BAC Information

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BAC

Clone NameB6Ng01-324G09
Chromosome3 (Build37)
Map Location 119,547,868 - 119,549,037
singlet/doubletsinglet
Overlap genenone
Upstream geneDpyd, LOC100043275, LOC100043278, Ptbp2
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324G09.bB6Ng01-324G09.g
ACCGA112723GA112724
length1,2131,154
definitionB6Ng01-324G09.b B6Ng01-324G09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctcccatcacataataatcaaaccaccaaatgcacaaaacaaat
aaagaatattaaaagcagtgaggggaaaaggtcaagtaacatataaaggc
agacctattagaattacaccacacttctcaccagacactatgaaagccag
aagattctggacagatgtcatacaaactctaacacaaacaccagctcagg
ctactatacccagcaaaactcccaactaccatagatggagaaaccaaggt
attccatgacaaaaaccaaatttacataatatctttccaggaatccagcc
cttcaaaggataataaagggaatatagggataataaagggataataaagg
gaaaactccaacacaacacaacacaacacaactatgccctaggaaaaaca
agaaagtaatctttcaacaaacttaaaagaagatagcaacatgaacagaa
tcccaactctaacaacaaaaataacaggaagcaaaagttacttttcctta
atatctcttaatatcaatggactcaattcaccaataaaaagacatagact
aacaaactagctaagtaaacaggacccaacattttgcagcatacagaaag
ccacctcagtgacaaagacagacactacttcagaataaatggctggaaaa
caattttccaagcaaatactcgcaagaaacaacatggagttgccattctg
atatcgaataaaatcaactttcaacctaaagttatcaaaaaagataagga
gggacactttatactcatcaaaggcaaaatctatcaagatgaattctcaa
ttctgaacatctatgctccaaatgcaagggaatccacattcattaaagaa
actttactaaagctcaaagcacacattatactgcacataataatagtggg
agattacaacaccccactctcatcattggacagatcttgaaaacagaaac
tgaactgagacacagtgaaactaacagaagttatgaaacaatggatttaa
gtatctacagaacattttatcctaaacaaagatatacccttcttctcagc
acctcatagtacttctcaaaatgaccataataattgttccacaaaacagc
ctcaacagaatacaaaaattattgaaatatccatgccttctatccgatca
ccacgaactaaggctgaatcttcattaccaactgagataatgagaggctc
tacattataccct
gaattcagctctactggccacactccagtgcagagggctggagggcattt
aacacactgagaaaggtcagagtcagactgtatcggtttctgaacctaag
aaattccaaactcctcgctacccattaaaatgaatgaagaaaagctgtgt
tgtgatgtgtggcgtcccaaagacttgcttgaggcaagggaaagaagcta
tgatgcttagcctgtgagactcacagcgttcgcgatcggtgccttccaga
gcatataaagaaagcgtggtgctgtgtgcgctctcatccctgagacgtta
taatctcacgagtcatgtgccgcttaaataatggagattccaacatggaa
aatacattactgcagttggccctgcgttcttggcagatattccaaaaaca
aaatagcaaaaatgagtttgtgatttgaattgattgcaaaatggattttt
tcatgcaaaagactggaaccagacttcagttaggggagagtccacagtaa
ttttgcaggatactagcttctgagaaaacatttccactatgatcaaaggt
agcaaactctgaagttgggcttttgtgttgggggcaaaacagatctaaat
tgtacgttgtagttttagatgtaaggtatgccctccactaaagctaaacc
taacttgctccagctgaagtgctatggatttggtaggaaagagatgcctt
tgcccttccctggtggtttgctttgcattagaagatctgattggtcagga
ttacagatggaccaggtcctttttcacaagatttcccttctttagtcttc
cctaatcatgaaagattctacagaactcaacagtttttaataattttgct
tcttctggggaaaggaagtgtggtaaggcaaacacatatgcacactcgtg
cacacacacacatgtatacacagtcgcatgcactcacacacacatgcatc
acagcatataaccttactgtttcttccttgcagttgacatccaaaattat
tttagtatcctcatccatattaattaaaagctgaaaataaatcttcaatt
gagaaccacaatgattgcaggctcttggagagagagtatattttattagt
agtattggaataccaagatgttaaaaggggagtggtagccacgaagttca
ctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_119547868_119549037
seq2: B6Ng01-324G09.g_68_1221 (reverse)

seq1  GCAGTGAAACTTCCTTGGCTACCACTCCCCCTTTTTAAACTATCTTGGGT  50
      |||||| ||||| | |||||||||||||||  ||||||   ||||| |||
seq2  GCAGTG-AACTT-CGTGGCTACCACTCCCC--TTTTAA--CATCTT-GGT  43

seq1  ATTCCAAATTACTACTAATAAATATTTCTCTTTCTTTCTCCAGGAGCTTG  100
      |||||||  |||||||||||||   | |    ||| |||||| |||| ||
seq2  ATTCCAA--TACTACTAATAAAATATAC----TCTCTCTCCAAGAGCCTG  87

