BAC Information

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BAC

Clone NameB6Ng01-333K15
Chromosome3 (Build37)
Map Location 93,374,321 - 93,374,931
singlet/doubletsinglet
Overlap genenone
Upstream geneIvl, Smcp, Lce1a1, Lce1b, LOC620325, Lce1a2, Lce1c, Lce1d, LOC100043062, Lce1e, Lce1f, LOC668264, Lce1g, Lce1h, Lce1i, LOC545547, LOC631101, Kprp, Lce1l, 2310050C09Rik, Lce3a, Lce3b, Lce3c, LOC630994, 2310001H18Rik, Lce3f, Crct1, Lce1m, EG229571, Crnn, EG229574, EG668300, LOC668304, Flg, LOC100042701, Hrnr, Rptn, EG383891, Tchh, Tchhl1, S100a11, S100a10
Downstream geneEG433623, Tdpoz2, Tdpoz1, LOC668325, LOC545550, EG436563, Tdpoz4, Tdpoz3, EG668341, LOC668344, EG668346, Tdpoz5, EG668353, EG668356, LOC668359, LOC100042761, LOC433624, LOC668367, LOC433625, LOC100043188, EG383977, EG245290, EG668385, EG212727, Them4, Them5, Gm659, Rorc, Lingo4, Tdrkh, Oaz3, Mrpl9, LOC668403, 2310007A19Rik, Tnrc4, Snx27
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-333K15.bB6Ng01-333K15.g
ACCGA119393GA119394
length1,0181,208
definitionB6Ng01-333K15.b B6Ng01-333K15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctattggtttattgaaatcacacttagagacagctgcagaataa
atgaaactatctagtttcaaatgttcacactgtaagtgggtagtgggtat
tgtcatacctttgcaatctctgaaattagcattgtgattacttggcaggg
ttatggtgaagatcaagtaagatgactcttaagcaattcaggcagactct
gattcatagtagtttgtcaataaatacatgtactctttttttaattaatt
tatcttttattagatattttctttatatacatttcaaatgctatcccgaa
agttccctataccctctctctgctctgctcccctacccacccactcccgc
ttcttggccctggtattcccctgtactggggcatataaagtttgcaatac
caagggtcctctcttcccagtgatggccgactaggccatcttccgctaca
tatgcagctagagatatgatctctgggggtactggttagttcatattgtt
gttccacctatagggttgcagaccccttcagctccttgggtgctttctct
agcttctccaacatccttaatcatcagggaaatgcaaatcaaaacaacct
tgagattccacctcacaccagtcaaaatggctaagatcaaaaattcaggt
gacagcagatgttgtcgaggttgtggagaaagatgaacactcctccactg
ctggtgggatagcaaactttttttttttttaaggcagggtctcatgtagc
agactttcatagaagtaaggttagccttggtccatatctgtaggtcagaa
tgactttgaactcctgctcctctatctcccccagtgttggaattatagca
tgtcccaaccagataagctccagctcttgttcatttgttcgttcgtttgt
ttgtttgttttggaaacaggaccccactagatactcagccgaccttgaac
tcatgggcatccttctgtcttagcctcccagattgtgaaattacaggaat
tataacttatgcctgaag
gaattcttcacagacatggaaagagtaattctcaatttattatggaaaaa
acaaataatccaggatagccaaaacaattctcagcaataaaagaggctct
gagggaatcaccactgattccctgatctcaagttgtattacagagcagta
ctgataaaaaaccaacagcaacaacaacaataaaaacaactgcatgatat
tggtctagagacagacaggtcgatcaatggaatagaattgaagacacaga
aataaatcccacacttatggacacttgatcttttacaaagaagccaaaaa
catacagtggaaaaaagaaagcatcttcagtaagtggtgctgatctacct
ggcagtctgtatgtataagaatgaaaatagatccatatttatcactttgc
acaaagctcaagttcaagtggaccaaggacctcaacataaaaccagatac
actaaatctaatacaagagaaaatgagaaagagcctcacactcattggca
cagggtgaactttcctgaacagaataccaatggcccaggctctaagattg
agaattgataaatgagactttatgaagccaaaaagcttctataagacaaa
agacatggacaataggacaaatcagcaaccatacatctgatagagggcta
atatccaaaatgtataaagaactcaagaagttaacctccaaaaaagaacc
cacaaataacccgataaaaatggggtacagagctaaacagaattcacaat
ggaaaaatctcaaatgactgagaaacacttaaaaaaatgatcaagctggg
cagtgcatgcctttaatcccagcacttgggaggcagaggcaggtagattt
ctgagttcaaggccagcctggtctacaaagtgagatccaggacagccagg
gctatacagagaaaccctgtctcgaaaaccaaatttatttattattaatt
aaaaatatgatcaagtccttagtcatcagaaaatgtaaatcaaacatcct
gagattctacacacaccatcagatgctaagataaaaaactcagtgataga
acatgctgcagatgtagaaaaagaggacactccttcaatggtggtggatg
caaactggtacattactctggaatcattggagttccttctgaaactggaa
tagtctactgagaacaccttgaaccatatccaaagagatgtcccacacaa
ttcccaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_93374321_93374931
seq2: B6Ng01-333K15.b_44_654 (reverse)

