BAC Information

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BAC

Clone NameB6Ng01-326A23
Chromosome3 (Build37)
Map Location 51,061,675 - 51,200,165
singlet/doubletdoublet
Overlap geneElf2, A630062H14, 4930583H14Rik
Upstream geneLOC639469, Slc7a11, EG621304, LOC100039667, Ccrn4l
Downstream geneLOC669130, Ndufc1, Narg1, Rab33b, Setd7, LOC100039684, Mgst2, Maml3, LOC433587, LOC100039788, LOC671890, Olfr1398-ps1, Foxo1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326A23.bB6Ng01-326A23.g
ACCGA113961GA113962
length1,150948
definitionB6Ng01-326A23.b B6Ng01-326A23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,061,675 - 51,062,824)(51,199,221 - 51,200,165)
sequence
gaattcccctttggtagtaatatctgcaagggaaaaatgactaaattaat
caaatgtactatcacatcttactcaataaaaccacacgtacatgtgacag
aaacatttacttattcctgtttatgagggctccttccacttggcctacac
ctaagattacagatttggtgacaatgaagttggtatgtcataccacagga
ccctgtgatggttaatattgactgttgatttgacaagatctagaagcacg
tagggctgactagattcagttgaagtgggaagaaccaagctatctgtgag
cagcactcttctcagaatctcagaccaaataaaaaggaagggcaagctaa
gtagcagcgttcaccgctgttgtcgggctgggaatgaggcgagtcctacc
atgtgcccttccctaggttgcctctgtcacatcagtaagaagtagctaat
atagctctgtgaccttgatgtgtccaaaacagttgtagcaccaacaagtg
aacctagactccctattagggcagtgctttatctccagcaccccacggcc
cttctcttacagaccaggccagcttccagctgtagactgaccctcctccc
tccacctcccaagtgatgagatcacagtacattccaccatggacaccttg
ttctctcccttaagaaaagcttaacatagacagaatactttattggtaat
agaagcaactctaatttgttacaaaaacaacctgactttatctggaacaa
cctgactttacctggaataatcatggaacatgtgaatactgactagtagc
tcatgcctgaaataccagcattgggaagctgggagaatagatgcaagctc
caagccagcctgggctacatagcaagaactgtctcaaataaataaacact
atcatgtgtacattggctattttttcattttcgagataaagtcatttaca
ccatttgcagggactaaaagtacattcactctggaaagtgtgttcttaca
gatctcatttgtagctcagctggcttcaaccttactctgtaaaaggagga
tgactttgaatcatcctcctaactttcaattttcaactgactacaagcac
ggcactataccagtctgggtttaactttttttacaaggcctacgaggtaa

gaattcctgatctccggcaagtaatgttccttcattttttttaagtgact
gtgggttatgatcagtagatatggagtgaaaagaaccacttcgaagaggg
tttggctttctcctagagttccacggttttctattcaatgaaccactagt
ttctccgaagaggtgaaggaacggataggtaggtggacgtggggtgttca
cgtgttcgcaggtgggccctagaagaagtgtcggttcactgatccctggc
ggtgataaacccccggcttcttgtggccctgatcatcccttcgaagtgag
gcctcggggtactcttctgatgttgctgacaagcttgcagctccgtcagc
ttcggattagggaatgcgtgaggaaatgcgctcttggaaattttctaaag
aagcagcatcctggactataagagcttacaggctttgggctggtttgcag
gtcctctcctagctgcccaccctctctgttcatcactcactggggcacag
atcttggacactagaaagttaattattctgtactttgccccactccttgg
ggcatcggaggcagcatccaaagcaaagatttgactgagaaagacagaaa
aacgcctgtggaaatccatgagccagagcgagctttgctttgctttgctt
tgctttaagcacttgttcaccctgctttgattaggcctgtgttggtggtg
gatggtctcaagaaagagatctagtcacctattcttttaaatgatgctta
aaagaagtcttcccacaagtactagaacgcctttcccctctgtatgtgta
tacctcataagagagcaacttgcagaagtgaggagacgccattttatttt
aaactgattataatggggactgttctggtgctcagataaagaaagagatg
agactgacctcatcctccacagaaaactcctcttctctctccctccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_51061675_51062824
seq2: B6Ng01-326A23.b_52_1201

seq1  GAATTCCCCTTTGGTAGTAATATCTGCAAGGGAAAAATGACTAAATTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCTTTGGTAGTAATATCTGCAAGGGAAAAATGACTAAATTAAT  50

seq1  CAAATGTACTATCACATCTTACTCAATAAAACCACACGTACATGTGACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTACTATCACATCTTACTCAATAAAACCACACGTACATGTGACAG  100

seq1  AAACATTTACTTATTCCTGTTTATGAGGGCTCCTTCCACTTGGCCTACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTTACTTATTCCTGTTTATGAGGGCTCCTTCCACTTGGCCTACAC  150

