BAC Information

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BAC

Clone NameB6Ng01-329C11
Chromosome3 (Build37)
Map Location 14,584,642 - 14,585,579
singlet/doubletsinglet
Overlap geneE2f5
Upstream gene0710005M24Rik, LOC100041667, LOC100039882, EG622229, LOC668062, Slc7a12, LOC668068, Lrrcc1
Downstream gene1810022K09Rik, LOC100039929, Car13, EG545507, Car1, LOC100041785, Car3, Car2, EG634323, LOC100039985, LOC751864, Sirpb1, LOC668101
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329C11.b
ACCGA116206
length935
definitionB6Ng01-329C11.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctggctatgatcttaatgtaaatttctaaatcttaatcatgcatt
gaatgcgcatttgttacctgttgtgaataaagaacttgctttataggtag
agaatttgaagtataggaaattggttgaactcggtttttttgtttttttg
gtttttttttgtttttgttttttgtttgtttgtttttatgtgacacccct
ttaaatggaatattgtggcacttaggtcctgccatattggtcctagtgta
ttttttatttcgcctgcctacctggtaacagctttccaagtttgaatact
attctgtctgtaaacattatttgcctcccattggtgagacagtgtttaaa
aacaactaatatttaaaggggaggtagttttcttccaaaggattgtctta
aggtttgtttattgttactataaactgagttgtgtgatagatgcaccttt
tgtggctttctttatagttctcttttttggctatcaagtcccactataga
aaatgtaatgttttaaaaataaacctgatgccctgtttgctaggcacagt
atacaaagttggggtgcagtggcgattccgatccctgcccacctgcttgg
tacagctgagcagtgtgagggacagagaaatgcagtgatgtcacgtgcag
tcatctgagtgaggatgagccctgaatgcttgactagctgaccacttggt
tggtggcactgtttgggaagctaagggggtggccttgctggagggagaac
agtactgcccgcattatgaaaggaataagtcttcggccacatctctttgt
gctcttgacttgaaacttgtgtttgaagatgtgaacccttagctctctgc
gctgcctagtgtgccttccctgccgcctgctgccatgcctcccgacatga
tggactcttctatctttgcgcgctctcgctttctc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_14584642_14585579
seq2: B6Ng01-329C11.b_42_976

seq1  GAATTCTGGCTATGATCTTAATGTAAATTTCTAAATCTTAATCATGCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGCTATGATCTTAATGTAAATTTCTAAATCTTAATCATGCATT  50

seq1  GAATGCACATTTGTTACCTGTTGTGAATAAAGAACTTGCTTTATAGGTAG  100
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCGCATTTGTTACCTGTTGTGAATAAAGAACTTGCTTTATAGGTAG  100

seq1  AGAATTTGAAGTATAGGAAATTGGTTGAACTCGGTTTTTTTGTTTTTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTGAAGTATAGGAAATTGGTTGAACTCGGTTTTTTTGTTTTTTTG  150

seq1  GTTTTTTTTTGTTTTTGTTTTTTGTTTGTTTGTTTTTATGTGACACCCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTTTGTTTTTGTTTTTTGTTTGTTTGTTTTTATGTGACACCCCT  200

seq1  TTAAATGGAATATTGTGGCACTTAGGTCCTGCCATATTGGTCCTAGTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGGAATATTGTGGCACTTAGGTCCTGCCATATTGGTCCTAGTGTA  250

seq1  TTTTTTATTTCGCCTGCCTACCTGGTAACAGCTTTCCAAGTTTGAATACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTATTTCGCCTGCCTACCTGGTAACAGCTTTCCAAGTTTGAATACT  300

seq1  ATTCTGTCTGTAGACATTATTTGCCTCCCATTGGTGAGACAGTGTTTAAA  350
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTCTGTAAACATTATTTGCCTCCCATTGGTGAGACAGTGTTTAAA  350

seq1  AACAACTAATATTTAAAGGGGAGGTAGTTTTCTTCCAAAGGATTGTCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACTAATATTTAAAGGGGAGGTAGTTTTCTTCCAAAGGATTGTCTTA  400

seq1  GGGTTTGTTTATTGTTACTATAAACTGAGTTGTGTGATAGATGCACCTTT  450
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTGTTTATTGTTACTATAAACTGAGTTGTGTGATAGATGCACCTTT  450

seq1  TGTGGCTTTCTTTATAGTTCTCTTTTTTGGCTATCAAGTCCCACTATAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCTTTCTTTATAGTTCTCTTTTTTGGCTATCAAGTCCCACTATAGA  500

seq1  AAATGTAATGTTTTAAAAATAAACCTGATGCCCTGTTTGCTAGGCACAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAATGTTTTAAAAATAAACCTGATGCCCTGTTTGCTAGGCACAGT  550

seq1  ATAGAAAGTTGGGGTGCAGTGGCGATTCCGATCCCTGCCCACCTGCTTGG  600
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAAGTTGGGGTGCAGTGGCGATTCCGATCCCTGCCCACCTGCTTGG  600

seq1  TACAGCTGAGCAGTGTGAGGGACAGAGAAATGCAGTGATGTCACGTGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCTGAGCAGTGTGAGGGACAGAGAAATGCAGTGATGTCACGTGCAG  650

seq1  TCATCTGAGTGAGGATGAGCCCTGTAGGCTTGACTAGCTGACCACTTGGT  700
      |||||||||||||||||||||||| | |||||||||||||||||||||||
seq2  TCATCTGAGTGAGGATGAGCCCTGAATGCTTGACTAGCTGACCACTTGGT  700

seq1  TGGTGGCACTGTTTGGGAAGCTAAGGGGGTGGCCTTGCTGGAGGGAGAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGCACTGTTTGGGAAGCTAAGGGGGTGGCCTTGCTGGAGGGAGAAC  750

seq1  AGTACTGCCAGCAGTATGAAAGGAAAAGGCCTTCGGCCACAGCTCTTTGT  800
      ||||||||| ||| ||||||||||| | | ||||||||||| ||||||||
seq2  AGTACTGCCCGCATTATGAAAGGAATAAGTCTTCGGCCACATCTCTTTGT  800

seq1  GCTCTTGACTTGAAGCTTGTGTTTGAAGATGTGAACCCTTAGCTTTCTGC  850
      |||||||||||||| ||||||||||||||||||||||||||||| |||||
seq2  GCTCTTGACTTGAAACTTGTGTTTGAAGATGTGAACCCTTAGCTCTCTGC  850

seq1  GCTGCCTAGTGTGCCTTCCCTGCCGCCTGCTGCCATGCCTCCCCGCCATG  900
      |||||||||||||||||||||||||||||||||||||||| |||| ||||
seq2  GCTGCCTAGTGTGCCTTCCCTGCCGCCTGCTGCCATGCCT-CCCGACATG  899

seq1  ATGGACTCTTTTTATCTTTTGCGCGCTCTCTCTTTCTC  938
      |||||||| || |||| ||||||||||||| |||||||
seq2  ATGGACTC-TTCTATC-TTTGCGCGCTCTCGCTTTCTC  935