BAC Information

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BAC

Clone NameB6Ng01-330L14
Chromosome3 (Build37)
Map Location 77,155,867 - 77,156,915
singlet/doubletsinglet
Overlap genenone
Upstream geneFstl5, LOC100041625, LOC100041635
Downstream geneDnmt3a-ps1, EG626461, LOC667526, LOC626479
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330L14.bB6Ng01-330L14.g
ACCGA117298GA117299
length9931,046
definitionB6Ng01-330L14.b B6Ng01-330L14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacaactgaagaatctggaatggctgagaaacacctcaagaaatg
tttaaagtctttagtgatcagagaaatgcaaatcaaaatgaccctgagat
tctaccttacaccagacagaatggctaagatcaaaacctcaggtgacagc
acatgttggagagagtgtggagaaagaggaacagtcctccattgcccatg
ggattgtatactggtacaaccagtctggaaatcaatctgaagtttcctca
gaaaactggaaatagatttacctgaagagccagcatggaatatatcaaaa
agatgtcccaccatacaacaggggcacatgttccactatgtccacagcag
ccttatttgtgatacccagaagctggaaacaaccgaaatgacccgtgaca
gtaaatggatacagaaaatgtgattaatttacacaatggaatactactca
gctattaagaaggagggcatactgtagtttgcaggcaaatggatggaatt
agaaaatatcaacctgaatgagttaactcagacccaaaagaacatacatg
gtatgtactcacttataggtgaatattagccaaaaaggaaaaaaaaaaaa
aagaaaaggaagaaaaagcacagaatacccaagatacagtctacagaact
caaaaagttcaacaagcttaagtgcccaagtgagaatgtcttagactcac
ttgggagagagaagaaagcaatcacaagtggagagggagagagagacctg
agaacgaaagaaggcagtggaaggagagatggggagtgggaaacctgatc
tggtattgggtgatgtaaaaaggattgaagccctaagggccagcagaaaa
gatggaaacaggctacctcagaagtaggagattgggggtaccctctagaa
tgcaccataattcttgggaggtgagagagactctaaggagtccaaggcag
ggaccttatatgaatgcctgtacctcagaagatggcaaattta

gaattcaggactacccaccgtttttttcctatgagattcagtattactgg
tttcatgttgaggtcttcgacctatttcgattagagtttctgcagtgtct
tatatatggatctagttggattcttctcatgcagtaatccagtttgacca
gcatcatttttgaagatcttgtcctgttttccagtgacactaatatggct
gctgtcacaagtttactcctttcctggatccaaggtctgccttctaaggc
tgattgtacaggctgcaggactagtatttaaacctatttaaatttaagtt
taaatagtttcctatttaaattggaagcattctggtattcttgattgatt
ataagtgctttaatttcaacaaaatctccaaatcctacttttctatgaaa
atatgctgtctataaataattcattttatttgtacaaatatctgaacttg
ataattccgaaaactgattaaaataaatatgtggatatcatttgccatgc
acagattcatgcgagtattctatctacaacctttcttttacccctctttt
cttccttctcatcttcctcctcaaaatcctcctctcttctttctcctctt
cttcatttttatttgtacattttaacacatggaataagtctttctgtttt
gtttgattgtttgctctgaggttttgtccctatgttcatgaatcaacatt
gatttttgtgtcaccaaattcttacatttaaatgatgaacatataatcat
tttgctaatgtattaaactacgatgattgattttagtgcctgttttccta
ccatcaatccatgtgagtgcctattaagtatgcctttagagtattacctt
tgaagtggtattactttgtaagaaaattaacattaggtaaattttaaggt
attgcccacttctttcccttggaatattgttgtcctcacaccataaccac
tttagtcttcacccttgtttgctttttttctcattagaaaacagtatata
aatgatgatgatgatgatgatgatgatagtacctacataggacaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_77155867_77156915
seq2: B6Ng01-330L14.g_70_1115

seq1  GAATTCAGGACTACCCACCGTTTTTTTCCTATGAGATTCAGTATTACTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGACTACCCACCGTTTTTTTCCTATGAGATTCAGTATTACTGG  50

seq1  TTTCATGTTGAGGTCTTCGACCTATTTCGATTAGAGTTTCTGCAGTGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGTTGAGGTCTTCGACCTATTTCGATTAGAGTTTCTGCAGTGTCT  100

