BAC Information

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BAC

Clone NameB6Ng01-320I15
Chromosome3 (Build37)
Map Location 71,089,307 - 71,090,392
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041384, LOC625868, LOC670542, EG625901
Downstream geneEG667377, LOC667385, LOC100041459
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320I15.bB6Ng01-320I15.g
ACCGA109881GA109882
length1,1061,082
definitionB6Ng01-320I15.b B6Ng01-320I15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatcaagacaggatctatggtaagtactttctccaaggttgccaa
atgcggaggaactggatattatgaatgcaatattaatagtgtgaacctga
tagtgttttacaattgttgttattttatataatttattaattttatagaa
atagccttttattggtctgaaagcagagctgttaggatagtctcttgttc
actgagcaaaaccacctgtcaataaagagctatataagctatagcaatgc
ttgagaactgtgggacaatggactttgtacagacaggctggtctccagtc
tagttgaggtctaaaccccagagaaatgtggtagtaataatattcaccta
cataggatagaaggtgtcccctcatgtttcctagacccctggctccagtc
gaagttaccacccccacagtccccacaggagaagctcatggctttcaatc
attgtgtatacaatgtcccaagcttctgaccttcaggctagactcctccc
agttacctaggaacaacaacatcacaagcccactatataagaggggttgc
ttggtccttccttgctctcttaagcttttactttccttactctccctccc
tcccccctctctaagccctctctctctctcttaagctttcacctttctcg
ctctctctttttttccttttcccttcccccttctctcctcttggccatgg
ctggtctctctctctctttctaccttttctctttccctctgcctttctac
aataaagttctaaaactatagaatgtctctgttcatcaaggcccattgtg
cttggatcatgcgatgggctttctcctaatgagctgtgcataatcttcca
tcagaaggccttcctgtgctccagtcatggactggactaaaggactctca
cctgcatggcaacccctctccttttgccctcttcccatatccccaggacc
tctattctgttctcagctcctctgccatatccagcaggggatgcccagag
actgagatcttatatggggggctgcccttggtccaacccccccaacccca
agtgtgggatcagtgctaacaagccgatgccacctgggacgagtgtaaaa
tgtctg

gaattctttgagataatcagtttaacgtgggaaatacccaaagacttatt
aagaaagtatttatcattaatagattttaaaaaataaatgaaagggatag
gcattttggttaggcatggagaatttatcaaaaggagtctttgaactgaa
ccaggtataataatatacagacataaagaaagattctgggtattgagttt
ggactttatgtttcagaaactttaattttaaagaaaattctatttaccac
agtatctaggtttgaaaaataaaatgaaacaaatgataaaaataaaagat
gacaaagcaacaaataagaaaaatgactagtgatatttgcataacataaa
tgatatctacaattatgtagttgttgataaccattttgacctagccatag
tacactaaatcttcagagcaggtctactgacccaaatgatgagacctgca
ggttatttaaacaggaatgtccatatgacacagtttatttgtgaatatgc
aagtacattttttggaaatacaagactaaatggtttcagacaaattattc
attggttttcagatagagtgagctcaaacacacacacacattgccataaa
tctcccaaatatgccctggcaatgaaaacacgacacagttaatatgatta
catgctgcacgcctagattcgacagatctgccactacactaccatcttcc
acagcttatgagaccccttagaacttgtggtttctccaggccatgtgctc
ctgctctgcttttctccttcttcctcttcctctgtgtcctctccctcttc
cattttctctttcttctccccctctccttctgctccaccttcccttttat
ctgcccaatcatcagctctcctttattttacaaattaaggtgggaaacag
gtttacaggaaatcacctgagtgctgactcattcctcattcacagccact
cacaggagatggattacatcaaatgtatacactaggctaatcaccaccac
acacacacacacacacacacacacacacacaccacacaccttacacagga
cccatacacactcaggactgctagagagagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_71089307_71090392
seq2: B6Ng01-320I15.g_66_1147

seq1  GAATTCTTTGAGATAATCAGTTTAACGTGGGAAATACCCAAAGACTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGAGATAATCAGTTTAACGTGGGAAATACCCAAAGACTTATT  50

seq1  AAGAAAGTATTTATCATTAATAGATTTTAAAAAATAAATGAAAGGGATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGTATTTATCATTAATAGATTTTAAAAAATAAATGAAAGGGATAG  100

