BAC Information

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BAC

Clone NameB6Ng01-329J10
Chromosome3 (Build37)
Map Location 32,033,075 - 32,176,217
singlet/doubletdoublet
Overlap geneKcnmb2, LOC665514
Upstream geneCldn11, Slc7a14, LOC625125
Downstream geneZmat3, 4930429B21Rik, Pik3ca, Kcnmb3, Zfp639, Mfn1, Gnb4, LOC100040977, Actl6a, Mrpl47, Ndufb5, Usp13, Pex2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329J10.bB6Ng01-329J10.g
ACCGA116511GA116512
length7941,159
definitionB6Ng01-329J10.b B6Ng01-329J10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,175,426 - 32,176,217)(32,033,075 - 32,034,229)
sequence
gaattcctccaagtgttagtccttataggtctgcactaaatattctattt
tttcctggaatgatgtggcctctttgttgctggtgttagtctgatattgg
aagccagtgtgttgaattatataacagacacagaagagcgattagtgtgt
gatcttacacatgtgtggaatatcaaagttatctccaaaacagaaaaggg
aagtggttcctaaactgttggaagaagaatgaggagagaaaatgatatta
aaaggacagcaaatgtgactaaattagtcagataggataaatacatttta
atgttcttttacatggcagagtgattgttgattatggtaatgtggaggga
tttatttaggctcatggtttcagagtatctcagtccatcgaggtgggcaa
gacatggaaggaataatagtgatcagaatattgtatatttttcttacaaa
gagagggaaccagagctatggcccaggctacactctgtataacaccagcc
ctggtgccctcttctgccagctagggctctatttcatatgagtgagtgcc
tcctccaatattgccaccctctggagaacaacatggagcaatggaagata
tttcagattcaatccacaacaacatgtttactactgaaagaacaaagtca
agttagaaggggttcaacaggcaggctaacgagaagtaaatagttggtag
agggttgacatctggttttgtggtaaaaaatagaagaaaattttgtgagc
tttacaatactttttttccacattacatattaattgggcattgc
gaattctctactttcctctgatctctggagcagcctcagttcccgtgctt
ttcacatttagatgggacacacagtgagccaagagggtagttggagtgag
ctaactagtgagagaggggtggagccaagcaacaactggcctcaatcctc
acaggagtggccttgtatttctcttcaccctgttgctccttccttatgca
tacgattatgaacagagatttcggtcccttgaagttgaaagttcactagg
gaaagggcacaagcactctgtccacactcccatagccaggtcttcttaag
agagtctcaactgacccaagttcaagcaccatcactcattgttctttatg
ccccatttcatggcctctccaattttattcatgtcttatctttgaggcct
agatcaggtccagttgaaaccactggcacctagttttgatggccccttgg
ttcatccttagagagctaaccttctgctctgtaactggaggaagaagcct
agaaaagaaggtaagaccctggagctctacaggtacaaaaacagcattaa
tcctgctcacaaaaactctgttctctgaagtcccacctcaaaagtaccca
tgaaattaaagtggcattcagacaagggctgggcatgtagcttagtgagt
agaacgcttgtctggcatgcagtttcaccaccagcaccaatgaaccactg
tggtagtgcagtgcacaccagtagtcctaggaccaaggaaaagtaaactg
ggaggtcagatgttttctaggtcatcctaagctacatattaaatttgaga
cccatctgggaaagaagggaagggcagagagaaataatctaatcttaata
actcttgataaaatagatttttagtaattatattacactagaaatattag
attatttaattgggaataactttcttgagagaagttacctgcccatcatc
agacatattagtaaaacatgaacattttgtaccaaacaagcacactgcag
agaatgtggctcttgtcaagaagggctgttccctgacataaacacaatta
ttttacaaatgacaagcagaaataaattaagactcattctgtgcttgaag
ttggatacaagaggcatgggaaggacagctcagaacttatcttttccaga
ctccctggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_32175426_32176217
seq2: B6Ng01-329J10.b_46_839 (reverse)

seq1  GCAATG-CCAAATAATATGTAATGTGGAAAAAAA-TATTGTAAAGCTCAC  48
      |||||| |||| |||||||||||||||||||||| |||||||||||||||
seq2  GCAATGCCCAATTAATATGTAATGTGGAAAAAAAGTATTGTAAAGCTCAC  50

seq1  AAATTATTCTTCTA-TTTTTACCACAAAACCAGATGTCAACCCTCTACCA  97
      ||| | |||||||| |||||||||||||||||||||||||||||||||||
seq2  AAAATTTTCTTCTATTTTTTACCACAAAACCAGATGTCAACCCTCTACCA  100

