BAC Information

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BAC

Clone NameB6Ng01-325H08
Chromosome3 (Build37)
Map Location 16,117,849 - 16,119,028
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039985, LOC751864, Sirpb1, LOC668101, LOC100038947, LOC622425, LOC664795, LOC381484, Ythdf3
Downstream geneLOC100040034, LOC100040059
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325H08.bB6Ng01-325H08.g
ACCGA113511GA113512
length1,1601,178
definitionB6Ng01-325H08.b B6Ng01-325H08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaccctaggaataccgaaaggctgagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaaaatcaaaaattcaggtgacagc
agatgctggtgagaatgtggagaaagaggaacactcctccattgtttgtg
ggattgcaagcttgtacaaccactctggaaatcagtctgacggttcctca
gaaaattggacatagtactaccagaggatcccgcaatacctctcctggtc
atatatccagaagatgtcccaactggtaagaaggacacatgctccactat
gttcatagcagccttacttataatagccagaacctggaaagaacccagat
gcccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatg
gagtactactcagctattaaacacaatgaatttatgaaattcctaggcaa
atggttggacctggagggcatcatcctcagtgaggtaacccaatcacaaa
agaactcaaatgaaatgtactcactgataagtggatattagcccagaatc
ttagtatagcgagatataaggtacaatatgcaaaacacatgaaactgaag
aagaatgaagaccaaagtgtggacactttgctccttcttagaattggaat
acatcacccatggaaggagttacagagacaaagtttggagctgagacaaa
aggatggaccatctagagactgccatatccagggatccatcccataatta
gcctccaaacgatgacacaattgcatacactagcaagcctttgttgcaag
aacggtgatatagctgtcccttgtgagactaggccggggcctagcaaaca
cagaaatggatgctcacagtcgactattggatggatcacaggacccccaa
tggaggagctagagaaagtatccaggaactaaagagatctgcaaccctgt
agtcacacattatgactaccagtgccctgtagctctgactctagctgcat
atgtatcaaaagatgctagtcgcatcactgtaagagagcccatgacatgc
aaactttatatgccagtacaggcacgccagtcaaagtgaatggttggtta
ggaagtgggg

gaattcttgtgtacctatttatagtggttgtaggttaagtacagcttatt
cattagtgtaccaaaaccagaatacatttcattttggttatctatgtaat
attagagctaaatgtgagtgaacaactattttcatgaaaacttcttactg
ccatcttacttggtcctccaatgaacatacatttgaagattccatatatt
aaactttgatttttaacatactgtacatttttgagacatggaatagaatt
gcatctaggggcatagaaataaagatatttgaaatacatccaactaatgg
ggtggaactgagccagtctctttagtgttagccaacaaatagaacatagc
taagatagtgcacttctgagattttgtaacatggttaatttagatactta
gtgctgtagcctattgtgagtctgtcaaatgtttcccctttgaaagtagt
atggccacccatatgatttttggttttttttgtattcaaagtattaaaca
tgtgtcccaaagacatccatttttttttttcattctgccatttcacaata
tctttttattcttcataagtcagattaggactgtttacagaaaatctgga
aagacaatagccaaagttcttaactaatttttatccatctcagttcttaa
taacttagaaattagttttatagaaaatctagaaagacagaagccagtgt
tctattttgtacccatctcccaccgttcctcctaacctagaaattaatgt
gtatggattcattagtaaactgtacatattagttttttagtttttatcta
ctgccccttttgttgggatctcatcaagaataccatggcacatgtagctt
tcatgtctccttggttgagatcatttcgtgggattctgtttgatgataat
gatagtgtgtagaatgttcctcttttggaatctggctgataattttcatt
atttgggttataagctttagggaggaggactacacacatagtcctctttt
tttcctgtcacatacaagatgcatacagtaacttgttgtgatgataccac
ttagcaccttgtctgaggtgtatttgtagaatataaggtacttttgtgta
cctgccttaactgagaaataatgtacagtctgtatagtctatcagatacc
tctcactgctgacctactaagccttcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_16117849_16119028
seq2: B6Ng01-325H08.g_68_1245

seq1  GAATTCTTGTGTACCTATTTATAGTGGTTGTAGGTTAAGTACAGCTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTGTACCTATTTATAGTGGTTGTAGGTTAAGTACAGCTTATT  50

seq1  CATTAGTGTACCAAAACCAGAATACATTTCATTTTGGTTATCTATGTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGTGTACCAAAACCAGAATACATTTCATTTTGGTTATCTATGTAAT  100

seq1  ATTAGAGCTAAATGTGAGTGAACAACTATTTTCATGAAAACTTCTTACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAGCTAAATGTGAGTGAACAACTATTTTCATGAAAACTTCTTACTG  150

seq1  CCATCTTACTTGGTCCTCCAATGAACATACATTTGAAGATTCCATATATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTTACTTGGTCCTCCAATGAACATACATTTGAAGATTCCATATATT  200

