BAC Information

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BAC

Clone NameB6Ng01-329P08
Chromosome3 (Build37)
Map Location 154,125,194 - 154,126,179
singlet/doubletsinglet
Overlap geneLOC100040810
Upstream geneSt6galnac3, EG545578, Asb17, Msh4, Rabggtb, Acadm, Slc44a5, LOC100040980, Lhx8
Downstream geneLOC100040829, Tyw3, Cryz, BC007180, Tnni3k, Fpgt, Lrrc44, EG383956
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329P08.bB6Ng01-329P08.g
ACCGA116772GA116773
length1,223998
definitionB6Ng01-329P08.b B6Ng01-329P08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccttatagataaaatgttacataaaagggagttacggaaaggta
tcagtaacaagtgcaatgcagtgttttatacgataagctcactataagtt
cagtttttacatgccctggcctgatcatagtgcacacctgtggcttcatc
cttggacctgaatatttttccttgaacacaaatttgtcccaagcctattt
tctccttttagtgtaattttgaaagcttgttgtatcttttattatgcagc
ctttacttactattctgaggcacgggcactgtctattcctgattctaact
ttattacatctttctagcaaaacaactaaaaccatcttaaagctttcttc
ccaaaaggatttgaatcaaatcaggaattctatgaaatcattaattcatc
taaacagcattaattcatgaaagttcatctttaggttgatctatacgaaa
tctgctcaatagagtgggtgatgctctggaacccttagattatctatgac
aggaaaggcatatcagctgcaggaagcaacccagagatgaagcctcttga
gagcttgcctctcagagctcagccatcataagcctccaggaaggtcccct
ttcctcgatggctcctgacaagaaccacaagaataaaataggatgatata
ctaacagcagttatgaacttaagccttcataataggtgagcttttcctaa
aaaagcatagttttttaaatctccattcattttattatctttacaaaaga
ccaaagggaaaagatgctatgcagaactaaaaagccagccttccttttat
gaaggagacgacctttgcctttgttagaagaggttcagaaaccctggcag
gtcacagaggtcacagcagggctagaacccaagttcagtgccttaaatgt
tggctgattttatttccttaacttagaatcttccaacttcacttttggaa
atgttgggcatcggattgtccttcatgcctctgaaatgaattcttggatg
taatgaagcaattggggtattgaaatgttcaccaagctataggctggggc
attataattatctaataaaggcgtctaccttgggtaattcttcaaaatgc
taacaaatgggggaatacaggtagaaaacatcagaccatgggttctcaca
gggaagctaactcaacctgatggtaaggtgtctctagtctataggcctaa
cctggtgggggaacgtggcccga
gaattctgcccattcccccaaactctgttctcaggaaagaggcatgcgtt
tgttgtattaacccttaacaaacaatacatctcagagtaaaaggtgccat
gactgacagagcacacggttttagttcagatatgtggtgggcaaataagc
tgtatttagggacacaggaacttttgctacatttcagaattaatctcgta
aggatttgcttacgtacagaaccactattcaaaacaacattttggatagg
aaatccctttatatacttcaggctcaggaagccaggcaccgttattactg
agtaatgtgaacgcgtgagtcccgggtctgatagttcctgttgataggtt
ggcatctgccccggcagcttcccggtcagagagttctaataccaacactc
taatgtgatcaggaagcaaaaggacttcaaggcccagactgttgcagcct
cagttcttgaccacttaaaaagcgaggctcctttttcttcccctatggcc
atgttatctttacaagagcacactgaagcctttagctctgaacaatgatc
acgaatcaatgctgtgcacagtatctatgagcaggtgaactgacggggta
acgcacccatgtggtttacgtctctgttctccgagaaaaacatccagcgt
ctaataattgggtctggttgctgtagggttggtcggtgttatgtgaataa
ttgtgtctaattgctgtagggtcggttggtgttgtgtcggatggcacttt
ctctgcggatggacaaagctgaggtcataaaggcttctctaagccccttt
ccagaagagcaaaatataatcatctttccaggaggctggaggagagagaa
cttgcttttccacgtccctccccgtggatagtgatgggtttggtcaggtt
tcggctcagcggccctttcagcgttctgcctcaatttactgcttttcagt
ggtgaatctccttgaatatgcacctttcctcccttctgaatgggatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_154125194_154126179
seq2: B6Ng01-329P08.g_70_1067

seq1  GAATTCTGCCCATTCCCCCAAACTCTGTTCTCAGGAAAGAGGCATGCGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCCCATTCCCCCAAACTCTGTTCTCAGGAAAGAGGCATGCGTT  50

