BAC Information

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BAC

Clone NameB6Ng01-336D07
Chromosome3 (Build37)
Map Location 77,491,769 - 77,492,800
singlet/doubletsinglet
Overlap genenone
Upstream geneFstl5, LOC100041625, LOC100041635, Dnmt3a-ps1
Downstream geneEG626461, LOC667526, LOC626479, LOC100041691
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-336D07.bB6Ng01-336D07.g
ACCGA121199GA121200
length1,2481,031
definitionB6Ng01-336D07.b B6Ng01-336D07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatactgaatggctgagaagcacctaaagaaatg
ttcaacatttttagtcatcagggaaatgcaaatcaaagcaaccctgagat
tccttctcacaacagtcaaaatgtctaagatcaaaaattcacgtgaaagc
agatattggtgaggacgtggaaaaagaggaaaactcctccattgctggtc
gaattgcaagctggtacaaccttcttggaaatcaatctgttggttcctca
gaaaattggacagagtactacgtgagagcccagcaataacactcttgggc
acatacccagaagactatcccacatgtagtaaggacacatgttccactat
gttcatagtagccttatttatactagctagaagctggaatgtcctggctg
tccatcaacagagtaatggatacagaaaatgtggtacatttacacaatga
aatactactcaactttaaaaacagcgaatttatgaaattcttagggaaat
ggatggaactagatactatcatcgtgagtacggtaacccaatcagaaaag
aacacacatgatatgcactgactgataagtggatatcaacccagaagctt
ggaaaacccaagatgcaattcacataccacatgaagctcaggatgaagga
agaccaaagtgtggatacttcagtccttcttagaagtgggaacaaaataa
ccttgggaggagatacagagacaaagtgtggagcagagcctgaagaaaag
gccatccagatgccctacctagttatacttcccacatactatcacccaaa
ccggacactcttgttgatgctaacaagtactagttggcaggagcctgata
tagctgtctcctgagaggctctgtcagtgcctgacaaatacagaagtaga
tgctctgagccatacattgaactgagcacgggtctgcaatggcggagcta
gagaaaggacccaaaggaactgaaggggtttgcagccgcataggaggagc
aatatcaacaaaccattactgccagagctcccgggactaaactacaacca
aagagtacacttgtagggacccatgactcagcacaatatgttagctgaga
atataagccttgtagtcatccatgggagaagaaggctcttgttcccatga
tgctagaattgcccaagtgtaggaatgccagacctagcagctggagttgg
gtggattggtgacctagcctgaaggcatatgagcaatagagagaatct

gaattcaagggcaggaggtgggagtgtgtgagtgggtggaggaacaccct
catagaagcagggggagtggggatgtaatttgaatatcatttgtaatgta
aataaagaaaatatccaataaaaaaccaacaaaatatactgcacacaatt
gtatgtgtctgctgcatgtgcatggacacagatgtgtacatgtgttttcc
tatatctacaattatatgcctacatgcacatgaagttagagattgttctt
ggtagttattcttcaggaaacatactcattgtttttgagaaagggtctct
cactaggatttgagcttacccattgagttaggttggctagccagagaatc
ctaagaattaccctgtgagtttctctccacggctggtattacaaatgtct
aacacccagttctgcatcacagggatgctgatgtctgagcatagagcttt
gcatattcacaagatctttaccaactgaacaactgagctatcttctcagg
cttcacaatgaaaaggagaaaaaaatttacatctattaaataatctctag
aatataattactgaggtatacatcggacagtatatttgttgtttgaatgc
atttccacaaatgtattgacagctgccaatttaaaaaatttaaacaattt
aattatactgcgtaacaaaagatggagttgttcaaaaagctgatctcatg
taaagctgaaagtaaaaaagaatggaggactgagatattgaattacataa
gaataggaagccatgatgtgcacttacattctgtgctgtacactgtatga
taaaaaattagaagagatttgttgatgtataatacatgtaagaagtgata
catttctaaacatatttcaaatagtgcacagtgtaaaaactgaaatttta
catattgtccattaatattgatgattttcatatgtatgcagcttgtaaac
ataattacaaagtacatctaaagttccatcaaggatgtatgcctctgaat
gagagctctattctacactgctcatgaattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_77491769_77492800
seq2: B6Ng01-336D07.g_63_1093

seq1  GAATTCAAGGGCAGGAGGTGGGAGTGTGTGAGTGGGTGGAGGAACACCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGGCAGGAGGTGGGAGTGTGTGAGTGGGTGGAGGAACACCCT  50

