BAC Information

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BAC

Clone NameB6Ng01-324B17
Chromosome3 (Build37)
Map Location 119,543,867 - 119,545,043
singlet/doubletsinglet
Overlap genenone
Upstream geneDpyd, LOC100043275, LOC100043278, Ptbp2
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324B17.bB6Ng01-324B17.g
ACCGA112509GA112510
length1,2261,173
definitionB6Ng01-324B17.b B6Ng01-324B17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaacagtgaactttgggatatcactcgctgtttatttgagctcat
ttgttttccttgctttgtttctgttctttgtatgctttagttttaatttt
ggtagatgaggcatgcttagaaattcacccacttcttgatttttattttg
agtttaggtttccagggcatgctctgatctcttttcttgattttcttttg
tgtctcttgcaaaatctcccttttcatttctaattttattaagttgaatc
ttctgttagttttagttaattggactgtcaattttatttattattttcag
aaatcttctaatatgattgattctttgtgttcttcttgtttccacctgat
taatttctaccatgatcggtttttctttcttttcattaacttattttaga
tttggctcttcattgtttgtctaaaaccttcaggtacatcagttatttac
ttgatatttctctgatttttaaaaaaatattattaactaaatttattctt
agacaatttctcacacagacatatgtacggaccaccttcacccctcaccg
tcctattcctcctgtttgttctggttagagtttgttttacaaattatctt
actacgtatgattgactggcctagaaattgctaggtagaccaggctggcc
atgaacacacagagatctacctctcgctgcctccacactctgactttttt
tttaatgcatgcatctataactaaaattcactcttaataccaccttcata
gtatcccacaggttcttgtatgtcacttttttaatttgacttcaagaaat
tttagtttccttcctggtttctttgctggttcatttatcactatgaaatg
tgatgttcattctctataaatttgtctattttttaaatagtttttttttc
tctcggttggtttctagtttttatttcttttaggaaataactgagtgact
gactggaaaggttgagtgaaggattttgaaaatgactgttaaacactttg
ctctgtcatcctctctagatattccagcttgaagtccatttctcagatat
tactgtgactatacctgtcctcttcttagtctcttttcattctttcacag
tagactatggttagaatgccagaaaaacacatagatgattttccatttct
aactttgtctactagctgggtcaattcggtttccaaacttgttccatttt
agagagtaatttgtgaaaagaggcgt

gaattcaggaatgctacatgagaagggatgccacagagatccctagaaaa
gctgcattaaggctcttcatatctgtagtcgctgtgaaggacacaaaaca
cagcctgcagcttggaaatttgtaatgcttatatgtcacatcttgaacct
attttgtgcattgattgttttcttctttgcttgctggtttgaaagatgct
atgaaaacagcaaggcaaagactggctggtccatatttcagagatttcta
gtaataagaagcttgccaggatgttgtagaaaactgccaggccatgggtg
caacagtttccccatagaggttattaaggtgaaacaaaggattcaggcac
acaagggaagcttccacatagagcttccccctctccgggaatatgatatg
taggcatctagatctagaaccctcatctaaaagcaatggtaagtcttttc
acctcaaggaacccaggttagaaactccctcatacacgcccttaatgttt
tttccatggtgactctaaaactcatcaagttgacaatcatgtcaaagcac
aaatgcttcatttttgtcacattgaggggaccagtagaaagtgactcctg
tttgtaggcaggttctcgtctgttgtccctgcaagaagagagtgcacaga
tagttaaggaaaaacaagggtagctttgattttgttgggagggcaaaggt
ccttgcacccacaaatcactagggaaaccagaaatgttaatcacacagca
cagggttctctcttcaaaggcgaaaatatctgttttccattcagaatcct
ggaagcagatattaatgatccagtgatacttgctctctgtagagtcagac
ctcacccaatcccgagaatattcactctaaaccctccctctctagattgt
tacatgtagctttgattctcacttaatagaactgtttcttaggggagatc
tcacaagtaatttctagcccaaaaggacctctatgctgtctatctgacga
gaccacacaaatccatccctaggttccttatgctaatacttgcagcctat
ctctagaaccagcctctgtaagaaatgacaatattacttttgaagttagt
tagttgtaatatgccctaccttgtgcaccaggtacacagcaactttttcc
ctaatggagcgggattaaatatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_119543867_119545043
seq2: B6Ng01-324B17.g_68_1240

seq1  GAATTCAGGAATGCTACATGAGAAGGGATGCCACAGAGATCCCTAGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAATGCTACATGAGAAGGGATGCCACAGAGATCCCTAGAAAA  50

seq1  GCTGCATTAAGGCTCTTCATATCTGTAGTCGCTGTGAAGGACACAAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCATTAAGGCTCTTCATATCTGTAGTCGCTGTGAAGGACACAAAACA  100

seq1  CAGCCTGCAGCTTGGAAATTTGTAATGCTTATATGTCACATCTTGAACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGCAGCTTGGAAATTTGTAATGCTTATATGTCACATCTTGAACCT  150

