BAC Information

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BAC

Clone NameB6Ng01-329J05
Chromosome3 (Build37)
Map Location 156,650,000 - 156,651,103
singlet/doubletsinglet
Overlap geneNegr1
Upstream geneLOC624519, LOC100040901, 4930570G19Rik, LOC100041152, LOC668853
Downstream geneLOC546818, Zranb2, Ptger3, LOC433686, LOC624684, Cth, Ankrd13c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329J05.bB6Ng01-329J05.g
ACCGA116501GA116502
length1,1881,101
definitionB6Ng01-329J05.b B6Ng01-329J05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttattagatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgatttgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccaatgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattcagccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagaacttccttaatttctttcttcagagatttgaagtttttatcata
cagatctttcactttcctttagttagagtcacgcccaagatattttatat
tatttgtgactatttgagaaagggtgttgttcccctaatttctttctcag
cctgtttattcttttgtatagagaaaggccattgacttgtttgagttatt
tttatatcaagctacttcacgaggcttgtttaatcaagttagaggttctt
gtaggaattttaagggttcactttattatacatcaattcatcttggcaaa
aggtgattttgaccgtccctgctttttcagatttgata
gaattctttttgaaaacttaccccattcataataactttatgacattgtc
tttgtgatagcagggtggtcggaccatatgtctatcatgcatccacattg
tttgaacctttggctttggacaccatggtatctccacacttcatcacctt
catagttggggatttggttgtagaacctggcactacagctccagagatgc
ttttaatttgtgcaggtgtcagtttttacaatgtgtgcaatctctgctgg
gcagccatctgtcacaaggacactcttcacggacaacaccgatttcccaa
ggttccaacagtgttgctaagtctctgtctccacagtgacactagaactg
tggtgcttgcaatatggccgtctcatatactgcaactagatgaacttcag
tgcatggtgcttcataatatccaatgaccactgtggattatgtgtgccct
tcctgcacttttgttcactatttagagtgtagtcgttgtacttatgagca
agttgactatgacacagtatgctcttttagcagcagcagcagcagccctg
tgcacagtgtgctgaccatatctgatgacattgaagtctatataggaaag
tctctgatgctcacacaatgactacacgttctacccacaactttcagaat
atcttcctatcatgatgctttcttgtgtgggcacataacagagtcatcta
gagagctttggatatatgtagatacaactccatttgtctgcagcaggtgt
ctgcaatggcaattttaagacatcccaggtgaacttgttgttcaggcctc
agcaagaacttacctgggagtctgctaagttgtagttgttgatataacag
agctgtctaatgtgagcttctgttgaggggacaatgctgcatgtcagtaa
accttagaagtgaaataaaaagctcacatctgggtcttgatctcattacc
tgatttcagttatttgaggattaatgttactttcaatgttgtgatctatt
tgatttttatttgctggtaatcctacgagtattttttaatcaggttcctt
atagtggcatctctacctcacacttgtatctatgcctggatccttctttc
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_156650000_156651103
seq2: B6Ng01-329J05.g_67_1167

seq1  GAATTCTTTTTGAAAACTTACCCCATTCATAATAACTTTATGACATTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTGAAAACTTACCCCATTCATAATAACTTTATGACATTGTC  50

seq1  TTTGTGATAGCAGGGTGGTCGGACCATATGTCTATCATGCATCCACATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGATAGCAGGGTGGTCGGACCATATGTCTATCATGCATCCACATTG  100

seq1  TTTGAACCTTTGGCTTTGGACACCATGGTATCTCCACACTTCATCACCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAACCTTTGGCTTTGGACACCATGGTATCTCCACACTTCATCACCTT  150

seq1  CATAGTTGGGGATTTGGTTGTAGAACCTGGCACTACAGCTCCAGAGATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTTGGGGATTTGGTTGTAGAACCTGGCACTACAGCTCCAGAGATGC  200

seq1  TTTTAATTTGTGCAGGTGTCAGTTTTTACAATGTGTGCAATCTCTGCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTTGTGCAGGTGTCAGTTTTTACAATGTGTGCAATCTCTGCTGG  250

