BAC Information

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BAC

Clone NameB6Ng01-323C01
Chromosome3 (Build37)
Map Location 18,043,944 - 18,045,089
singlet/doubletsinglet
Overlap geneCyp7b1
Upstream geneLOC100040059, EG383936, LOC622737, ENSMUSG00000074674, LOC100040120, Cypt12, LOC545508, Bhlhb5
Downstream geneLOC622921, LOC100040153, Armc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323C01.bB6Ng01-323C01.g
ACCGA111788GA111789
length1,134410
definitionB6Ng01-323C01.b B6Ng01-323C01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaggaaacttcaggtctctattcctgttgatgggtaagttttt
tctaagttgtctatcagacttcttgttttcagctctagtggaccattgtc
aaccaccaataggcaatatttcagaggaactcctgcatgaaggtgcagtt
ttaaggactagggttataatcagagagaggaacgaaaactgcagtctctt
gaatgaacactttctggcctctcaggatctggcatcacaggtatataata
ctcgaatacaccctcttatctgtacttgttgagctaggcagctactctag
aaatgtaaactcagtgatattctcctttgaatggtcctgtatgacctgtg
ttttatatatagggtcagaccacctaatacaaaacctctgaaggacctat
tcaaatgctcatggctgaactaaaatttcatcctactaaaaatatggaac
aaacatattgtgtctggactatggcttatacattttcttaatttatggtt
tggcacatagtagacactcaataaatatttattaaataaattaatcatag
aacacccataatggctcatttgtgatatgttaatggtatataaaaatcgc
agtaatatatattcaatttcagcttgattcttttgcattcttaattcagt
tcatggtcgtctgttgccatttcttttgactactgcactgcattaaagca
gtgcttttttcccccaagcttccaatttaaatgtgctagctaaattccta
ttaattccattccaagtatttgcacagaactgatccaccatagccgcctg
ctaatgatgcatctgtcattttattgacacccctaaacagctttattctc
ctttctaattaagagacaaaactggtattgtcagttgatgaaccgacatg
tgggggcttttgttccaatgtagaagcaacacataatgatgctaaaacaa
aaaattcagtaatcctaaccaaaaagctcactagacaaatctatttacac
gtatttaaatgaagcttgttattactaatggaaataaagatttgtgatta
ccggaaaatatacatggtgacagcatgcttgctgaccaatatgctaccaa
atccataacctcggacagtagtctcagattactc

ttgatcttcccaatgcatttatcatgaatgggtattggattttgttaaat
gctttctcagcatctaatgagatgatcatgtggtttttgtatttgaggtt
gtttatatagtgtattagtttgatggatttctgtgtggtaaaccgtccct
gcatccctcgaatgaagcctacttgatcatgataaatgatcatttttatg
tgttcttggattcagttaggaggaattttatagagtatttttgaattgat
attcataagggaaattgttctctttcagtgttgggtctttttgtggttta
aatatcaaaaataattgtggctgcctagaatgaattgataaaggaccttc
tgtttcttatttatctactcgtttgaggagaattggaattacgtcttctt
tgaaaagtcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_18043944_18045089
seq2: B6Ng01-323C01.b_48_1181

seq1  GAATTCAAAGGAAACTTCAGGTCTCTATTCCTGTTGATGGGTAAGTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGGAAACTTCAGGTCTCTATTCCTGTTGATGGGTAAGTTTTT  50

seq1  TCTAAGTTGTCTATCAGACTTCTTGTTTTCAGCTCTAGTGGACCATTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGTTGTCTATCAGACTTCTTGTTTTCAGCTCTAGTGGACCATTGTC  100

seq1  AACCACCAATAGGCAATATTTCAGAGGAACTCCTGCATGAAGGTGCAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACCAATAGGCAATATTTCAGAGGAACTCCTGCATGAAGGTGCAGTT  150

seq1  TTAAGGACTAGGGTTATAATCAGAGAGAGGAACGAAAACTGCAGTCTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGACTAGGGTTATAATCAGAGAGAGGAACGAAAACTGCAGTCTCTT  200

seq1  GAATGAACACTTTCTGGCCTCTCAGGATCTGGCATCACAGGTATATAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAACACTTTCTGGCCTCTCAGGATCTGGCATCACAGGTATATAATA  250

