BAC Information

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BAC

Clone NameB6Ng01-334B22
Chromosome3 (Build37)
Map Location 23,489,588 - 23,490,731
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040378, LOC623751, LOC100039548
Downstream geneEG635702, EG665189
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334B22.bB6Ng01-334B22.g
ACCGA119703GA119704
length1,1321,181
definitionB6Ng01-334B22.b B6Ng01-334B22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatgcaagtgcctaggctgaaggtcaggcctgctattttatcat
atcaattatggcagtcagtgagaggaaacactaaattttctataaaaatg
ttacagcttttttttttcctggcccacaatagcaaatgttctctgaatac
taaacgagtaaataaatccatttatggagaactgcacgaccccttgcttt
tatggatattgacatatgattgtataaaccctcaggaacctgaaaatctg
ctcaaattctgaaaaatataaaattaagaataaagactaatctgttccac
atgccagctcatctattctttactgatatagccaataaatcaggaagaat
agcttcctcatttttaaaaagtcagcatgattcccagtttgcaagaagta
agtgccagagaaatactggcagaggactctgtggggcgaagttagaacaa
atgcttggtttgtgataataaactttatttccatgtttaatttgcaagga
tttggaccttttgagtcactgagatgaatgtatagaactatgtattaaat
atgtattaaatgcagctgcttctcaacttacaatggtgttatggcttagc
aaacccatggtaagtggcaggtatcattgttagcaatgcactaaactgat
gtaatttaccaatggcatacccaagcagcacagggagtgccaggattttc
ctcattgatcacaagctggactgacctctgagacttgtactacctactta
ctcccctcacctacatctttgagaaaagtctgaaacatattgctcctttt
ccaataaaagatctgaactcaacatttaagtgtagtttatgccaaaagca
tatcattttctccttattgtactgctcaaaaatcacaagtcaaattttag
caggtttgactttcagcctaggcatatgcatggaattcttccattgactt
acagagaaagaggtcaaaaaatcagtatatttatcaccatattaatgcac
tggcatgtttatagccctgcacatgtttgatggcaaatgcagactttgtg
ataatgtctgctaaatgttgtacaaaaatattgtcatgagctagagtctc
tgtttggaatagtctgacgatcccttctctgc

gaattctcacctgaggaatatcgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatatccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggaggtacagagacaaagtttggagctgagataa
aaagatggaccatgtagagactgccatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattatgctgaaa
ggaccctgatatagctgtctcttgtcagagtatgcctgggcctagcaaac
atagaagtggatgctcacagtcggctattggatggattacatggccccca
acgaaggagctagagaaagtaccccagaagctaaagggatctgcaaccct
atagtggacacattatgaactaactagtacccctgagctcttgactctag
ctgcatatgttatcaaagatgctagcgtcatccactggaaagaagagcca
ttgaaccgcaacctttatattgcccagtacaggacgtcaggtcaaaagag
gggttgggataggggggaagttgtcactagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_23489588_23490731
seq2: B6Ng01-334B22.b_47_1178

seq1  GAATTCCATGCAAGTGCCTAGGCTGAAGGTCAGGCCTGCTATTTTATCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGCAAGTGCCTAGGCTGAAGGTCAGGCCTGCTATTTTATCAT  50

seq1  ATCAATTATGGCAGTCAGTGAGAGGAAACACTAAATTTTCTATAAAAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATTATGGCAGTCAGTGAGAGGAAACACTAAATTTTCTATAAAAATG  100

seq1  TTACAGCTTTTTTTTTTCCTGGCCCACAATAGCAAATGTTCTCTGAATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGCTTTTTTTTTTCCTGGCCCACAATAGCAAATGTTCTCTGAATAC  150

seq1  TAAACGAGTAAATAAATCCATTTATGGAGAACTGCACGACCCCTTGCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACGAGTAAATAAATCCATTTATGGAGAACTGCACGACCCCTTGCTTT  200

seq1  TATGGATATTGACATATGATTGTATAAACCCTCAGGAACCTGAAAATCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGATATTGACATATGATTGTATAAACCCTCAGGAACCTGAAAATCTG  250

