BAC Information

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BAC

Clone NameB6Ng01-331A18
Chromosome3 (Build37)
Map Location 141,739,184 - 141,836,177
singlet/doubletdoublet
Overlap genenone
Upstream genePdha2, Unc5c, LOC100039923, Bmpr1b
Downstream geneGabarapl2-ps3, Pdlim5, Gbp5, Gbp6, Gbp3, Gbp1, Gbp2, EG621605, Ccbl2, Gtf2b, Pkn2, LOC100040053, LOC100039883
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331A18.bB6Ng01-331A18.g
ACCGA117523GA117524
length2031,121
definitionB6Ng01-331A18.b B6Ng01-331A18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(141,835,975 - 141,836,177)(141,739,184 - 141,740,304)
sequence
tttgaactgcttttctgcccactggaggagttccctggacataacttatc
aatacttctcactctggactcctgtttttatcatgaaatctgttacaaaa
cataaaaacaatatccaattttgggctaaaacacctatttttaggagaca
taaaagactgcaaataaaacatcagagaggaggagaaggaggggagggag
agg
gaattcaatgccctcttcttggtcctcaggcactgggtatatatgtggtt
cacatatatacatgtagactaacactcacactcataacgtaaaattcagt
cattttaagtgaaaagaatataatcagggacctagagagatggcttagca
attaagaacattggttgctcttccagaagacccaagtttgatttggagca
cctacatgacagccaacaattgcctgttactgcagttgtaggtgacctac
catcctcttctacgccccatgggcacttcacatgcacacacacatacaca
cacacagtacacaaacacacagggctgtacacttatacacacattagtag
aattaataaatgaatatcttaagaatgtatataaccaacatttcttggag
tcattttagcaaataaaagtttcataaatatgtacaaatatgcctcaaaa
atgttactagatttatttaccatgatttaaaagcttaggaaaattaatcc
aatgaggaaaagatacattcaaatgcatcattttcactgggcatggtggc
tcatgcatttaatcccagcattcaggaagcagaggcaggcggatctctga
gtttgaggtcagtctgctctttagagcaaattccaggactaccagggctg
catagaggaatgcttactcattcataaataagtaaaccaaacaggcagac
atagttttcattcctcttgttgtagttcatttctttttataatagagatt
taaaaaatacaaagtgcaatctttcttcattatagtgaaccaggtcactc
taccatcttcacacaaaacaagcctccatcagggccatgctcctgatctc
ttttccttgcctctatagctcttaatgaagtatagactggttgaatctca
ttgaagcacctagtatctttttttctatttgggttcttttgggagggaga
atcatattaaggtattcccctactcatctccccacgggagtaaagccaag
caccccctctaactgatgccaactctggctccagatccctacacgtttca
tgtttacatgcactgctcttttactatattgtactgagacactgatcact
cgttagtgtaattggcctgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_141835975_141836177
seq2: B6Ng01-331A18.b_50_252 (reverse)

seq1  CCTCTCCCTCCCCTCCTTCTCCTCCTCTCTGATGTTTTATTTGCAGTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCCTCCCCTCCTTCTCCTCCTCTCTGATGTTTTATTTGCAGTCTT  50

seq1  TTATGTCTCCTAAAAATAGGTGTTTTAGCCCAAAATTGGATATTGTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTCTCCTAAAAATAGGTGTTTTAGCCCAAAATTGGATATTGTTTTT  100

seq1  ATGTTTTGTAACAGATTTCATGATAAAAACAGGAGTCCAGAGTGAGAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTGTAACAGATTTCATGATAAAAACAGGAGTCCAGAGTGAGAAGT  150

seq1  ATTGATAAGTTATGTCCAGGGAACTCCTCCAGTGGGCAGAAAAGCAGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATAAGTTATGTCCAGGGAACTCCTCCAGTGGGCAGAAAAGCAGTTC  200

seq1  AAA  203
      |||
seq2  AAA  203

seq1: chr3_141739184_141740304
seq2: B6Ng01-331A18.g_63_1183

seq1  GAATTCAATGCCCTCTTCTTGGTCCTCAGGCACTGGGTATATATGTGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGCCCTCTTCTTGGTCCTCAGGCACTGGGTATATATGTGGTT  50

seq1  CACATATATACATGTAGACTAACACTCACACTCATAACGTAAAATTCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATATACATGTAGACTAACACTCACACTCATAACGTAAAATTCAGT  100

seq1  CATTTTAAGTGAAAAGAATATAATCAGGGACCTAGAGAGATGGCTTAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAAGTGAAAAGAATATAATCAGGGACCTAGAGAGATGGCTTAGCA  150

