BAC Information

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BAC

Clone NameB6Ng01-330A22
Chromosome3 (Build37)
Map Location 71,555,887 - 71,557,037
singlet/doubletsinglet
Overlap genenone
Upstream geneEG625901, EG667377
Downstream geneLOC667385, LOC100041459
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330A22.bB6Ng01-330A22.g
ACCGA116840GA116841
length1,1471,185
definitionB6Ng01-330A22.b B6Ng01-330A22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcatcagaaagaagttagatagaaggtatttgccaatattcat
ctggataatgatcaccccactaaactaaatccagtaaggggaaggcttat
ttcccacaggattattaactgtacaagaagcacaggactgtgaaatttga
tcaatattcttataaaggtcgttgccactgaacatctgtttacaagtctt
agataatcagtcctagatgggatagcaatagcatgtaatttcctaatgat
tttccactacatagacgttgaaggttgaggtgtttactgatttgagatac
aagtctagtttctgtctatgaactttggataaagcccagttaatttcttc
aggaatgaatattggaaaaggatggtaaaattatggagacagtgttaaat
tgaagtcaacatgactttggaatgttcagctgatttttttgaaaattttg
tatattttgtcccaacttagaatttatttgtgttgcagtttgatacttct
tgcagtccattgtgaaatgcctaggctagaaaatgtcttaatttcagcaa
agagagcatcaggagccactcttgataggaccttgattattattactgta
aaactgcctggatggccaggaactagatacttaataaatagctcagagag
ttaggaaaaaacaaaacataactggtaaaataaaattcaaagatgtgatt
cctcatgatattttgatatcctcatagatatatgtcttgtccattcatca
tcagagaggctttctggcaacaaatggaagcaggtgcaaaaaaccagagc
caaacattatacatggatctaaaatagaagtatgtggcgatgcctatgga
ggccagaaaagggcattatatttcttggagctagagttagagacatttgt
gagaagctgcttggggtgctggatcacaaccccatcctctgcagagctaa
aagtcattttaatcaaggaacaaactctatagacgcttacttcacagtga
taggctagcctagaatgtcacttattgtctttagtgcatagaggaccaaa
ccatatttcaaaaatggaataaatatttactgtttcagaatacagctcaa
gtggggagtgcttcgtagcacttccaaggccttggcctgagtcaagc

gaattccgcacttacacgatctgaccctgggctttttttggttggtgaac
tattaatcagtgattctatatctttagtagatatagggctattttaatag
tttacttgattttgatttaactttggtaggtggaatctgtctgtaaaatt
ggacattttattaaaatttttaatattctggatttttggttattttcaat
atttggattttaaagtgagtcccaatgattctttaaattgttactgagtc
caggtttttttatttatcagattattttatttaactcaaataattttgcc
agtaaattattttcttttttcctctttttaattagatattttctttattt
acatttaaaattttatcccctttccacaattcccttgtgaaaaaccccct
atccaatccccctttaccctgctcactaacctacccactccccctttcct
gtcctggtattcccctacactggggcatcaatacttcacaaggccaaggg
cctctcctctcattgatgaccaacaagtccatcctctgctccatatgtga
ctgatgcattgagtccctccttgtgtactctttggttgatggttacgtcc
ctgagagctgttgaggtacttgttagttcatattgttgttcctcctatgg
gactgaaaccccctttcagctcctatggtcctttttctagctccttactg
gggaccttacgctcagtccaattcttggctgagagcatccacctctgtat
ttgtcagcactggcagagcctctcacggacagctattcaggctactgtca
gaaagtacttcttggcactcacaacagtgtctgagtttggtaactgcata
tgggatggatccacaggtgggagagtaattggacatttccttcagtttct
gctccaaactttgtctctgtatctcctcccatgggaattttgatccccct
tctagaaggaccgaagtatccacactctggtcttccttattcttcagctt
catgtggtctgtgaatgtatccttgttatttcaaactctgggctaatatc
tacctaaccagccgagtacaaaacattgtgtgtctttgtgattggtaacc
tcactcagtatgaaatttccagtccatcaatttgcttaagaccttatgga
attcatactttttaatagcgcgtaaaagatgatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_71555887_71557037
seq2: B6Ng01-330A22.b_46_1192

seq1  GAATTCTTCATCAGAAAGAAGTTAGATAGAAGGTATTTGCCAATATTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCATCAGAAAGAAGTTAGATAGAAGGTATTTGCCAATATTCAT  50

seq1  CTGGATAATGATCACCCCACTAAACTAAATCCAGTAAGGGGAAGGCTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATAATGATCACCCCACTAAACTAAATCCAGTAAGGGGAAGGCTTAT  100

seq1  TTCCCACAGGATTATTAACTGTACAAGAAGCACAGGACTGTGAAATTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCACAGGATTATTAACTGTACAAGAAGCACAGGACTGTGAAATTTGA  150