seq1  CCAATCATGGTG--TCTCAATGGAAGATTTTATTTTCAGCCTTTTAATTA  148
       ||||||| |||  ||||||| ||||| ||||||||||| ||||||||||
seq2  -CAATCATTGTGGTTCTCAATTGAAGA-TTTATTTTCAG-CTTTTAATTA  134

seq1  ATATGGATGAGGATACTAAAAATAATTTTGGATGTCAACTGCAAGGGAAG  198
      ||||||||||||||||| |||||||||||||||||||||||||| |||||
seq2  ATATGGATGAGGATACT-AAAATAATTTTGGATGTCAACTGCAA-GGAAG  182

seq1  AAACAGTAAGGTTATATGCTGTGATGCATGTGTGTGTGAGTGCATGCGAC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTAAGGTTATATGCTGTGATGCATGTGTGTGTGAGTGCATGCGAC  232

seq1  TGTGTATACATGTGTGTGTGTGCACGAGTGTGCATATGTGTTTGCCTTAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATACATGTGTGTGTGTGCACGAGTGTGCATATGTGTTTGCCTTAC  282

seq1  CACACTTCCTTTCCCCAGAAGAAGCAAAATTATTAAAAACTGTTGAGTTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTCCTTTCCCCAGAAGAAGCAAAATTATTAAAAACTGTTGAGTTC  332

seq1  TGTAGAATCTTTCATGATTAGGGAAGACTAAAGAAGGGAAATCTTGTGAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAATCTTTCATGATTAGGGAAGACTAAAGAAGGGAAATCTTGTGAA  382

seq1  AAAGGACCTGGTCCATCTGTAATCCTGACCAATCAGATCTTCTAATGCAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGACCTGGTCCATCTGTAATCCTGACCAATCAGATCTTCTAATGCAA  432

seq1  AGCAAACCACCAGGGAAGGGCAAAGGCATCTCTTTCCTACCAAATCCATA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAACCACCAGGGAAGGGCAAAGGCATCTCTTTCCTACCAAATCCATA  482

seq1  GCACTTCAGCTGGAGCAAGTTAGGTTTAGCTTTAGTGGAGGGCATACCTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTCAGCTGGAGCAAGTTAGGTTTAGCTTTAGTGGAGGGCATACCTT  532

seq1  ACATCTAAAACTACAACGTACAATTTAGATCTGTTTTGCCCCCAACACAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTAAAACTACAACGTACAATTTAGATCTGTTTTGCCCCCAACACAA  582

seq1  AAGCCCAACTTCAGAGTTTGCTACCTTTGATCATAGTGGAAATGTTTTCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCAACTTCAGAGTTTGCTACCTTTGATCATAGTGGAAATGTTTTCT  632

seq1  CAGAAGCTAGTATCCTGCAAAATTACTGTGGACTCTCCCCTAACTGAAGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCTAGTATCCTGCAAAATTACTGTGGACTCTCCCCTAACTGAAGT  682

seq1  CTGGTTCCAGTCTTTTGCATGAAAAAATCCATTTTGCAATCAATTCAAAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTCCAGTCTTTTGCATGAAAAAATCCATTTTGCAATCAATTCAAAT  732

seq1  CACAAACTCATTTTTGCTATTTTGTTTTTGGAATATCTGCCAAGAACGCA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAACTCATTTTTGCTATTTTGTTTTTGGAATATCTGCCAAGAACGCA  782

seq1  GGGCCAACTGCAGTAATGTATTTTCCATGTTGGAATCTCCATTATTTAAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAACTGCAGTAATGTATTTTCCATGTTGGAATCTCCATTATTTAAG  832

seq1  CGGCACATGACTCGTGAGATTATAACGTCTCAGGGATGAGAGCGCACACA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCACATGACTCGTGAGATTATAACGTCTCAGGGATGAGAGCGCACACA  882

seq1  GCACCACGCTTTCTTTATATGCTCTGGAAGGCACCGATCGCGAACGCTGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCACGCTTTCTTTATATGCTCTGGAAGGCACCGATCGCGAACGCTGT  932

seq1  GAGTCTCACAGGCTAAGCATCATAGCTTCTTTCCCTTGCCTCAAGCAAGT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTCACAGGCTAAGCATCATAGCTTCTTTCCCTTGCCTCAAGCAAGT  982

seq1  CTTTGGGACGCCACACATCACAACACAGCTTTTCTTCATTCATTTTAATG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGGACGCCACACATCACAACACAGCTTTTCTTCATTCATTTTAATG  1032

seq1  GGTAGCGAGGAGTTTGGAATTTCTTAGGTTCAGAAACCGATACAGTCTGA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCGAGGAGTTTGGAATTTCTTAGGTTCAGAAACCGATACAGTCTGA  1082

seq1  CTCTGACCTTTCTCAGTGTGTTAAATGCCCTCCAGCCCTCTGCACTGGAG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGACCTTTCTCAGTGTGTTAAATGCCCTCCAGCCCTCTGCACTGGAG  1132

seq1  TGTGGCCAGTAGAGCTGAATTC  1170
      ||||||||||||||||||||||
seq2  TGTGGCCAGTAGAGCTGAATTC  1154