BAC Information

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BAC

Clone NameB6Ng01-331N22
Chromosome3 (Build37)
Map Location 109,081,640 - 109,082,617
singlet/doubletsinglet
Overlap genenone
Upstream genePsma5, Sort1, Mybphl, Psrc1, Celsr2, Sars, 5330417C22Rik, 1700013F07Rik, 2010200O16Rik, Taf13, Wdr47, LOC100043166, Clcc1, Gpsm2, 4921525H12Rik, Stxbp3a, Fndc7, Prpf38b, 4921515J06Rik, B430201A12Rik, 4930443G12Rik, Slc25a24
Downstream geneVav3, Ntng1, LOC100043181, LOC100043183, Prmt6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331N22.bB6Ng01-331N22.g
ACCGA118128GA118129
length1,102978
definitionB6Ng01-331N22.b B6Ng01-331N22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtg
ggccttctgggttctgatgatggtgagtggtcctggcttctgttagtagg
attcttacgtttacctttcaccatctggcaatctctggagttagttgtta
tagttgtctttgttaagagattgttcctctgttgattttgttaccctctc
tcagcaggcgtgggagacaagctctcttctctgagtttcagtggtcagag
cagtctctgtaggcaagctctcctctttcagggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt
cgcagatgttgccacctgagaagctctgtggctcttgccgggaaggtggc
tggttgtctggagctgaagatggcgccgcccagaagctctgcgactctcg
cccgtcccagaaacggctggcactctgtattccacacggtcacccgtgca
gcctgccctccgcggagtcccggagccaagaaggctcccgccggcgcctg
tgccacaaacctctcaggccaggcagacccccgtgctctcaccaggaagg
tggccggctgtctggagctgaagatggcgccgcccagaagctctgcgact
ctcgcccgtcctagaaacggctggcactctgtattccacacggtcacccg
tgcagcctgccctccgtggagtcccgggagccaagaaggctcccgccggc
gcctgtgccacaaacctcctttggtgaccaattatatagtcagttttgga
gaaggtatcatgaggtgctgaagaagaaggtatattcttttgctttagga
tgaaatgtttctagaaaagctgttaaatccatttgggttcataacttctg
tagtttccactgtgtcctctgatttagtttctgtttccatgaatcagtca
ttgaatgaaaagaaaggggttgtttgaaagtctcttcactcatatattgc
ta
gaattctgtagggtgggagagatgatgctacccctctctgtctctctgtt
tctctatctttctgtttctctctgactctgtctctgtctcactgtgtctc
tcttccctctctgtctctgtatgtctctttctctgtgtctctccgggtct
ttgtatctctgtcttgtctctgtgtttctctctttcctgtcttctctctc
attctctgtcctcccaaatctcacacagatgcctctgttggtagacctaa
aacagaaatgtagtttcccaagactcagaagtgctggtggaaaggctggg
aagtttagttttcaagactcagagcccctaagatacagagttcatagaag
ggtgtggaactgggcttacacccaaacaaaagtcaagacaaccacagcta
caataatactaatagtgccaaggcttggcagcagatgcagggcctccagc
acccacgaaggagagtgcttgtgtgtgaatctgactcttcttgggttctg
atagctctgggacagccaggctcttttctgtccagcccttactgcctaaa
atgccagaattgatttcccttctgacaaagtacctctctgacaactgttt
ttccatttcctttgtataacaaaaacaattttttgaagtcatggaacctt
cagtgacaagctgatttgaatcttcccaacttcagcagctatcatttggc
gacctgtttgctacactcccatgcctttctgaacagggttcactcaatca
agagttcgtataatgagcagacaaaatattttccaagagaaaaagaaagc
atggtacaatgctgtctttttttaacaatgtcttaatttctagcacagta
cagtattgcctaagaattgagcctaagaattaaagttgtgaacagaaaca
ccccccccctctctctctctgtgtgtgtgtgtgtgtgtgtgtgtgtattc
cgagaagaaatctgtttttaaaatgtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_109081640_109082617
seq2: B6Ng01-331N22.g_65_1042 (reverse)

seq1  ATACATTTTAAAAACAGATCTCTTTATAGAAATACACACACACACACACA  50
      ||||||||||||||||||| || || | | ||||||||||||||||||||
seq2  ATACATTTTAAAAACAGATTTC-TTCTCGGAATACACACACACACACACA  49