seq1  ACTATTTACTTCTCGTTAGCCTGCCTGTTTGAACCCCTTCTAACTTGACT  147
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ACTATTTACTTCTCGTTAGCCTGCCTG-TTGAACCCCTTCTAACTTGACT  149

seq1  TTGTTCTTTCAGTAGTAAACATGTTGTTGTGGATTGAATCTGAAATATCT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTTTCAGTAGTAAACATGTTGTTGTGGATTGAATCTGAAATATCT  199

seq1  TCCATTGCTCCATGTTGTTCTCCAGAGGGTGGCAATATTGGAGGAGGCAC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGCTCCATGTTGTTCTCCAGAGGGTGGCAATATTGGAGGAGGCAC  249

seq1  TCACTCATATGAAATAGAGCCCTAGCTGGCAGAAGAGGGCACCAGGGCTG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCATATGAAATAGAGCCCTAGCTGGCAGAAGAGGGCACCAGGGCTG  299

seq1  GTGTTATACAGAGTGTAGCCTGGGCCATAGCTCTGGTTCCCTCTCTTTGT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTATACAGAGTGTAGCCTGGGCCATAGCTCTGGTTCCCTCTCTTTGT  349

seq1  AAGAAAAATATACAATATTCTGATCACTATTATTCCTTCCATGTCTTGCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAATATACAATATTCTGATCACTATTATTCCTTCCATGTCTTGCC  399

seq1  CACCTCGATGGACTGAGATACTCTGAAACCATGAGCCTAAATAAATCCCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCGATGGACTGAGATACTCTGAAACCATGAGCCTAAATAAATCCCT  449

seq1  CCACATTACCATAATCAACAATCACTCTGCCATGTAAAAGAACATTAAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATTACCATAATCAACAATCACTCTGCCATGTAAAAGAACATTAAAA  499

seq1  TGTATTTATCCTATCTGACTAATTTAGTCACATTTGCTGTCCTTTTAATA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTATCCTATCTGACTAATTTAGTCACATTTGCTGTCCTTTTAATA  549

seq1  TCATTTTCTCTCCTCATTCTTCTTCCAACAGTTTAGGAACCACTTCCCTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTCTCTCCTCATTCTTCTTCCAACAGTTTAGGAACCACTTCCCTT  599

seq1  TTCTGTTTTGGAGATAACTTTGATATTCCACACATGTGTAAGATCACACA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTTGGAGATAACTTTGATATTCCACACATGTGTAAGATCACACA  649

seq1  CTAATCGCTCTTCTGTGTCTGTTATATAATTCAACACACTGGCTTCCAAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCGCTCTTCTGTGTCTGTTATATAATTCAACACACTGGCTTCCAAT  699

seq1  ATCAGACTAACACCAGCAACAAAGAGGCCACATCATTCCAGGAAAAAATA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGACTAACACCAGCAACAAAGAGGCCACATCATTCCAGGAAAAAATA  749

seq1  GAATATTTAGTGCAGACCTATAAGGACTAACACTTGGAGGAATTC  792
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTTAGTGCAGACCTATAAGGACTAACACTTGGAGGAATTC  794

seq1: chr3_32033075_32034229
seq2: B6Ng01-329J10.g_64_1222

seq1  GAATTCTCTACTTTCCTCTGATCTCTGGAGCAGCCTCAGTTCCCGTGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTACTTTCCTCTGATCTCTGGAGCAGCCTCAGTTCCCGTGCTT  50

seq1  TTCACATTTAGATGGGACACACAGTGAGCCAAGAGGGTAGTTGGAGTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATTTAGATGGGACACACAGTGAGCCAAGAGGGTAGTTGGAGTGAG  100

seq1  CTAACTAGTGAGAGAGGGGTGGAGCCAAGCAACAACTGGCCTCAATCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTAGTGAGAGAGGGGTGGAGCCAAGCAACAACTGGCCTCAATCCTC  150

seq1  ACAGGAGTGGCCTTGTATTTCTCTTCACCCTGTTGCTCCTTCCTTATGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGTGGCCTTGTATTTCTCTTCACCCTGTTGCTCCTTCCTTATGCA  200

seq1  TACGATTATGAACAGAGATTTCGGTCCCTTGAAGTTGAAAGTTCACTAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGATTATGAACAGAGATTTCGGTCCCTTGAAGTTGAAAGTTCACTAGG  250