seq1  CTAAGATTACAGATTTGGTGACAATGAAGTTGGTATGTCATACCACAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGATTACAGATTTGGTGACAATGAAGTTGGTATGTCATACCACAGGA  200

seq1  CCCTGTGATGGTTAATATTGACTGTTGATTTGACAAGATCTAGAAGCACG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTGATGGTTAATATTGACTGTTGATTTGACAAGATCTAGAAGCACG  250

seq1  TAGGGCTGACTAGATTCAGTTGAAGTGGGAAGAACCAAGCTATCTGTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCTGACTAGATTCAGTTGAAGTGGGAAGAACCAAGCTATCTGTGAG  300

seq1  CAGCACTCTTCTCAGAATCTCAGACCAAATAAAAAGGAAGGGCAAGCTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACTCTTCTCAGAATCTCAGACCAAATAAAAAGGAAGGGCAAGCTAA  350

seq1  GTAGCAGCGTTCACCGCTGTTGTCGGGCTGGGAATGAGGCGAGTCCTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAGCGTTCACCGCTGTTGTCGGGCTGGGAATGAGGCGAGTCCTACC  400

seq1  ATGTGCCCTTCCCTAGGTTGCCTCTGTCACATCAGTAAGAAGTAGCTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCCCTTCCCTAGGTTGCCTCTGTCACATCAGTAAGAAGTAGCTAAT  450

seq1  ATAGCTCTGTGACCTTGATGTGTCCAAAACAGTTGTAGCACCAACAAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTCTGTGACCTTGATGTGTCCAAAACAGTTGTAGCACCAACAAGTG  500

seq1  AACCTAGACTCCCTATTAGGGCAGTGCTTTATCTCCAGCACCCCACGGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAGACTCCCTATTAGGGCAGTGCTTTATCTCCAGCACCCCACGGCC  550

seq1  CTTCTCTTACAGACCAGGCCAGCTTCCAGCTGTAGACTGACCCTCCTCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTTACAGACCAGGCCAGCTTCCAGCTGTAGACTGACCCTCCTCCC  600

seq1  TCCACCTCCCAAGTGATGAGATCACAGTACATTCCACCATGGACACCTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTCCCAAGTGATGAGATCACAGTACATTCCACCATGGACACCTTG  650

seq1  TTCTCTCCCTTAAGAAAAGCTTAACATAGACAGAATACTTTATTGGTAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCCCTTAAGAAAAGCTTAACATAGACAGAATACTTTATTGGTAAT  700

seq1  AGAAGCAACTCTAATTTGTTACAAAAACAACCTGACTTTATCTGGAACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCAACTCTAATTTGTTACAAAAACAACCTGACTTTATCTGGAACAA  750

seq1  CCTGACTTTACCTGGAATAATCATGGAACATGTGAATACTGACTAGTAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACTTTACCTGGAATAATCATGGAACATGTGAATACTGACTAGTAGC  800

seq1  TCATGCCTGAAATACCAGCATTGGGAAGCTGGGAGAATAGATGCAAGCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCCTGAAATACCAGCATTGGGAAGCTGGGAGAATAGATGCAAGCTC  850

seq1  CAAGCCAGCCTGGGCTACATAGCAAGAACTGTCTCAAATAAATAAACACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCAGCCTGGGCTACATAGCAAGAACTGTCTCAAATAAATAAACACT  900

seq1  ATCATGTGTACATTGGCTATTTTTTCATTTTCGAGATAAAGTCATTTACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGTGTACATTGGCTATTTTTTCATTTTCGAGATAAAGTCATTTACA  950

seq1  CCATTTGCAGGGACTAAAAGTACATTCACTCTGGAAAGTGTGTTCTTACA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTGCAGGGACTAAAAGTACATTCACTCTGGAAAGTGTGTTCTTACA  1000

seq1  GATCTCA-TTGTAGCTCAGGCTGGCTTCAACCTTACTCTGTAAAA-GAGG  1048
      ||||||| |||||||||| |||||||||||||||||||||||||| ||||
seq2  GATCTCATTTGTAGCTCA-GCTGGCTTCAACCTTACTCTGTAAAAGGAGG  1049

seq1  ATGACTTTGAAATCATCCTCCTAAC-TTCAATTTTCAACTGACTACAAGG  1097
      ||||||||| ||||||||||||||| |||||||||||||||||||||| |
seq2  ATGACTTTG-AATCATCCTCCTAACTTTCAATTTTCAACTGACTACAA-G  1097

seq1  CACGGGCACTATACCCAGTCTGGGTTTAAC--TTTTTACAAGGCCTACAA  1145
      ||| ||||||||| ||||||||||||||||  |||||||||||||||| |
seq2  CAC-GGCACTATA-CCAGTCTGGGTTTAACTTTTTTTACAAGGCCTACGA  1145