seq1  ATTTTGTGCATTGATTGTTTTCTTCTTTGCTTGCTGGTTTGAAAGATGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTGCATTGATTGTTTTCTTCTTTGCTTGCTGGTTTGAAAGATGCT  200

seq1  ATGAAAACAGCAAGGCAAAGACTGGCTGGTCCATATTTCAGAGATTTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAACAGCAAGGCAAAGACTGGCTGGTCCATATTTCAGAGATTTCTA  250

seq1  GTAATAAGAAGCTTGCCAGGATGTTGTAGAAAACTGCCAGGCCATGGGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAAGAAGCTTGCCAGGATGTTGTAGAAAACTGCCAGGCCATGGGTG  300

seq1  CAACAGTTTCCCCATAGAGGTTATTAAGGTGAAACAAAGGATTCAGGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGTTTCCCCATAGAGGTTATTAAGGTGAAACAAAGGATTCAGGCAC  350

seq1  ACAAGGGAAGCTTCCACATAGAGCTTCCCCCTCTCCGGGAATATGATATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGGAAGCTTCCACATAGAGCTTCCCCCTCTCCGGGAATATGATATG  400

seq1  TAGGCATCTAGATCTAGAACCCTCATCTAAAAGCAATGGTAAGTCTTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCATCTAGATCTAGAACCCTCATCTAAAAGCAATGGTAAGTCTTTTC  450

seq1  ACCTCAAGGAACCCAGGTTAGAAACTCCCTCATACACGCCCTTAATGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAAGGAACCCAGGTTAGAAACTCCCTCATACACGCCCTTAATGTTT  500

seq1  TTTCCATGGTGACTCTAAAACTCATCAAGTTGACAATCATGTCAAAGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATGGTGACTCTAAAACTCATCAAGTTGACAATCATGTCAAAGCAC  550

seq1  AAATGCTTCATTTTTGTCACATTGAGGGGACCAGTAGAAAGTGACTCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTTCATTTTTGTCACATTGAGGGGACCAGTAGAAAGTGACTCCTG  600

seq1  TTTGTAGGCAGGTTCTCGTCTGTTGTCCCTGCAAGAAGAGAGTGCACAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAGGCAGGTTCTCGTCTGTTGTCCCTGCAAGAAGAGAGTGCACAGA  650

seq1  TAGTTAAGGAAAAACAAGGGTAGCTTTGATTTTGTTGGGAGGGCAAAGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAAGGAAAAACAAGGGTAGCTTTGATTTTGTTGGGAGGGCAAAGGT  700

seq1  CCTTGCACCCACAAATCACTAGGGAAACCAGAAATGTTAATCACACAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCACCCACAAATCACTAGGGAAACCAGAAATGTTAATCACACAGCA  750

seq1  CAGGGTTCTCTCTTCAAAGGCGAAAATATCTGTTTTCCATTCAGAATCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTCTCTCTTCAAAGGCGAAAATATCTGTTTTCCATTCAGAATCCT  800

seq1  GGAAGCAGATATTAATGATCCAGTGATACTTGCTCTCTGTAGAGTCAGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCAGATATTAATGATCCAGTGATACTTGCTCTCTGTAGAGTCAGAC  850

seq1  CTCACCCAAATCCCGAGAATATTCACTCTAAACCCTCCCTCTCTAGATTG  900
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCC-AATCCCGAGAATATTCACTCTAAACCCTCCCTCTCTAGATTG  899

seq1  TTACATGTAGCTTTGATTCTCACTTAATAGAACTGTTTCTTAGGGGAGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGTAGCTTTGATTCTCACTTAATAGAACTGTTTCTTAGGGGAGAT  949

seq1  CTCACAAGTAATTTCTAGCCC-AAAGGACCTCTATGCTGTCTATCTGACG  999
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTCACAAGTAATTTCTAGCCCAAAAGGACCTCTATGCTGTCTATCTGACG  999

seq1  AAGACCACACCAAATCCATCCCTAGG-TCCTTATGCTAATACTTGCAGCC  1048
       |||||||| |||||||||||||||| |||||||||||||||||||||||
seq2  -AGACCACA-CAAATCCATCCCTAGGTTCCTTATGCTAATACTTGCAGCC  1047

seq1  TATCTCTAGAACCCAGCTTCTTGGAAGAAATGAC-ATA-TAC-TTTGAGT  1095
      ||||||||||| ||||| || || |||||||||| ||| ||| |||||  
seq2  TATCTCTAGAA-CCAGCCTC-TGTAAGAAATGACAATATTACTTTTGAAG  1095

seq1  TTAGTTTTAG-TGTAATTATG-CCTA-CTTGTGCACCAGGTACACCAGGA  1142
      ||||  |||| ||||| |||| |||| ||||||||||||||||| ||| |
seq2  TTAG--TTAGTTGTAA-TATGCCCTACCTTGTGCACCAGGTACA-CAGCA  1141

seq1  AACTTTTTTCCCTAATTGTACTGTGTTTAAATATG  1177
      |   ||||||||||| || |  | | |||||||||
seq2  A--CTTTTTCCCTAA-TGGAGCGGGATTAAATATG  1173


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