seq1  CATAGAAGCAGGGGGAGTGGGGATGTAATTTGAATATCATTTGTAATGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAAGCAGGGGGAGTGGGGATGTAATTTGAATATCATTTGTAATGTA  100

seq1  AATAAAGAAAATATCCAATAAAAAACCAACAAAATATACTGCACACAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGAAAATATCCAATAAAAAACCAACAAAATATACTGCACACAATT  150

seq1  GTATGTGTCTGCTGCATGTGCATGGACACAGATGTGTACATGTGTTTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTGTCTGCTGCATGTGCATGGACACAGATGTGTACATGTGTTTTCC  200

seq1  TATATCTACAATTATATGCCTACATGCACATGAAGTTAGAGATTGTTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTACAATTATATGCCTACATGCACATGAAGTTAGAGATTGTTCTT  250

seq1  GGTAGTTATTCTTCAGGAAACATACTCATTGTTTTTGAGAAAGGGTCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTTATTCTTCAGGAAACATACTCATTGTTTTTGAGAAAGGGTCTCT  300

seq1  CACTAGGATTTGAGCTTACCCATTGAGTTAGGTTGGCTAGCCAGAGAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGGATTTGAGCTTACCCATTGAGTTAGGTTGGCTAGCCAGAGAATC  350

seq1  CTAAGAATTACCCTGTGAGTTTCTCTCCACGGCTGGTATTACAAATGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAATTACCCTGTGAGTTTCTCTCCACGGCTGGTATTACAAATGTCT  400

seq1  AACACCCAGTTCTGCATCACAGGGATGCTGATGTCTGAGCATAGAGCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCCAGTTCTGCATCACAGGGATGCTGATGTCTGAGCATAGAGCTTT  450

seq1  GCATATTCACAAGATCTTTACCAACTGAACAACTGAGCTATCTTCTCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATTCACAAGATCTTTACCAACTGAACAACTGAGCTATCTTCTCAGG  500

seq1  CTTCACAATGAAAAGGAGAAAAAAATTTACATCTATTAAATAATCTCTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACAATGAAAAGGAGAAAAAAATTTACATCTATTAAATAATCTCTAG  550

seq1  AATATAATTACTGAGGTATACATCGGACAGTATATTTGTTGTTTGAATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAATTACTGAGGTATACATCGGACAGTATATTTGTTGTTTGAATGC  600

seq1  ATTTCCACAAATGTATTGACAGCTGCCAATTTAAAAAATTTAAACAATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCACAAATGTATTGACAGCTGCCAATTTAAAAAATTTAAACAATTT  650

seq1  AATTATACTGCGTAACAAAAGATGGAGTTGTTCAAAAAGCTGATCTCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATACTGCGTAACAAAAGATGGAGTTGTTCAAAAAGCTGATCTCATG  700

seq1  TAAAGCTGAAAGTAAAAAAGAATGGAGGACTGAGATATTGAATTACATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCTGAAAGTAAAAAAGAATGGAGGACTGAGATATTGAATTACATAA  750

seq1  GAATAGGAAGCCATGATGTGCACTTACATTCTGTGCTGTACACTGTATGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGGAAGCCATGATGTGCACTTACATTCTGTGCTGTACACTGTATGA  800

seq1  TAAAAAATTAGAAGAGATTTGTTGATGTATAATACATGTAAGAAGTGATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATTAGAAGAGATTTGTTGATGTATAATACATGTAAGAAGTGATA  850

seq1  CA-TTCTAAACATATTTCAAATAGTGCACAGTGTAAAAACTGAAATTTTA  899
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTAAACATATTTCAAATAGTGCACAGTGTAAAAACTGAAATTTTA  900

seq1  CATATTGTCCATTAATATTGATGATTTTCATATGTATGCAGCTTGTAAAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTGTCCATTAATATTGATGATTTTCATATGTATGCAGCTTGTAAAC  950

seq1  ATAATTACAAAAGTACATCTAAAGTTCCATCAAGGATGTTATGCCTCTGA  999
      |||||||| ||||||||||||||||||||||||||||| |||||||||||
seq2  ATAATTAC-AAAGTACATCTAAAGTTCCATCAAGGATG-TATGCCTCTGA  998

seq1  ATGAGAGCTCTATTCTACACTGCTCATGAATTT  1032
      |||||||||||||||||||||||||||||||||
seq2  ATGAGAGCTCTATTCTACACTGCTCATGAATTT  1031


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