BAC Information

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BAC

Clone NameB6Ng01-323O23
Chromosome3 (Build37)
Map Location 120,602,314 - 120,727,160
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream gene2510027J23Rik, LOC435752, Tmem56, LOC668778, LOC668780, Alg14, Ppia-ps3_1234.1, Cnn3, Slc44a3, A730020M07Rik, 4930432M17Rik, F3, Abcd3, LOC100043298, Arhgap29
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323O23.bB6Ng01-323O23.g
ACCGA112381GA112382
length1,111536
definitionB6Ng01-323O23.b B6Ng01-323O23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,602,314 - 120,603,426)(120,726,619 - 120,727,160)
sequence
gaattctttaaaccattgtctgaagtgcagtgtctctaaacccatcccca
gaatttgagccagcagtggtccctggagaagcaggagcacctgctcgcat
ccttagaaagcaggacaagttgtcactgtcatactggctgcatgtcctga
ttccagcatgttccttcaggaactgtttggaacagtaatttggacccatt
aatgactacgatctcagaagcccttttctgatcttaagatctgctcttct
tggctcttgaagcaataaaaataatgcacaattggggactacacattttc
agaagcaaaggctccttgagatagcctaaaattaaaccaatggccatttc
gcataaactcaagcacataagtgtctaatctggcttcttacactgttttc
gttttgtgcagtgttcacctcagagaaatgattcgccctcagcttccctt
tcccaactttgtccctccttcatcgttctctccctcgaacctcactgaac
agctattacggtactctgtctacttgtacccaggtcatgagttttgtttg
aaaaacatcaataacgaacatctaccaacaaatgattactatatcccaaa
ctcttttcaacatttcctatgcacgagtagtattcatcaatattaatagg
ccttgtgttgctatgataaaatgccagaaactgcatcatttataaagagc
aaaagcttatttcttaatagttctagtggctaggaagcccactgaagggt
tggaatctgcccagtacctctttgttctattatcccatcagaagatcagt
gagcagaaagccttttcaatggtgatgatcccactgaccccttaaagggc
tcatgtttcaccctgagttcatgaaacattcaagacccaaaacagtgcca
tcattccaattaactggttaagaactgagacacaaaaagatgaagcaact
tgctcacagtctcaaggctagtgaaggaccaatagcttctcagagctagc
catttggtgcagaggccagtactcagaagctatgctgtcttctggagcca
gggtatttttcgtcgcatgttgatgagtgggcatattatcaactcccact
ttgctttgagt

cagtgtcttgtcaacttggctcccgattcagcatctgaatggggggtggt
ggtggcgggggacaggctttgaaacatacatcagcgggctcaggggatgg
ctctgttggtacagtgcttgtcatacacactggaggatttgaatttgagc
cccagagcctgcattggaaagctgggtgtggcaaggtgcttgaagtgata
gaactggggaagtaaagacaagaggatcctgggagttgctggccaggctc
tcctcccagtgagagagtccatctccaacacaaggtgatgactcctaagg
aaagtgacttgaagttgccctctggcagcaaggttttgtcaatagagtga
ctttaggccagtcctgagtttgatcccagagaaggtttcttagggttcga
atgctggcttctgagtaaggtaccgctcttcattccattgttccagaaaa
tgcattgtcattattattattttattatatgtgtgtgtgtgtctgttttc
taatgaaagagagaggtgggtgttgtgtggattcgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_120602314_120603426
seq2: B6Ng01-323O23.b_46_1156

seq1  GAATTCTTTAAACCATTGTCTGAAGTGCAGTGTCTCTAAACCCATCCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAACCATTGTCTGAAGTGCAGTGTCTCTAAACCCATCCCCA  50

seq1  GAATTTGAGCCAGCAGTGGTCCCTGGAGAAGCAGGAGCACCTGCTCGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGAGCCAGCAGTGGTCCCTGGAGAAGCAGGAGCACCTGCTCGCAT  100

seq1  CCTTAGAAAGCAGGACAAGTTGTCACTGTCATACTGGCTGCATGTCCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGAAAGCAGGACAAGTTGTCACTGTCATACTGGCTGCATGTCCTGA  150

seq1  TTCCAGCATGTTCCTTCAGGAACTGTTTGGAACAGTAATTTGGACCCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGCATGTTCCTTCAGGAACTGTTTGGAACAGTAATTTGGACCCATT  200

seq1  AATGACTACGATCTCAGAAGCCCTTTTCTGATCTTAAGATCTGCTCTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACTACGATCTCAGAAGCCCTTTTCTGATCTTAAGATCTGCTCTTCT  250

seq1  TGGCTCTTGAAGCAATAAAAATAATGCACAATTGGGGACTACACATTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCTTGAAGCAATAAAAATAATGCACAATTGGGGACTACACATTTTC  300

seq1  AGAAGCAAAGGCTCCTTGAGATAGCCTAAAATTAAACCAATGGCCATTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCAAAGGCTCCTTGAGATAGCCTAAAATTAAACCAATGGCCATTTC  350

seq1  GCATAAACTCAAGCACATAAGTGTCTAATCTGGCTTCTTACACTGTTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAAACTCAAGCACATAAGTGTCTAATCTGGCTTCTTACACTGTTTTC  400

seq1  GTTTTGTGCAGTGTTCACCTCAGAGAAATGATTCGCCCTCAGCTTCCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTGCAGTGTTCACCTCAGAGAAATGATTCGCCCTCAGCTTCCCTT  450

seq1  TCCCAACTTTGTCCCTCCTTCATCGTTCTCTCCCTCGAACCTCACTGAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAACTTTGTCCCTCCTTCATCGTTCTCTCCCTCGAACCTCACTGAAC  500

