BAC Information

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BAC

Clone NameB6Ng01-333C09
Chromosome3 (Build37)
Map Location 94,135,355 - 94,135,407
singlet/doubletsinglet
Overlap geneThem4
Upstream geneHrnr, Rptn, EG383891, Tchh, Tchhl1, S100a11, S100a10, EG433623, Tdpoz2, Tdpoz1, LOC668325, LOC545550, EG436563, Tdpoz4, Tdpoz3, EG668341, LOC668344, EG668346, Tdpoz5, EG668353, EG668356, LOC668359, LOC100042761, LOC433624, LOC668367, LOC433625, LOC100043188, EG383977, EG245290, EG668385, EG212727
Downstream geneThem5, Gm659, Rorc, Lingo4, Tdrkh, Oaz3, Mrpl9, LOC668403, 2310007A19Rik, Tnrc4, Snx27, LOC100043228, EG668409, Tuft1, LOC100042793, BC021767, Selenbp2, LOC100042801, Cgn, Pogz, Psmb4, Selenbp1, Rfx5, Pik4cb, Zfp687, Psmd4, Pip5k1a, Vps72, Tmod4, Scnm1, Lysmd1, Tnfaip8l2, LOC668436, Sema6c, Gabpb2, Mllt11, Cdc42se1, Gm128, Bnipl, Prune, 4930504E06Rik, Anxa9, Lass2, Setdb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-333C09.bB6Ng01-333C09.g
ACCGA119044GA119045
length1,25053
definitionB6Ng01-333C09.b B6Ng01-333C09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtactgattagcattataaagtcagagcctacagctcagggct
attctgttagttgtttactaggacagaaaggacagtcttatccagaagaa
aagttaggaaatcccacggagaagattttttcctttagccctaagaattc
aggcagaactattgaacataaataaattttatgcctcaggccagcctttt
ctttctttttttttttttattaacagggaggagatgtaacctcccccacc
ccctcagcctgaaacctgcttgctcaggggtggagcttcccactcaattg
ttctaccacgcccactgctggagcctgctgttttcctgttccagagtcat
catgtgttcacctgcaaccttaccccaggattatttggcgggaattgggc
ccccttcccctcattcataactgcatgtcagaatagtaaaattgaacctt
gagcagagtcttgtcttggttccatctttatctcgtgccacctagtcccc
tcttctcttccaggtttctaagatgcctttccagactagaacccaaacat
gtgagctgctggctggacacaacaggcgggtaggggagcagggctggagg
gaggagggtaaaggggacttttgggatagcatttgaaatgtaaatgaaat
acctaataaaaatgaaaaaaaaaatcaacaaaggggacctcataaaattg
caaagcttctgtgaggcaaaagatactgtcgataagacaaaatggccacc
aacagattgggaaaggatttttaccaatcctaaatctgataggggactaa
catccaatatatacaaagagctcaaaaagctggactccagaaattcaaat
aaccccattaaaatatggggtacagagataaacaaagaattctcaactaa
gaataactaatggctgagaagcacctgaaaaaaatgttcaaatccttact
catcaggaaatgcaaatcaaacaaccctgagatctacctcacaccagtca
gagtgctagatcaaaattcagtggacagcatatgcttgcagatgtggaga
aagagaaaactcctcctgctgtggatgcagctaataaacactctgattaa
gtctgtgtcctcagaatgaacatagactatggaatccgcatcctccctgc
tatactgagagttccactgataagacatgtccatagtcataggccattta
atcgactgagacagtctcatgatgtatcgatatggacataccatggatac

aagcagggaaatacacaaaggcatttctaccctccctccctccctccctc
cct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_94135355_94135407
seq2: B6Ng01-333C09.g_73_125 (reverse)

seq1  AGGGAGGGAGGGAGGGAGGGAGGGTAGAAATGCCTTTGTGTATTTCCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGGAGGGAGGGAGGGAGGGTAGAAATGCCTTTGTGTATTTCCCTG  50

seq1  CTT  53
      |||
seq2  CTT  53