seq1  GGTAA  1150
      |||||
seq2  GGTAA  1150

seq1: chr3_51199221_51200165
seq2: B6Ng01-326A23.g_62_1009 (reverse)

seq1  AGGGAGGGAGAGAG-AGA-GAGTTTTCTGTGGAGGATGAGGTCAGTCTCA  48
      |||||||||||||| ||| |||||||||||||||||||||||||||||||
seq2  AGGGAGGGAGAGAGAAGAGGAGTTTTCTGTGGAGGATGAGGTCAGTCTCA  50

seq1  TCTCTTTCTTTATCTGAGCACCAGAACAGTCCCCATTATAATCAGTTTAA  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTCTTTATCTGAGCACCAGAACAGTCCCCATTATAATCAGTTTAA  100

seq1  AAT-AAATGGCGTCTCCTCACTTCTGCAAGTTGCTCTCTTATGAGGTATA  147
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATGGCGTCTCCTCACTTCTGCAAGTTGCTCTCTTATGAGGTATA  150

seq1  CACATACAGAGGGGAAAGGCGTTCTAGTACTTGTGGGAAGACTTCTTTTA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACAGAGGGGAAAGGCGTTCTAGTACTTGTGGGAAGACTTCTTTTA  200

seq1  AGCATCATTTAAAAGAATAGGTGACTAGATCTCTTTCTTGAGACCATCCA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCATTTAAAAGAATAGGTGACTAGATCTCTTTCTTGAGACCATCCA  250

seq1  CCACCAACACAGGCCTAATCAAAGCAGGGTGAACAAGTGCTTAAAGCAAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAACACAGGCCTAATCAAAGCAGGGTGAACAAGTGCTTAAAGCAAA  300

seq1  GCAAAGCAAAGCAAAGCTCGCTCTGGCTCATGGATTTCCACAGGCGTTTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGCAAAGCAAAGCTCGCTCTGGCTCATGGATTTCCACAGGCGTTTT  350

seq1  TCTGTCTTTCTCAGTCAAATCTTTGCTTTGGATGCTGCCTCCGATGCCCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTTTCTCAGTCAAATCTTTGCTTTGGATGCTGCCTCCGATGCCCC  400

seq1  AAGGAGTGGGGCAAAGTACAGAATAATTAACTTTCTAGTGTCCAAGATCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGTGGGGCAAAGTACAGAATAATTAACTTTCTAGTGTCCAAGATCT  450

seq1  GTGCCCCAGTGAGTGATGAACAGAGAGGGTGGGCAGCTAGGAGAGGACCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCCCAGTGAGTGATGAACAGAGAGGGTGGGCAGCTAGGAGAGGACCT  500

seq1  GCAAACCAGCCCAAAGCCTGTAAGCTCTTATAGTCCAGGATGCTGCTTCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACCAGCCCAAAGCCTGTAAGCTCTTATAGTCCAGGATGCTGCTTCT  550

seq1  TTAGAAAATTTCCAAGAGCGCATTTCCTCACGCATTCCCTAATCCGAAGC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAATTTCCAAGAGCGCATTTCCTCACGCATTCCCTAATCCGAAGC  600

seq1  TGACGGAGCTGCAAGCTTGTCAGCAACATCAGAAGAGTACCCCGAGGCCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGGAGCTGCAAGCTTGTCAGCAACATCAGAAGAGTACCCCGAGGCCT  650

seq1  CACTTCGAAGGGATGATCAGGGCCACAAGAAGCCGGGGGTTTATCACCGC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCGAAGGGATGATCAGGGCCACAAGAAGCCGGGGGTTTATCACCGC  700

seq1  CAGGGATCAGTGAACCGACACTTCTTCTAGGGCCCACCTGCGAACACGTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGATCAGTGAACCGACACTTCTTCTAGGGCCCACCTGCGAACACGTG  750

seq1  AACACCCCACGTCCACCTACCTATCCGTTCCTTCACCTCTTCGGAGAAAC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCCCACGTCCACCTACCTATCCGTTCCTTCACCTCTTCGGAGAAAC  800

seq1  TAGTGGTTCATTGAATAGAAAACCGTGGAACTCTAGGAGAAAGCCAAACC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGTTCATTGAATAGAAAACCGTGGAACTCTAGGAGAAAGCCAAACC  850

seq1  CTCTTCGAAGTGGTTCTTTTCACTCCATATCTACTGATCATAACCCACAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCGAAGTGGTTCTTTTCACTCCATATCTACTGATCATAACCCACAG  900

seq1  TCACTTAAAAAAAATGAAGGAACATTACTTGCCGGAGATCAGGAATTC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTAAAAAAAATGAAGGAACATTACTTGCCGGAGATCAGGAATTC  948