BAC Information

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BAC

Clone NameB6Ng01-329O18
Chromosome3 (Build37)
Map Location 112,327,282 - 112,328,211
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC625585, EG229746, LOC668717
Downstream geneUtp14B-ps, EG433643, OTTMUSG00000022462, LOC668723, Amy2-2, Amy2-1, LOC100043684, LOC100043686, LOC100043688, LOC100043207, Amy1, Rnpc3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329O18.bB6Ng01-329O18.g
ACCGA116748GA116749
length1,199914
definitionB6Ng01-329O18.b B6Ng01-329O18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtaccccattttttaatagggttatttgaat
ttctggattccagcttcttgagctctttgtatatattgggtattagtccc
ctatcagatttaggattgatagagattctttcccaatctgttagtggcct
tttcatattattgacagtatcatttgccttacaaaagctttttatgagat
cccatttgtcaattcttgatcttacagcacaacccattgctgttctgttc
aggaatttttcccatgttcccatatcttcgaggctttttcccactttctc
ctttataagttttagtgtctctggttttatgtggagttccttgatccact
tagacttgagctttgtacaaaaagataagaatggatcaattcatgttctt
ctacatgataactgccagttgagtcagcagtgtttgttgaaaatgctgtc
ttttttttttccactggaaggttttagctccattgtcaagatcaagtgat
cataggtgtgtgggttcatttctaggtcttcaattctattccattgatct
acctgtatgtgactgtaccagtaccatgcagtttttatcacaattgctct
gtggtacagcctgaagtccacaagagtgattccactatgaatagtagaat
agttgagaatagttttgctatcttagtgtttttgttattccagatgaatt
tgcaaattgccctttctaactctgtgaataattgagttggaattttgatg
gaattgaacaaaaccatccaatatctacaagtggaagtagaaacaataaa
gaaaacccaaagtgagacaaccctaaagatagaaatcataggcgagaaat
ccggaaccatagatgccagcaccaggaatagaatataatagagcattttt
aaaattctccattgtacttacaaaaaggtatcaaatttaacatgctaaat
ttatttatttatttatctttcattacatatttttctttctatcccgaaag
ttccctatacctcctacgcctgtcccctatccgcccactaccactttctg
ccctgccatcgcctgtactgaaggcataataaggttgccatacaggcttc
tctttcccaatgaatgcagactgccattctctggctacattgcagctagg
aatgagttctgggatacgtaattagcttccaatgtgattccactcacta
gaattcttcagagttctggcttctttatcttcagtgttttattctgctcc
tttatattttcagcattagtagtatagatgttttggtaccatgagttcat
ggacaggtacccattgaaatgctaatgcactcataacagagcagaaagat
cagtaatttcaataaaaagttacaagtaagggggacttttggtatagcat
tggaaatgtaaatgagctaaatacctaataaaaaatgaaaaaaaaaaaaa
gttacaagttgctgaaacaatttctatagtagggtaaaaaatttatttat
acatacatacatacatacatacatacatacatacataaaacatacatata
tatgtgtatatatgcatatatatatacacatacatatatatgtgtatata
tacatatatatgtgtgtgtgtctgtgcgcacacatgggcgcatgtgtatg
tgtgtgtgtatctgtgtgtgaaacagaaaagagaagaaatttttacttat
gaaagaaagatgtttaacaatgatgcagtgtttgtgttttgagaaactac
attcatgctcttgaacaattgatgaaagaatactttgcctgatcctggag
gaacatatcagaagccccaaataacaaaaacaacagcgaacacatatact
cacacacacaaaggaagtcctggattaagaattatcctccctagccaggc
agtggtggcacacgcctttagtcccagcatttggaaggcagagacaggtg
gatttctcagtttgatgccagcctgatctacagagtgagttccaagacag
ccagggctatacagagaaaccctgtcttaaaatgaaagaaagaaagaaag
aaagagagagagagagagagagagagagagagagagagaggaaggaagga
agggaagggaaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_112327282_112328211
seq2: B6Ng01-329O18.g_63_976

