BAC Information

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BAC

Clone NameB6Ng01-335D22
Chromosome3 (Build37)
Map Location 151,257,176 - 151,258,020
singlet/doubletsinglet
Overlap genenone
Upstream geneEltd1
Downstream geneIfi44, H28, Ptgfr, LOC100040741, LOC100040597, LOC676548, Gipc2, Dnajb4, Fubp1, Nexn, C030011O14Rik, Usp33, Zzz3, Ak5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-335D22.bB6Ng01-335D22.g
ACCGA120536GA120537
length1,1871,199
definitionB6Ng01-335D22.b B6Ng01-335D22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggccaatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaacagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagccacaaataatataaaatatctcggcg
tgactctaacgaaggaagtgaaagatctgtatgataaaaacttcaagtcc
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggaccaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccattaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
gaggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtgataaaaactgca
tggtactggtatagagacagacaagtggaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
cccaaaccatccagtggaagaaagacagcattttcaacaattggtgctgg
cacaactgggttgttatcatgtagaagaatgcgaattgatccatacttat
ctcttgtactaaggtcaaatctagtggatcaggaacttcacataaaaacc
agagaacactgaaactatagaggagaaagtgggaaagcttgagatatggg
cacagggtaaaagtctgaacagaacaagcaatgctggctgtagatcgata
ttgaccaattggaaccctatatggaacctctccagga
gaattctgtggcttgtgtcagaggccacaatgggacaagctaagaactag
caggtgatcttcctgagatggtctgcttcagattattatataatctgtga
caggtttgctcttattcagcaagtctgtaagggaattcatcttaggaaat
attcctgctattaatatgcttttcctgttattattaaacgtatataacaa
tcactaggtagtagcacacccctttggagcagatctctgcagatccatga
agatgtactgacttgtagtgatgctatatagacaaagagaggatgtctta
agtcttaatgatgatcctataagaattcctaaaattatatcagtgattat
taagctcttttatagtgggactgctattaggtccttttgtgatagtcaaa
actgcaaatgagaactctgccagtctcccaagtatcaccagttaattgct
cgtagatagtaataagactttctcctactcagagcacattccaagaggtt
gtaaaacaattaaccaaaggtcataaaaagggaactaatgatttattata
gatgctaggacagaatataaaatattgactgggtttatttatacaaaact
tcactaataacttagttatggttttaaaccttcagcgaacctgtggagct
gagacaggtgatggatgtttagccagataatcactcctaatggatatgca
tgtaaacattcgctgttgtaaacttctctttcaatttatgatttgatttt
tgtgtgtgaacttgtgatgaactttgtaacatgtgatcatgtattctgaa
agatgtgtaagtgtggaggacaaagagatgagaagcagagagagaagaat
ttttcccttactagaattttttccctttcccacttaagatctttccactt
ttccccttagataggtttaatagaaaactttttacaactaacttagtaat
aaatgctatgatcacttttctaagtgtccctctttcttcctgggacttca
aactagcatgctgaaagttagagccaagcagttcctgctgagatagtaca
aaggctatttacttaatccctttgctgtttgagagatggctaactgccag
aaactgcagttctggcctcagaggatcaccagaaggcaggtcagctgtag
taacaaagggtaaccttaagactctgagaataagattaaaactttttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_151257176_151258020
seq2: B6Ng01-335D22.g_410_1262

seq1  TTATTAAGCTCTTTTATAGTGGGACTGCTATTAGGTCCTTTTGTGATAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAAGCTCTTTTATAGTGGGACTGCTATTAGGTCCTTTTGTGATAGT  50

seq1  CAAAACTGCAAATGAGAACTCTGCCAGTCTCCCAAGTATCACCAGTTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTGCAAATGAGAACTCTGCCAGTCTCCCAAGTATCACCAGTTAAT  100

seq1  TGCTCGTAGATAGTAATAAGACTTTCTCCTACTCAGAGCACATTCCAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCGTAGATAGTAATAAGACTTTCTCCTACTCAGAGCACATTCCAAGA  150

seq1  GGTTGTAAAACAATTAACCAAAGGTCATAAAAAGGGAACTAATGATTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTAAAACAATTAACCAAAGGTCATAAAAAGGGAACTAATGATTTAT  200

seq1  TATAGATGCTAGGACAGAATATAAAATATTGACTGGGTTTATTTATACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGATGCTAGGACAGAATATAAAATATTGACTGGGTTTATTTATACAA  250

seq1  AACTTCACTAATAACTTAGTTATGGTTTTAAACCTTCAGCGAACCTGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCACTAATAACTTAGTTATGGTTTTAAACCTTCAGCGAACCTGTGG  300

seq1  AGCTGAGACAGGTGATGGATGTTTAGCCAGATAATCACTCCTAATGGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGACAGGTGATGGATGTTTAGCCAGATAATCACTCCTAATGGATA  350

seq1  TGCATGTAAACATTCGCTGTTGTAAACTTCTCTTTCAATTTATGATTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTAAACATTCGCTGTTGTAAACTTCTCTTTCAATTTATGATTTGA  400

seq1  TTTTTGTGTGTGAACTTGTGATGAACTTTGTAACATGTGATCATGTATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTGTGTGAACTTGTGATGAACTTTGTAACATGTGATCATGTATTC  450

seq1  TGAAAGATGTGTAAGTGTGGAGGACAAAGAGATGAGAAGCAGAGAGAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGATGTGTAAGTGTGGAGGACAAAGAGATGAGAAGCAGAGAGAGAA  500

seq1  GAATTTTTCCCTTACTAGAATTTTTTCCCTTTCCCACTTAAGATCTTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTTCCCTTACTAGAATTTTTTCCCTTTCCCACTTAAGATCTTTCC  550

seq1  ACTTTTCCCCTTAGATAGGTTTAATAGAAAACTTTTTACAACTAACTTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTCCCCTTAGATAGGTTTAATAGAAAACTTTTTACAACTAACTTAG  600

seq1  TAATAAATGCTATGATCACTTTTCTAAGTGTCCCTCTTTCTTCCTGGGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAATGCTATGATCACTTTTCTAAGTGTCCCTCTTTCTTCCTGGGAC  650

seq1  TTCAAACTAGCATGCTGAAAGTTAGAGCCAAGCAGTTCCTGCTGAGATAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACTAGCATGCTGAAAGTTAGAGCCAAGCAGTTCCTGCTGAGATAG  700

seq1  TACAAAGGCTATTTACTTAAT-CCTTTGCTGTTTGAGGAAGATGGGCTAA  749
      ||||||||||||||||||||| |||||||||||||||  |||| ||||||
seq2  TACAAAGGCTATTTACTTAATCCCTTTGCTGTTTGAG--AGAT-GGCTAA  747

seq1  CTGCCAGAAACTGCAGTTTCTGGCCTCAGAGGATCA-CAGAAGGCAGGTC  798
      |||||||||||||||| ||||||||||||||||||| |||||||||||||
seq2  CTGCCAGAAACTGCAG-TTCTGGCCTCAGAGGATCACCAGAAGGCAGGTC  796

seq1  AGCTGTAGTAACAA--GGTAAC--TTAGACTCAG---ATAAG---TAAAC  838
      ||||||||||||||  ||||||  | |||||| |   |||||    ||||
seq2  AGCTGTAGTAACAAAGGGTAACCTTAAGACTCTGAGAATAAGATTAAAAC  846

seq1  TTTTTAT  845
      |||||||
seq2  TTTTTAT  853