BAC Information

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BAC

Clone NameB6Ng01-329O09
Chromosome3 (Build37)
Map Location 146,846,583 - 146,847,787
singlet/doubletsinglet
Overlap genenone
Upstream geneMcoln2, Edg7, Ssx2ip, Ctbs, Spata1, Gng5, Bxdc5, LOC100040473, Dnase2b, Uox, 4930503B20Rik, Gm1652, LOC670100, Prkacb, LOC100040540, Ttll7
Downstream genePpia-ps3_1528.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329O09.b
ACCGA116733
length1,189
definitionB6Ng01-329O09.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacccatcgagagcagcttcttcattctcaagaatgtcctacaga
aactcaaaggttgcgaacccagtggctaaaactcttcatactccagtaca
tctactgctgtcccactgaggaagagctgcttccattcttggcttgcatg
gtgactgggtctcacctcctcacatctctttactcagagacatttgcttc
catttctaagtctctcacaagagtgagtatgtacaattgattgactattt
ctgttcccctcaaattcctgtgttggatcactaatcccggtttggtggca
tctagacataaagtccttcaggaaggaattgagatataagggtgaaactc
tcaataaattgtataagtgagccgagaacaaaacctcagccatccatcgg
attagctttcttcctgccacttaaggataaaaagcacacaggttgtgcaa
accaggaagaggagcctgcaccacccagctcacatccgatttcaactctt
aacccgtaggaaggtgagaatagtgtgtgtgattggtgtttaaaccacca
agtctgtggtttcctattagagcagcctgaagtgattaaacagcatctat
attggcagaaactagttggtgtgtaaaacttccgcggcaaagtatctgac
ataatgtattccccgcgttttcaaacctctgtgctttaagaatcaagctg
ggcaatggttcaaatgggcactgaaagagcaaagcagcagagtgctaaga
ttccccctttcccgtggctcccattcagcccgccgagaacactgtgagga
aggccttgatggctgaacagtaccctcatttgggtaacattcaggggaat
acttttcttgctgatttccgttttacacaatgtgggctattttcaccagc
caagttcaacttctggttcatgccaccctggctctgagtctccgctgcaa
tctttctttcttctgggaaactcccagtctttaccacaactatgtgtgca
aactccagctcgctctctgactgcacattgctacctgagatgcaacctgt
atagcacttcttccattcccagcttcttcaagctctttgccaacagcttg
cctcttgcccaattctcatgatgggcaatattgccatatacacacacata
tgaagctggcagtaaacttgacgatgtctaatcaggtaa
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_146846583_146847787
seq2: B6Ng01-329O09.b_48_1236 (reverse)

seq1  TTACCTGATTTGACATCGTCAGTGTTTACTTGGCAAGCTTCCATTATGTG  50
      |||||||||| ||||||||||  |||||||  || ||||||   ||||||
seq2  TTACCTGATTAGACATCGTCA-AGTTTACT--GCCAGCTTC--ATATGTG  45

seq1  TGTG-ATATG--CATATGCCCCCATCATGAG-AGTGGGCAGGAGGGCAGC  96
      |||| |||||   ||||   ||||||||||| | |||||| ||||  |||
seq2  TGTGTATATGGCAATAT-TGCCCATCATGAGAATTGGGCAAGAGGCAAGC  94

seq1  GTGTGGCAAAAGGAGCCCTGAGGAGCTGGGGATGGGAGGAGTGCTTATAC  146
         |||||||  ||||    || ||||||| |||| || ||||| |||||
seq2  TGTTGGCAAA--GAGCTTGAAGAAGCTGGGAATGGAAGAAGTGC-TATAC  141

seq1  AGGGTTGCATTCCTCAGGGTAGGCAATGGTGCAGTCAGGAGGAGCGAGGC  196
      | ||||||||  |||| |||| ||||| ||||||||||   |||||| ||
seq2  A-GGTTGCAT--CTCA-GGTA-GCAAT-GTGCAGTCAG--AGAGCGA-GC  182

seq1  TGGAGTTTGCACACATAGTTGTGGTAAAGACTGGGGAGTTTCCCAAGAAG  246
      |||||||||||||||||||||||||||||||| ||||||||||| |||||
seq2  TGGAGTTTGCACACATAGTTGTGGTAAAGACT-GGGAGTTTCCC-AGAAG  230

