BAC Information

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BAC

Clone NameB6Ng01-333B18
Chromosome3 (Build37)
Map Location 119,249,891 - 119,250,918
singlet/doubletsinglet
Overlap genenone
Upstream geneDpyd, LOC100043275
Downstream geneLOC100043278, Ptbp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-333B18.bB6Ng01-333B18.g
ACCGA119016GA119017
length1,1821,025
definitionB6Ng01-333B18.b B6Ng01-333B18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggaatgcaggcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatgtacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgaatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagacttatgccggggcctagcaaa
cacaatagtggatgctcacagtcagctaatggatggatcatagggctctc
aatggaggagctagagaaagtagcctaaggagctaaagggatctgcaacc
ctatagtggaacaacattatgaactaaccagtacccggagcttcttgact
ctagctgcatattatatcaaaagaatgggctagtcggccatccactggga
aaggaggccattgacctgccaactctattatgtcctcagtacagggatca
ctaggccaaaagggaagtgggtggcaggggag
gaattcccacttcaactttacagctttaaatattccatttattgcactcc
caatgattctcttatggaaaccacagacgcttctttgttttctaaactat
atgtttaaaataaaatatgagtttatttatttctagctgtattgtttctt
tttcttttcataaaaagataatatctttcaaattccttttcatttgttaa
acgcacacatatatacacatgcatacagcacacatgcacacacctatcca
ttctgtatcttttctgaggtttacactgggatctaatagtctcttttgtc
ttagtctattcctatttgctgctactataaaataactaagtgaccaaaat
aaatcatattttttaaattgtgttgaatttatgattgaccatcattatgc
taaaagatgcctacccttgtatgatgactgctataatgttactcacacaa
gtgcagtcaaacacacataggaagaaagcccattttctgtcaaatggatt
tctgtcacttccatattccaccctctgcttctgaatgctgatagaacaga
gtgatgcattcagatgtctaataaaaaaggttgtacctttaaaagaaagc
atttttaatcctaagtgtttcatgacaagcagaagatagccctgaaattc
atccattgaacttccaactattaaatggaaaattctgaaactgaatatac
ctattcaataaacaaaatatgatgggctgtgaccctgcatgtctggttta
cactaaaagcatacaaacaaatatttgctcaaaaattcaatttcatatac
aaccaagctatttattaagtctttgtcactttgtcatagattggtatgta
atggagacatcagaagcatctaagaattgtggaggccagtcctctacaga
gtaaaaattgtcagcacaaaacttgaacctaacttgtttctgtctcactc
tttaatgagcaattctgagccctatggagtgattatttacaacaaaaaaa
aaatcaatgtatatgcagatcagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_119249891_119250918
seq2: B6Ng01-333B18.g_65_1089

seq1  GAATTCCCACTTCAACTTTACAGCTTTAAATATTCCATTTATTGCACTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCACTTCAACTTTACAGCTTTAAATATTCCATTTATTGCACTCC  50

seq1  CAATGATTCTCTTATGGAAACCACAGACGCTTCTTTGTTTTCTAAACTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGATTCTCTTATGGAAACCACAGACGCTTCTTTGTTTTCTAAACTAT  100

seq1  ATGTTTAAAATAAAATATGAGTTTATTTATTTCTAGCTGTATTGTTTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTAAAATAAAATATGAGTTTATTTATTTCTAGCTGTATTGTTTCTT  150

seq1  TTTCTTTTCATAAAAAGATAATATCTTTCAAATTCCTTTTCATTTGTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTCATAAAAAGATAATATCTTTCAAATTCCTTTTCATTTGTTAA  200

seq1  ACGCACACATATATACACATGCATACAGCACACATGCACACACCTATCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCACACATATATACACATGCATACAGCACACATGCACACACCTATCCA  250

seq1  TTCTGTATCTTTTCTGAGGTTTACACTGGGATCTAATAGTCTCTTTTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTATCTTTTCTGAGGTTTACACTGGGATCTAATAGTCTCTTTTGTC  300

seq1  TTAGTCTATTCCTATTTGCTGCTACTATAAAATAACTAAGTGACCAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCTATTCCTATTTGCTGCTACTATAAAATAACTAAGTGACCAAAAT  350

seq1  AAATCATATTTTTTAAATTGTGTTGAATTTATGATTGACCATCATTATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATATTTTTTAAATTGTGTTGAATTTATGATTGACCATCATTATGC  400

seq1  TAAAAGATGCCTACCCTTGTATGATGACTGCTATAATGTTACTCACACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGATGCCTACCCTTGTATGATGACTGCTATAATGTTACTCACACAA  450

seq1  GTGCAGTCAAACACACATAGGAAGAAAGCCCATTTTCTGTCAAATGGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGTCAAACACACATAGGAAGAAAGCCCATTTTCTGTCAAATGGATT  500

seq1  TCTGTCACTTCCATATTCCACCCTCTGCTTCTGAATGCTGATAGAACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCACTTCCATATTCCACCCTCTGCTTCTGAATGCTGATAGAACAGA  550

seq1  GTGATGCATTCAGATGTCTAATAAAAAAGGTTGTACCTTTAAAAGAAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGCATTCAGATGTCTAATAAAAAAGGTTGTACCTTTAAAAGAAAGC  600

seq1  ATTTTTAATCCTAAGTGTTTCATGACAAGCAGAAGATAGCCCTGAAATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAATCCTAAGTGTTTCATGACAAGCAGAAGATAGCCCTGAAATTC  650

seq1  ATCCATTGAACTTCCAACTATTAAATGGAAAATTCTGAAACTGAATATAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATTGAACTTCCAACTATTAAATGGAAAATTCTGAAACTGAATATAC  700

seq1  CTATTCAATAAACAAAATATGATGGGCTGTGACCCTGCATGTCTGGTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCAATAAACAAAATATGATGGGCTGTGACCCTGCATGTCTGGTTTA  750

seq1  CACTAAAAGCATACAAACAAATATTTGCTCAAAAATTCAATTTCATATAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAAAGCATACAAACAAATATTTGCTCAAAAATTCAATTTCATATAC  800

seq1  AACCAAGCTATTTATTAAGTCTTTGTCACTTTGTCATAGATT-GTATGTA  849
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AACCAAGCTATTTATTAAGTCTTTGTCACTTTGTCATAGATTGGTATGTA  850

seq1  ATGGAGACATCAGAAGCATCTAAGAATTGTGGAGGCCAGTCCTCTACAGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGACATCAGAAGCATCTAAGAATTGTGGAGGCCAGTCCTCTACAGA  900

seq1  GTAAAAATTGTCAGCACAAAAACTTGAACCTAACTTGTTTCTGTCTCAAC  949
      ||||||||||||||||| ||||||||||||||||||||||||||||| ||
seq2  GTAAAAATTGTCAGCAC-AAAACTTGAACCTAACTTGTTTCTGTCTC-AC  948

seq1  TCTTTAATGAGCAATTCTGAAGCCCTATGGAGTGATTAATTTACAACAAA  999
      ||||||||||||||||||| ||||||||||||||||| ||||||||||||
seq2  TCTTTAATGAGCAATTCTG-AGCCCTATGGAGTGATT-ATTTACAACAAA  996

seq1  AAAAAAATCAATGTATATGCAGATCAGAG  1028
      |||||||||||||||||||||||||||||
seq2  AAAAAAATCAATGTATATGCAGATCAGAG  1025