BAC Information

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BAC

Clone NameB6Ng01-327G20
Chromosome3 (Build37)
Map Location 65,951,084 - 65,952,270
singlet/doubletsinglet
Overlap geneVeph1
Upstream geneKcnab1, Ssr3, EG433604, EG667093, LOC100041083, 4931440P22Rik, Tiparp, LOC545530, LOC100040978, EG624866, Ccnl1, LOC625048, Tpi-rs2
Downstream genePtx3, LOC625115, Shox2, Rsrc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-327G20.bB6Ng01-327G20.g
ACCGA114979GA114980
length1,1831,169
definitionB6Ng01-327G20.b B6Ng01-327G20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatccttgaagaaaggtacagtgttcaagcttctatgtccgttg
cgttttcttttcaacctgcacctcagggtgattcttcacaggaaaacaat
ggcagcgtctgatgcgtcccagaaactttcccatctctccatggaaccac
atataaggattcccttcctttcctttgttttggttcttttctttcttttt
ttcttttctcaaagcacttgttacattctaacaacttccctactgcactt
atgtcttagttaaggtttgtattgttgtaatggaacaccataaccaaaaa
caacttggtttatttggcttacatttctatattgcatttattacatttct
atatttctatcattgaaagaaatcaggacaagagctcaaactgagcagga
acctggaggcagagaccatggaggatgctcttttctggcttgcttcccat
ggcttgctcagcctgctttcttacagaacccaagcttatcatcctaggaa
tggtaccacccacaagtcctcccctatcaatcactaatatcagaaaatgc
cctacacctggatcttatgtagtcatttttttcatttgaggttctatctt
ttcagataactctagcatgtgtcaagttgataaaaaaccaaccagagcaa
cttatttctcatttgtatatttatttcatgcattttccccagtaaaacag
tcttcatgaagccaaggttattgtactgaagtttttcaggcactagaatg
attctgtcatgtagcaggcactcaagaatatttataaatgaataaataaa
tgaagaataaatgggaaaataagcagaacatggaatttttagcgctttaa
gattaatcctgtgcacttgagaattgtactagtacacacacacacacaca
cacagacacacacacagagagacacacacccacacatgtggaagtagaag
tgatggatttcagagagaagttttaagaggaagagtgtgggtaggaaatg
atgtaaatacaatacccatgggatataatcctcagaataataaaagtaac
tttttaaaagcaaccttaaggttaagttaggtagccagatcagagacgta
aaggtcattgcaacttcaggacaaattttgtcttctttaatgagtaattt
catctgaattatctacaggtccgcataagttca
gaattcctgatctttcgaagacttttatcatgaatggatgttggatctta
tcaaattctttttccgcatctaacaagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacgttgatggatttccgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggatttggttagcgagaattttattgaggattttcgc
atcgatattcataagggaaattggtctgaagttttctatctttgttgcat
ctttctgtggcttaggtatcacagtaattgtggcttcatagaatgagttg
ggtagagttccctctacttctattttgtggaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactttgcactaaacccatctg
atcctgggatttttttggctgggagactattaatgactgtttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtctagaaatttgtccattttgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatgtgttgttatgtctccctttccatttctgattttgttaat
taggattttgtccctgtgccctctagtgagtttagctaagggtttatcta
tcttgtcgattttctcaaagaaccaactcctagttggttaattctttgaa
tagttcttcttgtttccacttggttgatttcactcctgagttttattatt
tcctgccgtctactcctcttgggtgaatttgcttcctttttttctagggc
ttttagatgtgttgtcaagctgctattatgtgctgtctcccgtttcttct
tggaggcactcagagctaatgagtttccctctttagaattgctttcattg
gtggtccataaggtttgggtacgttgttggcttccattttcattaaacct
ctaaaaagtcttaattttctttcctatatcgtcctttgaactaggtatcc
ttgagaaaagagtgcctaatacagttcacacgtgcatgtttgccttctcc
aattaatttatagtgtggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_65951084_65952270
seq2: B6Ng01-327G20.b_47_1229

seq1  GAATTCAATCCTTGAAGAAAGGTACAGTGTTCAAGCTTCTATGTCCGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCCTTGAAGAAAGGTACAGTGTTCAAGCTTCTATGTCCGTTG  50

seq1  CGTTTTCTTTTCAACCTGCACCTCAGGGTGATTCTTCACAGGAAAACAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTTCTTTTCAACCTGCACCTCAGGGTGATTCTTCACAGGAAAACAAT  100

seq1  GGCAGCGTCTGATGCGTCCCAGAAACTTTCCCATCTCTCCATGGAACCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCGTCTGATGCGTCCCAGAAACTTTCCCATCTCTCCATGGAACCAC  150

seq1  ATATAAGGATTCCCTTCCTTTCCTTTGTTTTGGTTCTTTTCTTTCTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGGATTCCCTTCCTTTCCTTTGTTTTGGTTCTTTTCTTTCTTTTT  200