seq1  AGCTATTACGGTACTCTGTCTACTTGTACCCAGGTCATGAGTTTTGTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATTACGGTACTCTGTCTACTTGTACCCAGGTCATGAGTTTTGTTTG  550

seq1  AAAAACATCAATAACGAACATCTACCAACAAATGATTACTATATCCCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACATCAATAACGAACATCTACCAACAAATGATTACTATATCCCAAA  600

seq1  CTCTTTTCAACATTTCCTATGCACGAGTAGTATTCATCAATATTAATAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTCAACATTTCCTATGCACGAGTAGTATTCATCAATATTAATAGG  650

seq1  CCTTGTGTTGCTATGATAAAATGCCAGAAACTGCATCATTTATAAAGAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTGTTGCTATGATAAAATGCCAGAAACTGCATCATTTATAAAGAGC  700

seq1  AAAAGCTTATTTCTTAATAGTTCTAGTGGCTAGGAAGCCCACTGAAGGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTTATTTCTTAATAGTTCTAGTGGCTAGGAAGCCCACTGAAGGGT  750

seq1  TGGAATCTGCCCAGTACCTCTTTGTTCTATTATCCCATCAGAAGATCAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATCTGCCCAGTACCTCTTTGTTCTATTATCCCATCAGAAGATCAGT  800

seq1  GAGCAGAAGGCCTTTTCAATGGTGATGATCCCACTGACCCCTTAAAGGGC  850
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGAAAGCCTTTTCAATGGTGATGATCCCACTGACCCCTTAAAGGGC  850

seq1  TCATGTTTCACCCTGAGTTCATGAAACATTCAAGACCCAAAACAGTGCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTTTCACCCTGAGTTCATGAAACATTCAAGACCCAAAACAGTGCCA  900

seq1  TCATTCCAATTAACTGGTTAAGAAACTGAGACACAAAAAGATGAAGCAAC  950
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TCATTCCAATTAACTGGTTAAG-AACTGAGACACAAAAAGATGAAGCAAC  949

seq1  TTGCTCACAGTCCCAAGGCTAGTGAAGGACCAATAGCTTCTCAGAGCTAA  1000
      |||||||||||| ||||||||||||||||||||||||||||||||||| |
seq2  TTGCTCACAGTCTCAAGGCTAGTGAAGGACCAATAGCTTCTCAGAGCT-A  998

seq1  GCCATTTGGTGCAGAGGCCAGTACTCAGAAGCTATGCTGTCTTCTGGAGC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTTGGTGCAGAGGCCAGTACTCAGAAGCTATGCTGTCTTCTGGAGC  1048

seq1  CAGGGTA-TGTTCGTCGCATGTTGGATGAAGTGGGCCATA-TATC-ACTC  1097
      ||||||| | ||||||||||||| |||| |||||| |||| |||| ||||
seq2  CAGGGTATTTTTCGTCGCATGTT-GATG-AGTGGG-CATATTATCAACTC  1095

seq1  CCACTTTGCTTTGAGT  1113
      ||||||||||||||||
seq2  CCACTTTGCTTTGAGT  1111


seq1: chr3_120726619_120727160
seq2: B6Ng01-323O23.g_67_608 (reverse)

seq1  CCGAATCCACACAACACCCACCTCTCTCTTTCATTAGAAAACAGACACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAATCCACACAACACCCACCTCTCTCTTTCATTAGAAAACAGACACAC  50

seq1  ACACACATATAATAAAATAATAATAATGACAATGCATTTTCTGGAACAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATATAATAAAATAATAATAATGACAATGCATTTTCTGGAACAAT  100

seq1  GGAATGAAGAGCGGTACCTTACTCAGAAGCCAGCATTCGAACCCTAAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGAAGAGCGGTACCTTACTCAGAAGCCAGCATTCGAACCCTAAGAA  150

seq1  ACCTTCTCTGGGATCAAACTCAGGACTGGCCTAAAGTCACTCTATTGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCTCTGGGATCAAACTCAGGACTGGCCTAAAGTCACTCTATTGACA  200

seq1  AAACCTTGCTGCCAGAGGGCAACTTCAAGTCACTTTCCTTAGGAGTCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTTGCTGCCAGAGGGCAACTTCAAGTCACTTTCCTTAGGAGTCATC  250

seq1  ACCTTGTGTTGGAGATGGACTCTCTCACTGGGAGGAGAGCCTGGCCAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGTGTTGGAGATGGACTCTCTCACTGGGAGGAGAGCCTGGCCAGCA  300

seq1  ACTCCCAGGATCCTCTTGTCTTTACTTCCCCAGTTCTATCACTTCAAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCAGGATCCTCTTGTCTTTACTTCCCCAGTTCTATCACTTCAAGCA  350

seq1  CCTTGCCACACCCAGCTTTCCAATGCAGGCTCTGGGGCTCAAATTCAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCCACACCCAGCTTTCCAATGCAGGCTCTGGGGCTCAAATTCAAAT  400

seq1  CCTCCAGTGTGTATGACAAGCACTGTACCAACAGAGCCATCCCCTGAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAGTGTGTATGACAAGCACTGTACCAACAGAGCCATCCCCTGAGCC  450

seq1  CGCTGATGTATGTTTCAAAGCCTGTCCCCCGCCACCACCACCCCCCATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGATGTATGTTTCAAAGCCTGTCCCCCGCCACCACCACCCCCCATTC  500

seq1  AGATGCTGAATCGGGAGCCAAGTTGACAAGACACTGGAATTC  542
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTGAATCGGGAGCCAAGTTGACAAGACACTGGAATTC  542


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