seq1  CTCAAATTCTGAAAAATATAAAATTAAGAATAAAGACTAATCTGTTCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATTCTGAAAAATATAAAATTAAGAATAAAGACTAATCTGTTCCAC  300

seq1  ATGCCAGCTCATCTATTCTTTACTGATATAGCCAATAAATCAGGAAGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAGCTCATCTATTCTTTACTGATATAGCCAATAAATCAGGAAGAAT  350

seq1  AGCTTCCTCATTTTTAAAAAGTCAGCATGATTCCCAGTTTGCAAGAAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCCTCATTTTTAAAAAGTCAGCATGATTCCCAGTTTGCAAGAAGTA  400

seq1  AGTGCCAGAGAAATACTGGCAGAGGACTCTGTGGGGCGAAGTTAGAACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCAGAGAAATACTGGCAGAGGACTCTGTGGGGCGAAGTTAGAACAA  450

seq1  ATGCTTGGTTTGTGATAATAAACTTTATTTCCATGTTTAATTTGCAAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTGGTTTGTGATAATAAACTTTATTTCCATGTTTAATTTGCAAGGA  500

seq1  TTTGGACCTTTTGAGTCACTGAGATGAATGTATAGAACTATGTATTAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGACCTTTTGAGTCACTGAGATGAATGTATAGAACTATGTATTAAAT  550

seq1  ATGTATTAAATGCAGCTGCTTCTCAACTTACAATGGTGTTATGGCTTAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTAAATGCAGCTGCTTCTCAACTTACAATGGTGTTATGGCTTAGC  600

seq1  AAACCCATGGTAAGTGGCAGGTATCATTGTTAGCAATGCACTAAACTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCATGGTAAGTGGCAGGTATCATTGTTAGCAATGCACTAAACTGAT  650

seq1  GTAATTTACCAATGGCATACCCAAGCAGCACAGGGAGTGCCAGGATTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTTACCAATGGCATACCCAAGCAGCACAGGGAGTGCCAGGATTTTC  700

seq1  CTCATTGATCACAAGCTGGACTGACCTCTGAGACTTGTACTACCTACTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTGATCACAAGCTGGACTGACCTCTGAGACTTGTACTACCTACTTA  750

seq1  CTCCCCTCACCTACATCTTTGAGAAAAGTCTGAAACATATTGCTCCTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTCACCTACATCTTTGAGAAAAGTCTGAAACATATTGCTCCTTTT  800

seq1  CCAATAAAAGATCTGAACTCAACATTTAAGTGTAGTTTATGCCAAAAGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAAAAGATCTGAACTCAACATTTAAGTGTAGTTTATGCCAAAAGCA  850

seq1  TATCATTTTCTCCTTATTGTACTGCTCAAAAATCACAAGTCAAATTTTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATTTTCTCCTTATTGTACTGCTCAAAAATCACAAGTCAAATTTTAG  900

seq1  CAGGTTTGACTTTCAGCCTAGGCATATGCATGGAATTCTTCCATTGACTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTTGACTTTCAGCCTAGGCATATGCATGGAATTCTTCCATTGACTT  950

seq1  ACAGAGAAAGAGGTCAAAAAATCAGTATATTTATCACCATATTAATGCAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAAAGAGGTCAAAAAATCAGTATATTTATCACCATATTAATGCAC  1000

seq1  TGGCATGTTTATAGCCCTGCACATGTTTGAATGGCAAAATGCAAGACTTT  1050
      ||||||||||||||||||||||||||||| ||||| |||||| |||||||
seq2  TGGCATGTTTATAGCCCTGCACATGTTTG-ATGGC-AAATGC-AGACTTT  1047

seq1  GTGATTAATTGTCTGCTTAAATTGTTTGTAC-AAAATATTGTCATTGAAG  1099
      |||||  | ||||||| |||||   |||||| |||||||||||||   ||
seq2  GTGAT--AATGTCTGC-TAAAT--GTTGTACAAAAATATTGTCAT--GAG  1090

seq1  CTAGAGTCCTCTGTTTTGGATAGTCCTGACGGTTCCCTTCTCTGC  1144
      ||||||| |||||||| | ||||| ||||| | ||||||||||||
seq2  CTAGAGT-CTCTGTTTGGAATAGT-CTGAC-GATCCCTTCTCTGC  1132


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