seq1  CTCGAATACACCCTCTTATCTGTACTTGTTGAGCTAGGCAGCTACTCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAATACACCCTCTTATCTGTACTTGTTGAGCTAGGCAGCTACTCTAG  300

seq1  AAATGTAAACTCAGTGATATTCTCCTTTGAATGGTCCTGTATGACCTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAAACTCAGTGATATTCTCCTTTGAATGGTCCTGTATGACCTGTG  350

seq1  TTTTATATATAGGGTCAGACCACCTAATACAAAACCTCTGAAGGACCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATATATAGGGTCAGACCACCTAATACAAAACCTCTGAAGGACCTAT  400

seq1  TCAAATGCTCATGGCTGAACTAAAATTTCATCCTACTAAAAATATGGAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGCTCATGGCTGAACTAAAATTTCATCCTACTAAAAATATGGAAC  450

seq1  AAACATATTGTGTCTGGACTATGGCTTATACATTTTCTTAATTTATGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATATTGTGTCTGGACTATGGCTTATACATTTTCTTAATTTATGGTT  500

seq1  TGGCACATAGTAGACACTCAATAAATATTTATTAAATAAATTAATCATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACATAGTAGACACTCAATAAATATTTATTAAATAAATTAATCATAG  550

seq1  AACACCCATAATGGCTCATTTGTGATATGTTAATGGTATATAAAAATCGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCCATAATGGCTCATTTGTGATATGTTAATGGTATATAAAAATCGC  600

seq1  AGTAATATATATTCAATTTCAGCTTGATTCTTTTGCATTCTTAATTCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATATATATTCAATTTCAGCTTGATTCTTTTGCATTCTTAATTCAGT  650

seq1  TCATGGTCGTCTGTTGCCATTTCTTTTGACTACTGCACTGCATTAAAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGTCGTCTGTTGCCATTTCTTTTGACTACTGCACTGCATTAAAGCA  700

seq1  GTGCTTTTTTCCCCCAAGCTTCCAATTTAAATGTGCTAGCTAAATTCCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTTTTTCCCCCAAGCTTCCAATTTAAATGTGCTAGCTAAATTCCTA  750

seq1  TTAATTCCATTCCAAGTATTTGCACAGAACTGATCCACCATAGCCGCCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTCCATTCCAAGTATTTGCACAGAACTGATCCACCATAGCCGCCTG  800

seq1  CTAATGATGCATCTGTCATTTTATTGACACCCCTAAACAGCTTTATTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGATGCATCTGTCATTTTATTGACACCCCTAAACAGCTTTATTCTC  850

seq1  CTTTCTAATTAAGAGACAAAACTGGTATTGTCAGTTGATGAACCGACATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTAATTAAGAGACAAAACTGGTATTGTCAGTTGATGAACCGACATG  900

seq1  TGGGGGCTTTTGTTCCAATGTAGAAGCAACACATAATGATGCTAAAACAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGCTTTTGTTCCAATGTAGAAGCAACACATAATGATGCTAAAACAA  950

seq1  AAAATTCAGTAATCCTAACCAAAAAGCTCACTAGACAAAATCTATTTACA  1000
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AAAATTCAGTAATCCTAACCAAAAAGCTCACTAGAC-AAATCTATTTACA  999

seq1  CGTATTTTAAATGAAGCTTGTTATTAACCTAATGGAAATACAGA-TTGTG  1049
      |||| |||||||||||||||||||||  |||||||||||| ||| |||||
seq2  CGTA-TTTAAATGAAGCTTGTTATTA--CTAATGGAAATAAAGATTTGTG  1046

seq1  AATTACAGGAAAAATATACATGGTGACAGCATGCGTGCTGAACAATATGC  1099
       ||||| || |||||||||||||||||||||||| |||||| ||||||| 
seq2  -ATTACCGG-AAAATATACATGGTGACAGCATGCTTGCTGACCAATATG-  1093

seq1  CTACCCAAAATCCCATTAAACTCAGAACCAAGTAGTCTCAG-TTACTC  1146
      |||||  ||||||   ||| ||| ||    ||||||||||| ||||||
seq2  CTACC--AAATCC--ATAACCTCGGA---CAGTAGTCTCAGATTACTC  1134


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