seq1  GCAGCCATCTGTCACAAGGACACTCTTCACGGACAACACCGATTTCCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCATCTGTCACAAGGACACTCTTCACGGACAACACCGATTTCCCAA  300

seq1  GGTTCCAACAGTGTTGCTAAGTCTCTGTCTCCACAGTGACACTAGAACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCAACAGTGTTGCTAAGTCTCTGTCTCCACAGTGACACTAGAACTG  350

seq1  TGGTGCTTGCAATATGGCCGTCTCATATACTGCAACTAGATGAACTTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCTTGCAATATGGCCGTCTCATATACTGCAACTAGATGAACTTCAG  400

seq1  TGCATGGTGCTTCATAATATCCAATGACCACTGTGGATTATGTGTGCCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGGTGCTTCATAATATCCAATGACCACTGTGGATTATGTGTGCCCT  450

seq1  TCCTGCACTTTTGTTCACTATTTAGAGTGTAGTCGTTGTACTTATGAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCACTTTTGTTCACTATTTAGAGTGTAGTCGTTGTACTTATGAGCA  500

seq1  AGTTGACTATGACACAGTATGCTCTTTTAGCAGCAGCAGCAGCAGCCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGACTATGACACAGTATGCTCTTTTAGCAGCAGCAGCAGCAGCCCTG  550

seq1  TGCACAGTGTGCTGACCATATCTGATGACATTGAAGTCTATATAGGAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGTGTGCTGACCATATCTGATGACATTGAAGTCTATATAGGAAAG  600

seq1  TCTCTGATGCTCACACAATGACTACACGTTCTACCCACAACTTTCAGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGATGCTCACACAATGACTACACGTTCTACCCACAACTTTCAGAAT  650

seq1  ATCTTCCTATCATGATGCTTTCTTGTGTGGGCACATAACAGAGTCATCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCCTATCATGATGCTTTCTTGTGTGGGCACATAACAGAGTCATCTA  700

seq1  GAGAGCTTTGGATATATGTAGATACAACTCCATTTGTCTGCAGCAGGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCTTTGGATATATGTAGATACAACTCCATTTGTCTGCAGCAGGTGT  750

seq1  CTGCAATGGCAATTTTAAGACATCCCAGGTGAACTTGTTGTTCAGGCCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAATGGCAATTTTAAGACATCCCAGGTGAACTTGTTGTTCAGGCCTC  800

seq1  AGCAAGAACTTACCTGGGAGTCTGCTAAGTTGTAGTTGTTGATATAACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGAACTTACCTGGGAGTCTGCTAAGTTGTAGTTGTTGATATAACAG  850

seq1  AGCTGTCTAATGTGAGCTTCTGTTGAGGGGACAATGCTGCATGTCAGTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTCTAATGTGAGCTTCTGTTGAGGGGACAATGCTGCATGTCAGTAA  900

seq1  ACCTTAGAAGTGAAATAAAAAGCTCACATCTGGGTCTTTGATCTCATTAC  950
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ACCTTAGAAGTGAAATAAAAAGCTCACATCTGGGTC-TTGATCTCATTAC  949

seq1  CTGATTTCAGTTATTTGAAGATTAATGTTACTTTCAAATGTTTGTGATCT  1000
      |||||||||||||||||| |||||||||||||||| |||| |||||||||
seq2  CTGATTTCAGTTATTTGAGGATTAATGTTACTTTC-AATG-TTGTGATCT  997

seq1  ATTTTGATTTTTATTTGCT-GTTATCCTACGAGTAATTTTTTATTCAAGT  1049
      | ||||||||||||||||| || ||||||||||| |||||||| || || 
seq2  A-TTTGATTTTTATTTGCTGGTAATCCTACGAGT-ATTTTTTAATC-AGG  1044

seq1  TTCCTTATAGTTGCATCTCCTACTCACACTTTGTATCTAT---TGGCTGG  1096
      ||||||||||| |||||||   ||||||| ||||||||||   ||| |  
seq2  TTCCTTATAGTGGCATCTCTACCTCACAC-TTGTATCTATGCCTGGATCC  1093

seq1  TTCTTTCT  1104
      ||||||||
seq2  TTCTTTCT  1101