seq1  TCAATATTCTTATAAAGGTCGTTGCCACTGAACATCTGTTTACAAGTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATATTCTTATAAAGGTCGTTGCCACTGAACATCTGTTTACAAGTCTT  200

seq1  AGATAATCAGTCCTAGATGGGATAGCAATAGCATGTAATTTCCTAATGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATCAGTCCTAGATGGGATAGCAATAGCATGTAATTTCCTAATGAT  250

seq1  TTTCCACTACATAGACGTTGAAGGTTGAGGTGTTTACTGATTTGAGATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCACTACATAGACGTTGAAGGTTGAGGTGTTTACTGATTTGAGATAC  300

seq1  AAGTCTAGTTTCTGTCTATGAACTTTGGATAAAGCCCAGTTAATTTCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTAGTTTCTGTCTATGAACTTTGGATAAAGCCCAGTTAATTTCTTC  350

seq1  AGGAATGAATATTGGAAAAGGATGGTAAAATTATGGAGACAGTGTTAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATGAATATTGGAAAAGGATGGTAAAATTATGGAGACAGTGTTAAAT  400

seq1  TGAAGTCAACATGACTTTGGAATGTTCAGCTGATTTTTTTGAAAATTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTCAACATGACTTTGGAATGTTCAGCTGATTTTTTTGAAAATTTTG  450

seq1  TATATTTTGTCCCAACTTAGAATTTATTTGTGTTGCAGTTTGATACTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTGTCCCAACTTAGAATTTATTTGTGTTGCAGTTTGATACTTCT  500

seq1  TGCAGTCCATTGTGAAATGCCTAGGCTAGAAAATGTCTTAATTTCAGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTCCATTGTGAAATGCCTAGGCTAGAAAATGTCTTAATTTCAGCAA  550

seq1  AGAGAGCATCAGGAGCCACTCTTGATAGGACCTTGATTATTATTACTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGCATCAGGAGCCACTCTTGATAGGACCTTGATTATTATTACTGTA  600

seq1  AAACTGCCTGGATGGCCAGGAACTAGATACTTAATAAATAGCTCAGAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCCTGGATGGCCAGGAACTAGATACTTAATAAATAGCTCAGAGAG  650

seq1  TTAGGAAAAAACAAAACATAACTGGTAAAATAAAATTCAAAGATGTGATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAAAAAACAAAACATAACTGGTAAAATAAAATTCAAAGATGTGATT  700

seq1  CCTCATGATATTTTGATATCCTCATAGATATATGTCTTGTCCATTCATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATGATATTTTGATATCCTCATAGATATATGTCTTGTCCATTCATCA  750

seq1  TCAGAGAGGCTTTCTGGCAACAAATGGAAGCAGGTGCAAAAAACCAGAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGAGGCTTTCTGGCAACAAATGGAAGCAGGTGCAAAAAACCAGAGC  800

seq1  CAAACATTATACATGGATCTAAAATAGAAGTATGTGGCGATGCCTATGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATTATACATGGATCTAAAATAGAAGTATGTGGCGATGCCTATGGA  850

seq1  GGCCAGAAAAGGGCATTATATTTCTTGGAGCTAGAGTTAGAGACATTTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGAAAAGGGCATTATATTTCTTGGAGCTAGAGTTAGAGACATTTGT  900

seq1  GAGAAGCTGCTTGGGGTGCTGGATCACAACCCCATCCTCTGCAAGAGCTA  950
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GAGAAGCTGCTTGGGGTGCTGGATCACAACCCCATCCTCTGC-AGAGCTA  949

seq1  AAAGTCATTTTAATCAAGGAACAAACTCTATAGACGCTTACTTCACAGGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAAGTCATTTTAATCAAGGAACAAACTCTATAGACGCTTACTTCACA-GT  998

seq1  GATAGGCTAGCCTAAGAATGTCACTTAATTGTCTTTAGTGCATAGAGGAC  1050
      ||||||||||||| |||||||||||| |||||||||||||||||||||||
seq2  GATAGGCTAGCCT-AGAATGTCACTT-ATTGTCTTTAGTGCATAGAGGAC  1046

seq1  CAAACCATA-TTCAAAAATGGAATAAATA-TTACTGTTTCAG-ATACAGC  1097
      ||||||||| ||||||||||||||||||| |||||||||||| |||||||
seq2  CAAACCATATTTCAAAAATGGAATAAATATTTACTGTTTCAGAATACAGC  1096

seq1  TCAAAAGTGGAGTGCTTTCGTAGCACTCCCAAAGCCCTGGCCTGAGTGTC  1147
      ||||  | ||||||| ||||||||||| |||| ||| ||||||||  |||
seq2  TCAAGTGGGGAGTGC-TTCGTAGCACTTCCAAGGCCTTGGCCTGA--GTC  1143

seq1  AAGC  1151
      ||||
seq2  AAGC  1147


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