seq1  TGTTGTATTAACCCTTAACAAACAATACATCTCAGAGTAAAAGGTGCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTATTAACCCTTAACAAACAATACATCTCAGAGTAAAAGGTGCCAT  100

seq1  GACTGACAGAGCACACGGTTTTAGTTCAGATATGTGGTGGGCAAATAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGACAGAGCACACGGTTTTAGTTCAGATATGTGGTGGGCAAATAAGC  150

seq1  TGTATTTAGGGACACAGGAACTTTTGCTACATTTCAGAATTAATCTCGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTAGGGACACAGGAACTTTTGCTACATTTCAGAATTAATCTCGTA  200

seq1  AGGATTTGCTTACGTACAGAACCACTATTCAAAACAACATTTTGGATAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTGCTTACGTACAGAACCACTATTCAAAACAACATTTTGGATAGG  250

seq1  AAATCCCTTTATATACTTCAGGCTCAGGAAGCCAGGCACCGTTATTACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCCTTTATATACTTCAGGCTCAGGAAGCCAGGCACCGTTATTACTG  300

seq1  AGTAATGTGAACGCGTGAGTCCCGGGTCTGATAGTTCCTGTTGATAGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATGTGAACGCGTGAGTCCCGGGTCTGATAGTTCCTGTTGATAGGTT  350

seq1  GGCATCTGCCCCGGCAGCTTCCCGGTCAGAGAGTTCTAATACCAACACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCTGCCCCGGCAGCTTCCCGGTCAGAGAGTTCTAATACCAACACTC  400

seq1  TAATGTGATCAGGAAGCAAAAGGACTTCAAGGCCCAGACTGTTGCAGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTGATCAGGAAGCAAAAGGACTTCAAGGCCCAGACTGTTGCAGCCT  450

seq1  CAGTTCTTGACCACTTAAAAAGCGAGGCTCCTTTTTCTTCCCCTATGGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTTGACCACTTAAAAAGCGAGGCTCCTTTTTCTTCCCCTATGGCC  500

seq1  ATGTTATCTTTACAAGAGCACACTGAAGCCTTTAGCTCTGAACAATGATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTATCTTTACAAGAGCACACTGAAGCCTTTAGCTCTGAACAATGATC  550

seq1  ACGAATCAATGCTGTGCACAGTATCTATGAGCAGGTGAACTGACGGGGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAATCAATGCTGTGCACAGTATCTATGAGCAGGTGAACTGACGGGGTA  600

seq1  ACGCACCCATGTGGTTTACGTCTCTGTTCTCCGAGAAAAACATCCAGCGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCACCCATGTGGTTTACGTCTCTGTTCTCCGAGAAAAACATCCAGCGT  650

seq1  CTAATAATTGGGTCTGGTTGCTGTAGGGTTGGTCGGTGTTATGTGAATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAATTGGGTCTGGTTGCTGTAGGGTTGGTCGGTGTTATGTGAATAA  700

seq1  TTGTGTCTAATTGCTGTAGGGTCGGTTGGTGTTGTGTCGGATGGCACTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTCTAATTGCTGTAGGGTCGGTTGGTGTTGTGTCGGATGGCACTTT  750

seq1  CTCTGCGGATGGACAAAGCTGAGGTCATAAAGGCTTCTCTAAGCCCCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCGGATGGACAAAGCTGAGGTCATAAAGGCTTCTCTAAGCCCCTTT  800

seq1  CCAGAAGAGCAAAATATAATCATC-TTCCAGGAGGCTGGAGGAGAGAGAA  849
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CCAGAAGAGCAAAATATAATCATCTTTCCAGGAGGCTGGAGGAGAGAGAA  850

seq1  CTTGC-TTTCCACGT-CCTCCCCGTGGATAGTGATGGG-TTGGTCAGGTT  896
      ||||| ||||||||| |||||||||||||||||||||| |||||||||||
seq2  CTTGCTTTTCCACGTCCCTCCCCGTGGATAGTGATGGGTTTGGTCAGGTT  900

seq1  TCGGCTCAGCGGCCCTTCAGGCGTCCTG-CTCAATTTACTGC-TTTCAGT  944
      |||||||||||||||||   |||| ||| ||||||||||||| |||||||
seq2  TCGGCTCAGCGGCCCTTTCAGCGTTCTGCCTCAATTTACTGCTTTTCAGT  950

seq1  GGTGAATCTCCTTG-ATATGCAC---TTCTTCCTTCTGA--TGGATCT  986
      |||||||||||||| ||||||||   | || ||||||||   ||||||
seq2  GGTGAATCTCCTTGAATATGCACCTTTCCTCCCTTCTGAATGGGATCT  998