seq1  TTCTTTTCTCAAAGCACTTGTTACATTCTAACAACTTCCCTACTGCACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCTCAAAGCACTTGTTACATTCTAACAACTTCCCTACTGCACTT  250

seq1  ATGTCTTAGTTAAGGTTTGTATTGTTGTAATGGAACACCATAACCAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTAGTTAAGGTTTGTATTGTTGTAATGGAACACCATAACCAAAAA  300

seq1  CAACTTGGTTTATTTGGCTTACATTTCTATATTGCATTTATTACATTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTGGTTTATTTGGCTTACATTTCTATATTGCATTTATTACATTTCT  350

seq1  ATATTTCTATCATTGAAAGAAATCAGGACAAGAGCTCAAACTGAGCAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCTATCATTGAAAGAAATCAGGACAAGAGCTCAAACTGAGCAGGA  400

seq1  ACCTGGAGGCAGAGACCATGGAGGATGCTCTTTTCTGGCTTGCTTCCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGAGGCAGAGACCATGGAGGATGCTCTTTTCTGGCTTGCTTCCCAT  450

seq1  GGCTTGCTCAGCCTGCTTTCTTACAGAACCCAAGCTTATCATCCTAGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGCTCAGCCTGCTTTCTTACAGAACCCAAGCTTATCATCCTAGGAA  500

seq1  TGGTACCACCCACAAGTCCTCCCCTATCAATCACTAATATCAGAAAATGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACCACCCACAAGTCCTCCCCTATCAATCACTAATATCAGAAAATGC  550

seq1  CCTACACCTGGATCTTATGTAGTCATTTTTTTCATTTGAGGTTCTATCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACACCTGGATCTTATGTAGTCATTTTTTTCATTTGAGGTTCTATCTT  600

seq1  TTCAGATAACTCTAGCATGTGTCAAGTTGATAAAAAACCAACCAGAGCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATAACTCTAGCATGTGTCAAGTTGATAAAAAACCAACCAGAGCAA  650

seq1  CTTATTTCTCATTTGTATATTTATTTCATGCATTTTCCCCAGTAAAACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTCTCATTTGTATATTTATTTCATGCATTTTCCCCAGTAAAACAG  700

seq1  TCTTCATGAAGCCAAGGTTATTGTACTGAAGTTTTTCAGGCACTAGAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATGAAGCCAAGGTTATTGTACTGAAGTTTTTCAGGCACTAGAATG  750

seq1  ATTCTGTCATGTAGCAGGCACTCAAGAATATTTATAAATGAATAAATAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTCATGTAGCAGGCACTCAAGAATATTTATAAATGAATAAATAAA  800

seq1  TGAAGAATAAATGGGAAAATAAGCAGAACATGGAATTTTTAGCGCTTTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAATAAATGGGAAAATAAGCAGAACATGGAATTTTTAGCGCTTTAA  850

seq1  GATTAATCCTGTGCACTTGAGAATTGTACTAGTACACACACACACACACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAATCCTGTGCACTTGAGAATTGTACTAGTACACACACACACACACA  900

seq1  CACAGACACACACACAGAGAGACACACAACCACACATGTGGAAGTAGAAG  950
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CACAGACACACACACAGAGAGACACACACCCACACATGTGGAAGTAGAAG  950

seq1  TGATGGATTTCAGAGAGAAGTTTTAAGAGGAAGAGTGTGGGTAGGAAATG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGATTTCAGAGAGAAGTTTTAAGAGGAAGAGTGTGGGTAGGAAATG  1000

seq1  ATGTAAATACAATACCCAT-GGATATAATCCTCAG-ATAAT-AAAGTAAC  1047
      ||||||||||||||||||| ||||||||||||||| ||||| ||||||||
seq2  ATGTAAATACAATACCCATGGGATATAATCCTCAGAATAATAAAAGTAAC  1050

seq1  TTTTTAAAAAGCAAACCTTAAGTTTAAGTTAGGTAGCAAGATTCAGAGGA  1097
      ||||| |||||| ||||||||| |||||||||||||| ||| ||||||  
seq2  TTTTT-AAAAGC-AACCTTAAGGTTAAGTTAGGTAGCCAGA-TCAGAG--  1095

seq1  ACGT-AAGGTCA-TGGAACTTCAAGACAAATTTTGTCTTCCTTTTAAATG  1145
      |||| ||||||| || ||||||| ||||||||||||||||   || ||||
seq2  ACGTAAAGGTCATTGCAACTTCAGGACAAATTTTGTCTTC---TTTAATG  1142

seq1  AACCTATTTTCATCTGATATAATCTACA-GTTCGCAT-AGTTCA  1187
      |   || |||||||||| || ||||||| || ||||| ||||||
seq2  A--GTAATTTCATCTGA-ATTATCTACAGGTCCGCATAAGTTCA  1183