seq1  CACACACACAGAGAGAGAGA-GGGGGGGGTGTTTCTGTTCACAACCTTAA  99
      |||||||||||||||||||| |||||||||||||||||||||||| ||||
seq2  CACACACACAGAGAGAGAGAGGGGGGGGGTGTTTCTGTTCACAACTTTAA  99

seq1  TTCTTAGGCTCAATTCTTAGGCAATACTGTACTGTGCTAGAAATTAAGAC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAGGCTCAATTCTTAGGCAATACTGTACTGTGCTAGAAATTAAGAC  149

seq1  ATTGTTAAAAAAAGACAGCATTGTACCATGCTTTCTTTTTCTCTTGGAAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTAAAAAAAGACAGCATTGTACCATGCTTTCTTTTTCTCTTGGAAA  199

seq1  ATATTTTGTCTGCTCATTATACGAACTCTTGATTGAGTGAACCCTGTTCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTGTCTGCTCATTATACGAACTCTTGATTGAGTGAACCCTGTTCA  249

seq1  GAAAGGCATGGGAGTGTAGCAAACAGGTCGCCAAATGATAGCTGCTGAAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGCATGGGAGTGTAGCAAACAGGTCGCCAAATGATAGCTGCTGAAG  299

seq1  TTGGGAAGATTCAAATCAGCTTGTCACTGAAGGTTCCATGACTTCAAAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAAGATTCAAATCAGCTTGTCACTGAAGGTTCCATGACTTCAAAAA  349

seq1  ATTGTTTTTGTTATACAAAGGAAATGGAAAAACAGTTGTCAGAGAGGTAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTTTGTTATACAAAGGAAATGGAAAAACAGTTGTCAGAGAGGTAC  399

seq1  TTTGTCAGAAGGGAAATCAATTCTGGCATTTTAGGCAGTAAGGGCTGGAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCAGAAGGGAAATCAATTCTGGCATTTTAGGCAGTAAGGGCTGGAC  449

seq1  AGAAAAGAGCCTGGCTGTCCCAGAGCTATCAGAACCCAAGAAGAGTCAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGAGCCTGGCTGTCCCAGAGCTATCAGAACCCAAGAAGAGTCAGA  499

seq1  TTCACACACAAGCACTCTCCTTCGTGGGTGCTGGAGGCCCTGCATCTGCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACACACAAGCACTCTCCTTCGTGGGTGCTGGAGGCCCTGCATCTGCT  549

seq1  GCCAAGCCTTGGCACTATTAGTATTATTGTAGCTGTGGTTGTCTTGACTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGCCTTGGCACTATTAGTATTATTGTAGCTGTGGTTGTCTTGACTT  599

seq1  TTGTTTGGGTGTAAGCCCAGTTCCACACCCTTCTATGAACTCTGTATCTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGGGTGTAAGCCCAGTTCCACACCCTTCTATGAACTCTGTATCTT  649

seq1  AGGGGCTCTGAGTCTTGAAAACTAAACTTCCCAGCCTTTCCACCAGCACT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCTCTGAGTCTTGAAAACTAAACTTCCCAGCCTTTCCACCAGCACT  699

seq1  TCTGAGTCTTGGGAAACTACATTTCTGTTTTAGGTCTACCAACAGAGGCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTCTTGGGAAACTACATTTCTGTTTTAGGTCTACCAACAGAGGCA  749

seq1  TCTGTGTGAGATTTGGGAGGACAGAGAATGAGAGAGAAGACAGGAAAGAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTGAGATTTGGGAGGACAGAGAATGAGAGAGAAGACAGGAAAGAG  799

seq1  AGAAACACAGAGACAAGACAGAGATACAAAGACCCGGAGAGACACAGAGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACACAGAGACAAGACAGAGATACAAAGACCCGGAGAGACACAGAGA  849

seq1  AAGAGACATACAGAGACAGAGAGGGAAGAGAGACACAGTGAGACAGAGAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGACATACAGAGACAGAGAGGGAAGAGAGACACAGTGAGACAGAGAC  899

seq1  AGAGTCAGAGAGAAACAGAAAGATAGAGAAACAGAGAGACAGAGAGGGGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCAGAGAGAAACAGAAAGATAGAGAAACAGAGAGACAGAGAGGGGT  949

seq1  AGCATCATCTCTCCCACCCTACAGAATTC  978
      |||||||||||||||||||||||||||||
seq2  AGCATCATCTCTCCCACCCTACAGAATTC  978