BAC Information

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BAC

Clone NameB6Ng01-325L01
Chromosome3 (Build37)
Map Location 32,409,882 - 32,540,662
singlet/doubletdoublet
Overlap geneZfp639, Mfn1, Gnb4, LOC100040977
Upstream geneLOC625125, Kcnmb2, LOC665514, Zmat3, 4930429B21Rik, Pik3ca, Kcnmb3
Downstream geneActl6a, Mrpl47, Ndufb5, Usp13, Pex2, EG545512
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325L01.bB6Ng01-325L01.g
ACCGA113684GA113685
length1,027615
definitionB6Ng01-325L01.b B6Ng01-325L01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,539,641 - 32,540,662)(32,409,882 - 32,410,496)
sequence
gaattccactgaaatctctggctgctcccgctgactgcagaagacatgag
gcatggagtgttttctctttatgtgtttatcagaaagatattccatgagt
tgtcaatattatatgcagggcatgtatattataggcagtcagcatgcgtg
aagccctgggttcagcccccagcatatcataaatcggatgtggtagcaca
tgctgtactctcagcacttggaaggtgcggtgagaagctcaaggctatcc
ttagttatatagtgagtttgaggtcctgtgtgacaggaatctctgtgtcc
aagaaaatataaatataataaaaatatattataataaataaaaataaaag
ttatgttaaggttaatagtaacagctgggaattagaaaggctagatcaag
aaccctcaatgttataatcttaagatgaaaaatcaatttcacaatttctg
atgttcattgagggaaggagaaattgattccatgttcagagagagaagtg
gacacacagcttgatgcacgtgggggtcctaggttgctcacaggtttgcg
agatggattgtttaaaaaggggacatgtgtgtagcagatttttccctaat
taattgattagataataaagatgacaagaagtcaatcactgggcgaggag
gaagaaggccttctgggccggagagaggaagagggaacagagggaaagga
atgccccttctctgtacggaaaagcgggaggaaaacaggcaaaatgtatt
ggggctgttagatctgttggtagaatccaccagaacccaccatcgggaag
atttctaacatagaatagttaatgagattccatgcccagtggttgtatta
tctgttgattctaaactaagattgcctggtgtttttcattttgcattgac
acaactgagctctaggggaaaggtaccaccagtggagcttgggttggtga
accgctaaaaatttggggggtgctgagcgggtttggcacagctagccaca
gggaataagatgactggaaaatcagca
gaattcctgtaatctgtgacagggacttgtgtagcctaggctagccggaa
aggcgtgtgccaccacgccgggcttcaattagaacgggaaaattctcttt
ctgtttgaaaatgtacgtgcttattgcgtgtatgcatgcgcacgtgtgcc
atggcgcaagtgtagaggtcagaggacaactttccaagaggctgttcttc
ccaccttgcgggttccagggaagacacccaggtcgtctggcttagctgta
agcgccttctgagccctggaaatattttttgtttgtttgttttaatggag
gtgaaaaaataaagtgttataaacgtcttcaaaacgcaacgacccagtct
caaaaaattcggtgctgggtgctggagagaacacccagttggagtaggtt
catgattgcctccagatcagacaccatctcggactacacatgcgcgcgaa
aacagccttttaaaaatatgtcttggtgcggggcagtggtggcgcacacc
tttaaacccagcacttgggaggcagaggcagacggatttctgagttcaag
gccagcctgatctacagagtgagttccaggacagctgggctacacagaga
aactctgtctcgaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_32539641_32540662
seq2: B6Ng01-325L01.b_47_1073 (reverse)

seq1  TGCTGTTTTTCCAGTCATC-TATTCCCTGTGGCTAGCTGTTGCCAAA-CC  48
      ||||| ||||||||||||| ||||||||||||||||||| ||||||| ||
seq2  TGCTGATTTTCCAGTCATCTTATTCCCTGTGGCTAGCTG-TGCCAAACCC  49

seq1  GCTCAGCACCCCC--AAATTTTAGCGGTTCACCAACCC-AGCTCCACTGT  95
      |||||||||||||  || |||||||||||||||||||| |||||||||| 
seq2  GCTCAGCACCCCCCAAATTTTTAGCGGTTCACCAACCCAAGCTCCACTGG  99

seq1  GGTTACCTTTCCCCTAGAGCTCAGTTGTGTCAATGCAAAATGAAAAACAC  145
       | |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACCTTTCCCCTAGAGCTCAGTTGTGTCAATGCAAAATGAAAAACAC  149

seq1  CAGGCAATCTTAGTTTAGAATCAACAGATAATACAACCACTGGGCATGGA  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAATCTTAGTTTAGAATCAACAGATAATACAACCACTGGGCATGGA  199

seq1  ATCTCATTAACTATTCTATGTTAGAAATCTT-CCGATGGTGGGTTCTGGT  244
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATCTCATTAACTATTCTATGTTAGAAATCTTCCCGATGGTGGGTTCTGGT  249

seq1  GGATTCTACCAACAGATCTAACAGCCCCAATACATTTTGCCTGTTTTCCT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCTACCAACAGATCTAACAGCCCCAATACATTTTGCCTGTTTTCCT  299

seq1  CCCGCTTTTCCGTACAGAGAAGGGGCATTCCTTTCCCTCTGTTCCCTCTT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCTTTTCCGTACAGAGAAGGGGCATTCCTTTCCCTCTGTTCCCTCTT  349

seq1  CCTCTCTCCGGCCCAGAAGGCCTTCTTCCTCCTCGCCCAGTGATTGACTT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTCCGGCCCAGAAGGCCTTCTTCCTCCTCGCCCAGTGATTGACTT  399