seq1  ATTAAGAACATTGGTTGCTCTTCCAGAAGACCCAAGTTTGATTTGGAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGAACATTGGTTGCTCTTCCAGAAGACCCAAGTTTGATTTGGAGCA  200

seq1  CCTACATGACAGCCAACAATTGCCTGTTACTGCAGTTGTAGGTGACCTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACATGACAGCCAACAATTGCCTGTTACTGCAGTTGTAGGTGACCTAC  250

seq1  CATCCTCTTCTACGCCCCATGGGCACTTCACATGCACACACACATACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTCTTCTACGCCCCATGGGCACTTCACATGCACACACACATACACA  300

seq1  CACACAGTACACAAACACACAGGGCTGTACACTTATACACACATTAGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGTACACAAACACACAGGGCTGTACACTTATACACACATTAGTAG  350

seq1  AATTAATAAATGAATATCTTAAGAATGTATATAACCAACATTTCTTGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATAAATGAATATCTTAAGAATGTATATAACCAACATTTCTTGGAG  400

seq1  TCATTTTAGCAAATAAAAGTTTCATAAATATGTACAAATATGCCTCAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTAGCAAATAAAAGTTTCATAAATATGTACAAATATGCCTCAAAA  450

seq1  ATGTTACTAGATTTATTTACCATGATTTAAAAGCTTAGGAAAATTAATCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTACTAGATTTATTTACCATGATTTAAAAGCTTAGGAAAATTAATCC  500

seq1  AATGAGGAAAAGATACATTCAAATGCATCATTTTCACTGGGCATGGTGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGGAAAAGATACATTCAAATGCATCATTTTCACTGGGCATGGTGGC  550

seq1  TCATGCATTTAATCCCAGCATTCAGGAAGCAGAGGCAGGCGGATCTCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCATTTAATCCCAGCATTCAGGAAGCAGAGGCAGGCGGATCTCTGA  600

seq1  GTTTGAGGTCAGTCTGCTCTTTAGAGCAAATTCCAGGACTACCAGGGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAGGTCAGTCTGCTCTTTAGAGCAAATTCCAGGACTACCAGGGCTG  650

seq1  CATAGAGGAATGCTTACTCATTCATAAATAAGTAAACCAAACAGGCAGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAGGAATGCTTACTCATTCATAAATAAGTAAACCAAACAGGCAGAC  700

seq1  ATAGTTTTCATTCCTCTTGTTGTAGTTCATTTCTTTTTATAATAGAGATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTTCATTCCTCTTGTTGTAGTTCATTTCTTTTTATAATAGAGATT  750

seq1  TAAAAAATACAAAGTGCAATCTTTCTTCATTATAGTGAACCAGGTCACTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATACAAAGTGCAATCTTTCTTCATTATAGTGAACCAGGTCACTC  800

seq1  TACCATCTTCACACAAAACAAGCCTCCATCAGGGGCCATGCTCCTGATCT  850
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TACCATCTTCACACAAAACAAGCCTCCATCA-GGGCCATGCTCCTGATCT  849

seq1  CTTTTCCTTGCCTCTATAGCTCTTAATGAAGTATAGACTGGTTGAATCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCTTGCCTCTATAGCTCTTAATGAAGTATAGACTGGTTGAATCTC  899

seq1  ATTGAAGCACCTAGTATC-TTTTTTCTATTT-GGTTCTTTTGGGAGGGAG  948
      |||||||||||||||||| |||||||||||| ||||||||||||||||||
seq2  ATTGAAGCACCTAGTATCTTTTTTTCTATTTGGGTTCTTTTGGGAGGGAG  949

seq1  AATCATATT-AGGTATT-CCCTACTCATCTCCCCACGGGAGTAAAGCCAA  996
      ||||||||| ||||||| ||||||||||||||||||||||||||||||||
seq2  AATCATATTAAGGTATTCCCCTACTCATCTCCCCACGGGAGTAAAGCCAA  999

seq1  GCACCCCCTCTAAACTGATGCCAACTCTGGCTTCCAGATCCTTACAACGT  1046
      ||||||||||| ||||||||||||||||||| ||||||||| ||| ||||
seq2  GCACCCCCTCT-AACTGATGCCAACTCTGGC-TCCAGATCCCTAC-ACGT  1046

seq1  TTCATGTTTACATGCACTGCTCTTTTACTATATTGTACTGGAGACACTTG  1096
      ||||||||||||||||||||||||||||||||||||||| ||||||| ||
seq2  TTCATGTTTACATGCACTGCTCTTTTACTATATTGTACT-GAGACAC-TG  1094

seq1  TTCACCCG-TAGTGTAATTGG-CTGAA  1121
       |||| || |||||||||||| |||||
seq2  ATCACTCGTTAGTGTAATTGGCCTGAA  1121