seq1  AAACTTTGATTTTTAACATACTGTACATTTTTGAGACATGGAATAGAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTGATTTTTAACATACTGTACATTTTTGAGACATGGAATAGAATT  250

seq1  GCATCTAGGGGCATAGAAATAAAGATATTTGAAATACATCCAACTAATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTAGGGGCATAGAAATAAAGATATTTGAAATACATCCAACTAATGG  300

seq1  GGTGGAACTGAGCCAGTCTCTTTAGTGTTAGCCAACAAATAGAACATAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAACTGAGCCAGTCTCTTTAGTGTTAGCCAACAAATAGAACATAGC  350

seq1  TAAGATAGTGCACTTCTGAGATTTTGTAACATGGTTAATTTAGATACTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATAGTGCACTTCTGAGATTTTGTAACATGGTTAATTTAGATACTTA  400

seq1  GTGCTGTAGCCTATTGTGAGTCTGTCAAATGTTTCCCCTTTGAAAGTAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGTAGCCTATTGTGAGTCTGTCAAATGTTTCCCCTTTGAAAGTAGT  450

seq1  ATGGCCACCCATATGATTTTTGGTTTTTTTTGTATTCAAAGTATTAAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCACCCATATGATTTTTGGTTTTTTTTGTATTCAAAGTATTAAACA  500

seq1  TGTGTCCCAAAGACATCCATTTTTTTTTTTCATTCTGCCATTTCACAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCCCAAAGACATCCATTTTTTTTTTTCATTCTGCCATTTCACAATA  550

seq1  TCTTTTTATTCTTCATAAGTCAGATTAGGACTGTTTACAGAAAATCTGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTATTCTTCATAAGTCAGATTAGGACTGTTTACAGAAAATCTGGA  600

seq1  AAGACAATAGCCAAAGTTCTTAACTAATTTTTATCCATCTCAGTTCTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAATAGCCAAAGTTCTTAACTAATTTTTATCCATCTCAGTTCTTAA  650

seq1  TAACTTAGAAATTAGTTTTATAGAAAATCTAGAAAGACAGAAGCCAGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTAGAAATTAGTTTTATAGAAAATCTAGAAAGACAGAAGCCAGTGT  700

seq1  TCTATTTTGTACCCATCTCCCACCGTTCCTCCTAACCTAGAAATTAATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTTGTACCCATCTCCCACCGTTCCTCCTAACCTAGAAATTAATGT  750

seq1  GTATGGATTCATTAGTAAACTGTACATATTAGTTTTTTAGTTTTTATCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGATTCATTAGTAAACTGTACATATTAGTTTTTTAGTTTTTATCTA  800

seq1  CTGCCCCTTTTGTTGGGATCTCATCAAGAATACCATGGCACATGTAGCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCCTTTTGTTGGGATCTCATCAAGAATACCATGGCACATGTAGCTT  850

seq1  TCATGTCTCCTTGGTTGAGATCATTTCGTGGGATTCTGTTTGATGATAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCTCCTTGGTTGAGATCATTTCGTGGGATTCTGTTTGATGATAAT  900

seq1  GATAGTGTGTAGAATGTTCCTCTTTTGGAATCTGGCTGATAATTTTCATT  950
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GATAGTGTGTAGAATGTTCCTCTTTTGGAATCTGGCTGATAATTTTCA-T  949

seq1  TATTTGGGTTATAAGCTTTAGGGAGGAGGACTACACACATAGTCCTC-TT  999
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TATTTGGGTTATAAGCTTTAGGGAGGAGGACTACACACATAGTCCTCTTT  999

seq1  TTTTCCTGTCACATACCAAGGATGCATACAGTAACTTGTGTTGATGATA-  1048
      ||||||||||||||||  | |||||||||||||||||||  |||||||| 
seq2  TTTTCCTGTCACATAC--AAGATGCATACAGTAACTTGTTGTGATGATAC  1047

seq1  CACTTAGCACC-TGTCTGAGGTGTAATTTGTTAGATATAAAGTTACTTTT  1097
      ||||||||||| |||||||||||| ||||||   |||| ||| |||||||
seq2  CACTTAGCACCTTGTCTGAGGTGT-ATTTGTAGAATAT-AAGGTACTTTT  1095

seq1  GTGTA-CTGCCTTACCTGAGATTAAATGTACAGTCTGGTATAGTCTATTC  1146
      ||||| |||||||| ||||||   |||||||||||| |||||||||| ||
seq2  GTGTACCTGCCTTAACTGAGAAATAATGTACAGTCT-GTATAGTCTA-TC  1143

seq1  AGGTA-CTCT-ACTGCTGACCTACTTAAGCTTTCCT  1180
      || || |||| ||||||||||||| ||||| |||||
seq2  AGATACCTCTCACTGCTGACCTAC-TAAGCCTTCCT  1178


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