BAC Information

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BAC

Clone NameB6Ng01-325K02
Chromosome3 (Build37)
Map Location 158,132,677 - 158,133,181
singlet/doubletsinglet
Overlap geneLrrc7
Upstream geneZranb2, Ptger3, LOC433686, LOC624684, Cth, Ankrd13c, Sfrs11, Lrrc40
Downstream geneLOC100041008, LOC668905
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325K02.bB6Ng01-325K02.g
ACCGA113641GA113642
length4991,126
definitionB6Ng01-325K02.b B6Ng01-325K02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatcagcatcttccatttgttaaaagccaacattttgaaaatgt
catttatatgaatgcctaaattctgctggggatttgaagtgatgcaggat
gatttgtcataccaaacaaggatgcaggatgactggttataacaaaacaa
gacttactataaagtacttctggtcaaagttgttgcattaagcaatagtt
aactgttcatgacacccatttaaaagaacaagtgttcttattttgtttga
gaaaccaaaataattgatgtctattaagtgttttactaagcaactacact
aacaagaaaagaagaactatgtagaaagaggaaccattgtaaaatgtatg
cctaagtaagtgtgttttgtgcaagattaggagactttttcaaacctttt
gggatatatatatatatatatatatatatatatatatatatatatatgta
tatatatagatatatgtatatatatatatatatatatatacacacatat
gaattctattgagtatttttgcatcgatattcataagggaaaatagtctg
aagttctctatctttgttgaatctttctgtggttttggtatcagagtaat
tgtggcttcatataatgagttgggtagagtaccttctacttctattttgt
ggaatagtttgtgcagaactggaattagatcttctttgaaggtcttatag
aactcggtactaaacccatctggtctgtggcttttttggttgggagacta
ttaatgactgcttctatttctttaggagatatgaaactgtttagattgtt
aacttgatcctgatttaactttggtacctggtatctgtctaaatgttttg
agttaggatctttttgcattttgtattttctttgattgttgtgcctatgt
tctctgtggaatcttctgcagctgagattctctcttccatgtcttgtatt
ctgttgctgatgtttgcatctatggttccagatttctttcctaggttttc
tatctccagtgttgcctcactttgggttttctttattgtgtctacttccc
tttttaggtcttggatggttttattcaattccatcacctgtttggtcgtg
ttttcctgcaattctttaagggatttttgtgctttctctttaaggtcttc
tacctgtttagcggtgttctcctgtatttctttaagtgggttattaaagt
ccttcttgatgtcctctaccatcatctgagctatgcttttaaatcaggga
ctatcttttccggtgtgttggggttcccacgactgggtggagtgtgagtg
ctgcattctgatgatggtgagtggtcttgatttctgttagtaagattctt
acacttttctttttccatctggtaacctctggagttagttgttgtagttg
tctctggttagagcttgttcctcaggtgatttatgttagtcttctatcag
cagacctggagactaagcttcttcactgagttttcagtgtttcagattac
tctcttgcaggcaagcttctcttcttgcagggaggttcacagatattctg
gtgttcgaatctggctcctgggcagagttggtgatccactatcaaaagtc
tttagatactccggtagaagggtctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_158132677_158133181
seq2: B6Ng01-325K02.b_48_546

seq1  GAATTCCATCAGCATCTTCCATTTGTTAAAAGCCAACATTTTGAAAATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCAGCATCTTCCATTTGTTAAAAGCCAACATTTTGAAAATGT  50

seq1  CATTTATATGAATGCCTAAATTCTGCTGGGGATTTGAAGTGATGCAGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATATGAATGCCTAAATTCTGCTGGGGATTTGAAGTGATGCAGGAT  100

seq1  GATTTGTCATACCAAACAAGGATGCAGGATGACTGGTTATAACAAAACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTCATACCAAACAAGGATGCAGGATGACTGGTTATAACAAAACAA  150

seq1  GACTTACTATAAAGTACTTCTGGTCAAAGTTGTTGCATTAAGCAATAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTACTATAAAGTACTTCTGGTCAAAGTTGTTGCATTAAGCAATAGTT  200

seq1  AACTGTTCATGACACCCATTTAAAAGAACAAGTGTTCTTATTTTGTTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTTCATGACACCCATTTAAAAGAACAAGTGTTCTTATTTTGTTTGA  250

seq1  GAAACCAAAATAATTGATGTCTATTAAGTGTTTTACTAAGCAACTACACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCAAAATAATTGATGTCTATTAAGTGTTTTACTAAGCAACTACACT  300

seq1  AACAAGAAAAGAAGAACTATGTAGAAAGAGGAACCATTGTAAAATGTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGAAAAGAAGAACTATGTAGAAAGAGGAACCATTGTAAAATGTATG  350

seq1  CCTAAGTAAGTGTGTTTTGTGCAAGATTAGGAGACTTTTTCAAACCTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGTAAGTGTGTTTTGTGCAAGATTAGGAGACTTTTTCAAACCTTTT  400

seq1  GGGATATATATATATATATATATATATATATATATATATATATATGTATA  450
      ||||||||||||||||||||||||||||||||||||||||      ||||
seq2  GGGATATATATATATATATATATATATATATATATATATA------TATA  444

seq1  TATGTGTGTGTATGTGTGTGTGTATATATACACACATATATATATACACA  500
      ||||| | | |||   | | |||||||||| | | |||||||||||||||
seq2  TATGTATATATATAGATATATGTATATATATATATATATATATATACACA  494

seq1  CATAT  505
      |||||
seq2  CATAT  499