seq1  CTTGTCATCTTTATTATCTAATCAATTAATTAGGGAAAAATCTGCTACAC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCATCTTTATTATCTAATCAATTAATTAGGGAAAAATCTGCTACAC  449

seq1  ACATGTCCCCTTTTTAAACAATCCATCTCGCAAACCTGTGAGCAACCTAG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTCCCCTTTTTAAACAATCCATCTCGCAAACCTGTGAGCAACCTAG  499

seq1  GACCCCCACGTGCATCAAGCTGTGTGTCCACTTCTCTCTCTGAACATGGA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCCCACGTGCATCAAGCTGTGTGTCCACTTCTCTCTCTGAACATGGA  549

seq1  ATCAATTTCTCCTTCCCTCAATGAACATCAGAAATTGTGAAATTGATTTT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATTTCTCCTTCCCTCAATGAACATCAGAAATTGTGAAATTGATTTT  599

seq1  TCATCTTAAGATTATAACATTGAGGGTTCTTGATCTAGCCTTTCTAATTC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTAAGATTATAACATTGAGGGTTCTTGATCTAGCCTTTCTAATTC  649

seq1  CCAGCTGTTACTATTAACCTTAACATAACTTTTATTTTTATTTATTATAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGTTACTATTAACCTTAACATAACTTTTATTTTTATTTATTATAA  699

seq1  TATATTTTTATTATATTTATATTTTCTTGGACACAGAGATTCCTGTCACA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTTATTATATTTATATTTTCTTGGACACAGAGATTCCTGTCACA  749

seq1  CAGGACCTCAAACTCACTATATAACTAAGGATAGCCTTGAGCTTCTCACC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACCTCAAACTCACTATATAACTAAGGATAGCCTTGAGCTTCTCACC  799

seq1  GCACCTTCCAAGTGCTGAGAGTACAGCATGTGCTACCACATCCGATTTAT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTTCCAAGTGCTGAGAGTACAGCATGTGCTACCACATCCGATTTAT  849

seq1  GATATGCTGGGGGCTGAACCCAGGGCTTCACGCATGCTGACTGCCTATAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGCTGGGGGCTGAACCCAGGGCTTCACGCATGCTGACTGCCTATAA  899

seq1  TATACATGCCCTGCATATAATATTGACAACTCATGGAATATCTTTCTGAT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATGCCCTGCATATAATATTGACAACTCATGGAATATCTTTCTGAT  949

seq1  AAACACATAAAGAGAAAACACTCCATGCCTCATGTCTTCTGCAGTCAGCG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACATAAAGAGAAAACACTCCATGCCTCATGTCTTCTGCAGTCAGCG  999

seq1  GGAGCAGCCAGAGATTTCAGTGGAATTC  1022
      ||||||||||||||||||||||||||||
seq2  GGAGCAGCCAGAGATTTCAGTGGAATTC  1027

seq1: chr3_32409882_32410496
seq2: B6Ng01-325L01.g_69_683

seq1  GAATTCCTGTAATCTGTGACAGGGACTTGTGTAGCCTAGGCTAGCCGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTAATCTGTGACAGGGACTTGTGTAGCCTAGGCTAGCCGGAA  50

seq1  AGGCGTGTGCCACCACGCCGGGCTTCAATTAGAACGGGAAAATTCTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCGTGTGCCACCACGCCGGGCTTCAATTAGAACGGGAAAATTCTCTTT  100

seq1  CTGTTTGAAAATGTACGTGCTTATTGCGTGTATGCATGCGCACGTGTGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTGAAAATGTACGTGCTTATTGCGTGTATGCATGCGCACGTGTGCC  150

seq1  ATGGCGCAAGTGTAGAGGTCAGAGGACAACTTTCCAAGAGGCTGTTCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCGCAAGTGTAGAGGTCAGAGGACAACTTTCCAAGAGGCTGTTCTTC  200

seq1  CCACCTTGCGGGTTCCAGGGAAGACACCCAGGTCGTCTGGCTTAGCTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTTGCGGGTTCCAGGGAAGACACCCAGGTCGTCTGGCTTAGCTGTA  250

seq1  AGCGCCTTCTGAGCCCTGGAAATATTTTTTGTTTGTTTGTTTTAATGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCCTTCTGAGCCCTGGAAATATTTTTTGTTTGTTTGTTTTAATGGAG  300

seq1  GTGAAAAAATAAAGTGTTATAAACGTCTTCAAAACGCAACGACCCAGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAAAATAAAGTGTTATAAACGTCTTCAAAACGCAACGACCCAGTCT  350

seq1  CAAAAAATTCGGTGCTGGGTGCTGGAGAGAACACCCAGTTGGAGTAGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAATTCGGTGCTGGGTGCTGGAGAGAACACCCAGTTGGAGTAGGTT  400

seq1  CATGATTGCCTCCAGATCAGACACCATCTCGGACTACACATGCGCGCGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATTGCCTCCAGATCAGACACCATCTCGGACTACACATGCGCGCGAA  450

seq1  AACAGCCTTTTAAAAATATGTCTTGGTGCGGGGCAGTGGTGGCGCACACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCCTTTTAAAAATATGTCTTGGTGCGGGGCAGTGGTGGCGCACACC  500

seq1  TTTAAACCCAGCACTTGGGAGGCAGAGGCAGACGGATTTCTGAGTTCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACCCAGCACTTGGGAGGCAGAGGCAGACGGATTTCTGAGTTCAAG  550

seq1  GCCAGCCTGATCTACAGAGTGAGTTCCAGGACAGCTGGGCTACACAGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCCTGATCTACAGAGTGAGTTCCAGGACAGCTGGGCTACACAGAGA  600

seq1  AACTCTGTCTCGAAA  615
      |||||||||||||||
seq2  AACTCTGTCTCGAAA  615