTGCATATAATTTGCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTCATAAATAATGTGTTGCTTTATCTTGCTGCATATAATTTGCCAA  500

seq1  TATTTCCAGTCTTAAAATTTCATGTCCTTAAAATGATCTTATTGAATAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCAGTCTTAAAATTTCATGTCCTTAAAATGATCTTATTGAATAGA  550

seq1  TTATATATATATATATATATATATATATATACATATATATATATATTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATATATATATATATATATATATATATACATATATATATATATTTTA  600

seq1  CCTTTCCATATATATATATATATATATATATATATATATATATATATATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCATATATATATATATATATATATATATATATATATATATATATA  650

seq1  TATATATATAACAATTGTGCTTTTATATGTGTGTGCATCAGTGTACACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATAACAATTGTGCTTTTATATGTGTGTGCATCAGTGTACACAC  700

seq1  AGGGAAACATGATTTTTAAAAATCTTTATTGTTTCTTAATTTTCAATTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAACATGATTTTTAAAAATCTTTATTGTTTCTTAATTTTCAATTTG  750

seq1  CATAATATTCACATAGGACTGTAGTTTCAAGTTCAGTTTCACCCTGAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATATTCACATAGGACTGTAGTTTCAAGTTCAGTTTCACCCTGAATT  800

seq1  GTCCA-CCCCCCCCCCATTTCTTATTTCCTAATTCTTGAAATG-TTTACA  848
      ||||| ||||||||||||||||||||||||||||||||||||| ||||||
seq2  GTCCACCCCCCCCCCCATTTCTTATTTCCTAATTCTTGAAATGTTTTACA  850

seq1  CTAAGCAAACTTTTCTCTCAGTAAAATAAC-TTTTTCTCAGTAACTTCTG  897
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTAAGCAAACTTTTCTCTCAGTAAAATAACTTTTTTCTCAGTAACTTCTG  900

seq1  CAAATTACTG-CCTTGAACTTCCC-TTGCATTGATGAGAAG-AAAGGAGA  944
      |||||||||| ||||||||||||| |||||||||||||||| ||||||||
seq2  CAAATTACTGCCCTTGAACTTCCCTTTGCATTGATGAGAAGAAAAGGAGA  950

seq1  AG-TTATGAAGGGAGAATACATATTCG-TAAATTTTCTAGTGTGCCATGA  992
      || ||||||| |||||||||||||||| |||||||||||||||| |||||
seq2  AGTTTATGAA-GGAGAATACATATTCGTTAAATTTTCTAGTGTG-CATGA  998

seq1  GTTTTAATAGC-TAGGTCCTTAAAGTAGGTTTACTAAACGGCTCCAGCCC  1041
      ||||| ||||| ||||||||| ||||| ||||||||||| ||| ||||||
seq2  GTTTT-ATAGCTTAGGTCCTT-AAGTA-GTTTACTAAAC-GCTTCAGCCC  1044

seq1  CATATGTAGCAGAGGATGGCCTTG  1065
      ||||||||||| ||||||||||||
seq2  CATATGTAGCAAAGGATGGCCTTG  1068