seq1  GAAAGGGCACAAGCACTCTGTCCACACTCCCATAGCCAGGTCTTCTTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGGCACAAGCACTCTGTCCACACTCCCATAGCCAGGTCTTCTTAAG  300

seq1  AGAGTCTCAACTGACCCAAGTTCAAGCACCATCACTCATTGTTCTTTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCTCAACTGACCCAAGTTCAAGCACCATCACTCATTGTTCTTTATG  350

seq1  CCCCATTTCATGGCCTCTCCAATTTTATTCATGTCTTATCTTTGAGGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATTTCATGGCCTCTCCAATTTTATTCATGTCTTATCTTTGAGGCCT  400

seq1  AGATCAGGTCCAGTTGAAACCACTGGCACCTAGTTTTGATGGCCCCTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAGGTCCAGTTGAAACCACTGGCACCTAGTTTTGATGGCCCCTTGG  450

seq1  TTCATCCTTAGAGAGCTAACCTTCTGCTCTGTAACTGGAGGAAGAAGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCCTTAGAGAGCTAACCTTCTGCTCTGTAACTGGAGGAAGAAGCCT  500

seq1  AGAAAAGAAGGTAAGACCCTGGAGCTCTACAGGTACAAAAACAGCATTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGAAGGTAAGACCCTGGAGCTCTACAGGTACAAAAACAGCATTAA  550

seq1  TCCTGCTCACAAAAACTCTGTTCTCTGAAGTCCCACCTCAAAAGTACCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCTCACAAAAACTCTGTTCTCTGAAGTCCCACCTCAAAAGTACCCA  600

seq1  TGAAATTAAAGTGGCATTCAGACAAGGGCTGGGCATGTAGCTTAGTGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTAAAGTGGCATTCAGACAAGGGCTGGGCATGTAGCTTAGTGAGT  650

seq1  AGAACGCTTGTCTGGCATGCAGTTTCACCACCAGCACCAATGAACCACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACGCTTGTCTGGCATGCAGTTTCACCACCAGCACCAATGAACCACTG  700

seq1  TGGTAGTGCAGTGCACACCAGTAGTCCTAGGACCAAGGAAAAGTAAACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGTGCAGTGCACACCAGTAGTCCTAGGACCAAGGAAAAGTAAACTG  750

seq1  GGAGGTCAGATGTTTTCTAGGTCATCCTAAGCTACATATTAAATTTGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTCAGATGTTTTCTAGGTCATCCTAAGCTACATATTAAATTTGAGA  800

seq1  CCCATCTGGGAAAGAAGGGAAGGGCAGAGAGAAATAATCTAATCTTAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCTGGGAAAGAAGGGAAGGGCAGAGAGAAATAATCTAATCTTAATA  850

seq1  ACTCTTGATAAAATAGATTTTTAGTAATTATATTACACTAGAAATATTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTGATAAAATAGATTTTTAGTAATTATATTACACTAGAAATATTAG  900

seq1  ATTATTTAATTGGAAATAAC-TTCTTGAGAGAAGTTACCTG-CCATCATC  948
      ||||||||||||| |||||| |||||||||||||||||||| ||||||||
seq2  ATTATTTAATTGGGAATAACTTTCTTGAGAGAAGTTACCTGCCCATCATC  950

seq1  AGACATATTAAGTAAAACATGAACATTTTGTACCAAACAAGCACACTGCA  998
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AGACATATT-AGTAAAACATGAACATTTTGTACCAAACAAGCACACTGCA  999

seq1  GAGAATGTGGCTCTTGTCAAGAA-GGCTGTT-CCTGACATAAACACAAAT  1046
      ||||||||||||||||||||||| ||||||| |||||||||||||| |||
seq2  GAGAATGTGGCTCTTGTCAAGAAGGGCTGTTCCCTGACATAAACAC-AAT  1048

seq1  TTATTTACAAATGACAAGGCAAAAAATAAAATTAGAC-CATTC--GGCTT  1093
      |  |||||||||||||||   | ||||||| | |||| |||||   ||||
seq2  TATTTTACAAATGACAAG--CAGAAATAAATTAAGACTCATTCTGTGCTT  1096

seq1  GAGTTTTGATACAAGAAGGCATGG--AGGACAGCTCAAGGACTTATCTTT  1141
      ||  || |||||||| ||||||||  |||||||||| || ||||||||||
seq2  GAAGTTGGATACAAG-AGGCATGGGAAGGACAGCTC-AGAACTTATCTTT  1144

seq1  TCCAGACT-CCTGGG  1155
      |||||||| ||||||
seq2  TCCAGACTCCCTGGG  1159