seq1  TATATATGGATCTAGTTGGATTCTTCTCATGCAGTAATCCAGTTTGACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATGGATCTAGTTGGATTCTTCTCATGCAGTAATCCAGTTTGACCA  150

seq1  GCATCATTTTTGAAGATCTTGTCCTGTTTTCCAGTGACACTAATATGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCATTTTTGAAGATCTTGTCCTGTTTTCCAGTGACACTAATATGGCT  200

seq1  GCTGTCACAAGTTTACTCCTTTCCTGGATCCAAGGTCTGCCTTCTAAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCACAAGTTTACTCCTTTCCTGGATCCAAGGTCTGCCTTCTAAGGC  250

seq1  TGATTGTACAGGCTGCAGGACTAGTATTTAAACCTATTTAAATTTAAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGTACAGGCTGCAGGACTAGTATTTAAACCTATTTAAATTTAAGTT  300

seq1  TAAATAGTTTCCTATTTAAATTGGAAGCATTCTGGTATTCTTGATTGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAGTTTCCTATTTAAATTGGAAGCATTCTGGTATTCTTGATTGATT  350

seq1  ATAAGTGCTTTAATTTCAACAAAATCTCCAAATCCTACTTTTCTATGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTGCTTTAATTTCAACAAAATCTCCAAATCCTACTTTTCTATGAAA  400

seq1  ATATGCTGTCTATAAATAATTCATTTTATTTGTACAAATATCTGAACTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCTGTCTATAAATAATTCATTTTATTTGTACAAATATCTGAACTTG  450

seq1  ATAATTCCGAAAACTGATTAAAATAAATATGTGGATATCATTTGCCATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTCCGAAAACTGATTAAAATAAATATGTGGATATCATTTGCCATGC  500

seq1  ACAGATTCATGCGAGTATTCTATCTACAACCTTTCTTTTACCCCTCTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATTCATGCGAGTATTCTATCTACAACCTTTCTTTTACCCCTCTTTT  550

seq1  CTTCCTTCTCATCTTCCTCCTCAAAATCCTCCTCTCTTCTTTCTCCTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCTCATCTTCCTCCTCAAAATCCTCCTCTCTTCTTTCTCCTCTT  600

seq1  CTTCATTTTTATTTGTACATTTTAACACATGGAATAAGTCTTTCTGTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTTTTATTTGTACATTTTAACACATGGAATAAGTCTTTCTGTTTT  650

seq1  GTTTGATTGTTTGCTCTGAGGTTTTGTCCCTATGTTCATGAATCAACATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGATTGTTTGCTCTGAGGTTTTGTCCCTATGTTCATGAATCAACATT  700

seq1  GATTTTTGTGTCACCAAATTCTTACATTTAAATGATGAACATATAATCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTGTGTCACCAAATTCTTACATTTAAATGATGAACATATAATCAT  750

seq1  TTTGCTAATGTATTAAACTACGATGATTGATTTTAGTGCCTGTTTTCCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTAATGTATTAAACTACGATGATTGATTTTAGTGCCTGTTTTCCTA  800

seq1  CCATCAATCCATGTGAGTGCCTATTAAGTATGCCTTTAGAGTATTACCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAATCCATGTGAGTGCCTATTAAGTATGCCTTTAGAGTATTACCTT  850

seq1  TGAAGTGGTATTACTTTGTAAGAAAATTAACATTAGGTAAA-TTTAAGGT  899
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGAAGTGGTATTACTTTGTAAGAAAATTAACATTAGGTAAATTTTAAGGT  900

seq1  ATTGCCCACTTCTTTCCCTTGGAATATTGTTGTCCTCACCACCATAACCA  949
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATTGCCCACTTCTTTCCCTTGGAATATTGTTGTCCTCA-CACCATAACCA  949

seq1  CTTTAGTCTTCACCCTTGTTTGC-TTTTTTCTCATTAGAAAACAGGTATA  998
      ||||||||||||||||||||||| |||||||||||||||||||| |||||
seq2  CTTTAGTCTTCACCCTTGTTTGCTTTTTTTCTCATTAGAAAACA-GTATA  998

seq1  TAAAATGATGATGATGATGATGATGATGATAAGTAACTACAATAGGACAA  1048
      | |||||||||||||||||||||||||||| |||| |||| |||||||||
seq2  T-AAATGATGATGATGATGATGATGATGAT-AGTACCTAC-ATAGGACAA  1045

seq1  A  1049
      |
seq2  A  1046


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