seq1  GTGGAATCTCAAGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAATCTCAAGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATG  50

seq1  TTGGAGAAGCTAGAGAAAGCACCCAAGGAGCTGAAGGGGTCTGCAACCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGAAGCTAGAGAAAGCACCCAAGGAGCTGAAGGGGTCTGCAACCCT  100

seq1  ATAGGTGGAACAACAATATGAACTAACCAGTACCCCCAGAGATCATATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTGGAACAACAATATGAACTAACCAGTACCCCCAGAGATCATATCT  150

seq1  CTAGCTGCATATGTAGCGGAAGATGGCCTAGTCGGCCATCACTGGGAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTGCATATGTAGCGGAAGATGGCCTAGTCGGCCATCACTGGGAAGA  200

seq1  GAGGACCCTTGGTATTGCAAACTTTATATGCCCCAGTACAGGGGAATACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACCCTTGGTATTGCAAACTTTATATGCCCCAGTACAGGGGAATACC  250

seq1  AGGGCCAAGAAGCGGGAGTGGGTGGGTAGGGGAGCAGAGCAGAGAGAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCAAGAAGCGGGAGTGGGTGGGTAGGGGAGCAGAGCAGAGAGAGGG  300

seq1  TATAGGGAACTTTCGGGATAGCATTTGAAATGTATATAAAGAAAATATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGGAACTTTCGGGATAGCATTTGAAATGTATATAAAGAAAATATCT  350

seq1  AATAAAAGATAAATTAATTAAAAAAAGAGTACATGTATTTATTGACAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAGATAAATTAATTAAAAAAAGAGTACATGTATTTATTGACAAAC  400

seq1  TACTATGAATCAGAGTCTGCCTGAATTGCTTAAGAGTCATCTTACTTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATGAATCAGAGTCTGCCTGAATTGCTTAAGAGTCATCTTACTTGAT  450

seq1  CTTCACCATAACCCTGCCAAGTAATCACAATGCTAATTTCAGAGATTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACCATAACCCTGCCAAGTAATCACAATGCTAATTTCAGAGATTGCA  500

seq1  AAGGTATGACAATACCCACTACCCACTTACAGTGTGAACATTTGAAACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTATGACAATACCCACTACCCACTTACAGTGTGAACATTTGAAACTA  550

seq1  GATAGTTTCATTTATTCTGCAGCTGTCTCTAAGTGTGATTTCAATAAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTTTCATTTATTCTGCAGCTGTCTCTAAGTGTGATTTCAATAAACC  600

seq1  AATAGGAATTC  611
      |||||||||||
seq2  AATAGGAATTC  611