seq1  AAAGAAAGATTGCAGCGGAGACTCAGAGCCAGGGTGGCATGAACCAGAAG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGATTGCAGCGGAGACTCAGAGCCAGGGTGGCATGAACCAGAAG  280

seq1  TTGAACTTGGCTGGTGAAAATAGCCCACATTGTGTAAAACGGAAATCAGC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTTGGCTGGTGAAAATAGCCCACATTGTGTAAAACGGAAATCAGC  330

seq1  AAGAAAAGTATTCCCCTGAATGTTACCCAAATGAGGGTACTGTTCAGCCA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAGTATTCCCCTGAATGTTACCCAAATGAGGGTACTGTTCAGCCA  380

seq1  TCAAGGCCTTCCTCACAGTGTTCTCGGCGGGCTGAATGGGAGCCACGGGA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGCCTTCCTCACAGTGTTCTCGGCGGGCTGAATGGGAGCCACGGGA  430

seq1  AAGGGGGAATCTTAGCACTCTGCTGCTTTGCTCTTTCAGTGCCCATTTGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGGAATCTTAGCACTCTGCTGCTTTGCTCTTTCAGTGCCCATTTGA  480

seq1  ACCATTGCCCAGCTTGATTCTTAAAGCACAGAGGTTTGAAAACGCGGGGA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTGCCCAGCTTGATTCTTAAAGCACAGAGGTTTGAAAACGCGGGGA  530

seq1  ATACATTATGTCAGATACTTTGCCGCGGAAGTTTTACACACCAACTAGTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTATGTCAGATACTTTGCCGCGGAAGTTTTACACACCAACTAGTT  580

seq1  TCTGCCAATATAGATGCTGTTTAATCACTTCAGGCTGCTCTAATAGGAAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCAATATAGATGCTGTTTAATCACTTCAGGCTGCTCTAATAGGAAA  630

seq1  CCACAGACTTGGTGGTTTAAACACCAATCACACACACTATTCTCACCTTC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGACTTGGTGGTTTAAACACCAATCACACACACTATTCTCACCTTC  680

seq1  CTACGGGTTAAGAGTTGAAATCGGATGTGAGCTGGGTGGTGCAGGCTCCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACGGGTTAAGAGTTGAAATCGGATGTGAGCTGGGTGGTGCAGGCTCCT  730

seq1  CTTCCTGGTTTGCACAACCTGTGTGCTTTTTATCCTTAAGTGGCAGGAAG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGGTTTGCACAACCTGTGTGCTTTTTATCCTTAAGTGGCAGGAAG  780

seq1  AAAGCTAATCCGATGGATGGCTGAGGTTTTGTTCTCGGCTCACTTATACA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTAATCCGATGGATGGCTGAGGTTTTGTTCTCGGCTCACTTATACA  830

seq1  ATTTATTGAGAGTTTCACCCTTATATCTCAATTCCTTCCTGAAGGACTTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTGAGAGTTTCACCCTTATATCTCAATTCCTTCCTGAAGGACTTT  880

seq1  ATGTCTAGATGCCACCAAACCGGGATTAGTGATCCAACACAGGAATTTGA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTAGATGCCACCAAACCGGGATTAGTGATCCAACACAGGAATTTGA  930

seq1  GGGGAACAGAAATAGTCAATCAATTGTACATACTCACTCTTGTGAGAGAC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAACAGAAATAGTCAATCAATTGTACATACTCACTCTTGTGAGAGAC  980

seq1  TTAGAAATGGAAGCAAATGTCTCTGAGTAAAGAGATGTGAGGAGGTGAGA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAATGGAAGCAAATGTCTCTGAGTAAAGAGATGTGAGGAGGTGAGA  1030

seq1  CCCAGTCACCATGCAAGCCAAGAATGGAAGCAGCTCTTCCTCAGTGGGAC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTCACCATGCAAGCCAAGAATGGAAGCAGCTCTTCCTCAGTGGGAC  1080

seq1  AGCAGTAGATGTACTGGAGTATGAAGAGTTTTAGCCACTGGGTTCGCAAC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTAGATGTACTGGAGTATGAAGAGTTTTAGCCACTGGGTTCGCAAC  1130

seq1  CTTTGAGTTTCTGTAGGACATTCTTGAGAATGAAGAAGCTGCTCTCGATG  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGTTTCTGTAGGACATTCTTGAGAATGAAGAAGCTGCTCTCGATG  1180

seq1  GGTGAATTC  1205
      |||||||||
seq2  GGTGAATTC  1189