seq1  GAATTCTTCAGAGTTCTGGCTTCTTTATCTTCAGTGTTTTATTCTGCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGAGTTCTGGCTTCTTTATCTTCAGTGTTTTATTCTGCTCC  50

seq1  TTTATATTTTCAGCATTAGTAGTATAGATGTTTTGGTACCATGAGTTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATTTTCAGCATTAGTAGTATAGATGTTTTGGTACCATGAGTTCAT  100

seq1  GGACAGGTACCCATTGAAATGCTAATGCACTCATAACAGAGCAGAAAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGGTACCCATTGAAATGCTAATGCACTCATAACAGAGCAGAAAGAT  150

seq1  CAGTAATTTCAATAAAAAGTTACAAGTAAGGGGGACTTTTGGTATAGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAATTTCAATAAAAAGTTACAAGTAAGGGGGACTTTTGGTATAGCAT  200

seq1  TGGAAATGTAAATGAGCTAAATACCTAATAAAAAATGAAAAAAAAAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATGTAAATGAGCTAAATACCTAATAAAAAATGAAAAAAAAAAAAA  250

seq1  GTTACAAGTTGCTGAAACAATTTCTATAGTAGGGTAAAAAATTTATTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACAAGTTGCTGAAACAATTTCTATAGTAGGGTAAAAAATTTATTTAT  300

seq1  ACATACATACATACATACATACATACATACATACATAAAACATACATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACATACATACATACATACATACATACATACATAAAACATACATATA  350

seq1  TATGTGTATATATGCATATATATATACACATACATATATATGTGTATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTATATATGCATATATATATACACATACATATATATGTGTATATA  400

seq1  TACATATATATGTGTGTGTGTCTGTGCGCACACATGGGCGCATGTGTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATATATGTGTGTGTGTCTGTGCGCACACATGGGCGCATGTGTATG  450

seq1  TGTGTGTGTATCTGTGTGTGAAACAGAAAAGAGAAGAAATTTTTACTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTATCTGTGTGTGAAACAGAAAAGAGAAGAAATTTTTACTTAT  500

seq1  GAAAGAAAGATGTTTAACAATGATGCAGTGTTTGTGTTTTGAGAAACTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGATGTTTAACAATGATGCAGTGTTTGTGTTTTGAGAAACTAC  550

seq1  ATTCATGCTCTTGAACAATTGATGAAAGAATACTTTGCCTGATCCTGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGCTCTTGAACAATTGATGAAAGAATACTTTGCCTGATCCTGGAG  600

seq1  GAACATATCAGAAGCCCCAAATAACAAAAACAACAGCGAACACATATACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATATCAGAAGCCCCAAATAACAAAAACAACAGCGAACACATATACT  650

seq1  CACACACACAAAGGAAGTCCTGGATTAAGAATTATCCTCCCTAGCCAGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACAAAGGAAGTCCTGGATTAAGAATTATCCTCCCTAGCCAGGC  700

seq1  AGTGGTGGCACACGCCTTTAGTCCCAGCATTTGGAAGGCAGAGACAGGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTGGCACACGCCTTTAGTCCCAGCATTTGGAAGGCAGAGACAGGTG  750

seq1  GATTTCTCAGTTTGATGCCAGCCTGATCTACAGAGTGAGTTCCAAGACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTCAGTTTGATGCCAGCCTGATCTACAGAGTGAGTTCCAAGACAG  800

seq1  CCAGGGCTATACAGAGAAACCCTGTCTTAAAATGAAAAGAAAAGAAAAGA  850
      |||||||||||||||||||||||||||||||||| |||||||   |||||
seq2  CCAGGGCTATACAGAGAAACCCTGTCTTAAAATG-AAAGAAA--GAAAGA  847

seq1  AAAGAAAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGA  900
      ||   |||||| |||| |||| |||| |||| |||| |||| |||| |||
seq2  AA--GAAAGAG-AGAG-AGAG-AGAG-AGAG-AGAG-AGAG-AGAG-AGA  887

seq1  GAGGGAAGGGAAGGGAAGGGAAGGGAAGGG  930
      || ||||||  | |||||||||||||||||
seq2  GA-GGAAGG--AAGGAAGGGAAGGGAAGGG  914