seq1  GCATTTTGGTTAGGCATGGAGAATTTATCAAAAGGAGTCTTTGAACTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTGGTTAGGCATGGAGAATTTATCAAAAGGAGTCTTTGAACTGAA  150

seq1  CCAGGTATAATAATATACAGACATAAAGAAAGATTCTGGGTATTGAGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTATAATAATATACAGACATAAAGAAAGATTCTGGGTATTGAGTTT  200

seq1  GGACTTTATGTTTCAGAAACTTTAATTTTAAAGAAAATTCTATTTACCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTTATGTTTCAGAAACTTTAATTTTAAAGAAAATTCTATTTACCAC  250

seq1  AGTATCTAGGTTTGAAAAATAAAATGAAACAAATGATAAAAATAAAAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCTAGGTTTGAAAAATAAAATGAAACAAATGATAAAAATAAAAGAT  300

seq1  GACAAAGCAACAAATAAGAAAAATGACTAGTGATATTTGCATAACATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAGCAACAAATAAGAAAAATGACTAGTGATATTTGCATAACATAAA  350

seq1  TGATATCTACAATTATGTAGTTGTTGATAACCATTTTGACCTAGCCATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATCTACAATTATGTAGTTGTTGATAACCATTTTGACCTAGCCATAG  400

seq1  TACACTAAATCTTCAGAGCAGGTCTACTGACCCAAATGATGAGACCTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTAAATCTTCAGAGCAGGTCTACTGACCCAAATGATGAGACCTGCA  450

seq1  GGTTATTTAAACAGGAATGTCCATATGACACAGTTTATTTGTGAATATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATTTAAACAGGAATGTCCATATGACACAGTTTATTTGTGAATATGC  500

seq1  AAGTACATTTTTTGGAAATACAAGACTAAATGGTTTCAGACAAATTATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACATTTTTTGGAAATACAAGACTAAATGGTTTCAGACAAATTATTC  550

seq1  ATTGGTTTTCAGATAGAGTGAGCTCAAACACACACACACATTGCCATAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTTTTCAGATAGAGTGAGCTCAAACACACACACACATTGCCATAAA  600

seq1  TCTCCCAAATATGCCCTGGCAATGAAAACACGACACAGTTAATATGATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCAAATATGCCCTGGCAATGAAAACACGACACAGTTAATATGATTA  650

seq1  CATGCTGCACGCCTAGATTCGACAGATCTGCCACTACACTACCATCTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTGCACGCCTAGATTCGACAGATCTGCCACTACACTACCATCTTCC  700

seq1  ACAGCTTATGAGACCCCTTAGAACTTGTGGTTTCTCCAGGCCATGTGCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTATGAGACCCCTTAGAACTTGTGGTTTCTCCAGGCCATGTGCTC  750

seq1  CTGCTCTGCTTTTCTCCTTCTTCCTCTTCCTCTGTGTCCTCTCCCTCTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTGCTTTTCTCCTTCTTCCTCTTCCTCTGTGTCCTCTCCCTCTTC  800

seq1  CATTTTCTCTTTCTTCTCCCCCTCTCCTTCTGCTCCACCTTCCCTTTTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTCTTTCTTCTCCCCCTCTCCTTCTGCTCCACCTTCCCTTTTAT  850

seq1  CTGCCCAATCATCAGCTCTCCTTTATTTTACAAATTAAGGTGGGAAACAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCAATCATCAGCTCTCCTTTATTTTACAAATTAAGGTGGGAAACAG  900

seq1  GTTTACAGGAAATCACCTGAGTGCTGACTCATTCCTCATTCACAGCCACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACAGGAAATCACCTGAGTGCTGACTCATTCCTCATTCACAGCCACT  950

seq1  CACAGGAGAATGGAATTAACATCAAATGTAATTAACACTAGGGCTATTCA  1000
      |||||||| |||||  | ||||||||||||    |||||| ||||| |||
seq2  CACAGGAG-ATGGA--TTACATCAAATGTA---TACACTA-GGCTAATCA  993

seq1  CAACACACACACACACACACACACACACACACACACACA-CACACA-CTT  1048
      | || |||||||||||||||||||||||||||||||||| |||||| |||
seq2  CCAC-CACACACACACACACACACACACACACACACACACCACACACCTT  1042

seq1  ACACA-GACACATACACACTCA-GACACACAGAGAGAGAC  1086
      ||||| ||| |||||||||||| |||    ||||||||||
seq2  ACACAGGACCCATACACACTCAGGACTGCTAGAGAGAGAC  1082


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