BAC Information

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BAC

Clone NameB6Ng01-336L17
Chromosome3 (Build37)
Map Location 5,418,238 - 5,419,363
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC620283, Zfhx4
Downstream genePxmp3, EG620382, EG667759, LOC100041165, LOC100041193, EG620570, LOC100041214
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-336L17.bB6Ng01-336L17.g
ACCGA121567GA121568
length1,2251,104
definitionB6Ng01-336L17.b B6Ng01-336L17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctattgcacccagaaacaccaaaaccagtcagtagacttccatgg
agaacatcttaacacaggacaacagtctgctgctcctctaaagacactag
agtctgaaggcctcccaggagatctccagcagccagggccactgattagc
agcttctctggcctctgaagggcccccagttggaaagtcccaaatgtgat
cagccacagatagggccacaggcctatcaggaaacctgagacaacccagg
gacaaaagaggcagagtcactcagaccagcaaaaaccagggaaaaccaga
tggtgagagacaagtgtaaaaccttaagctccattacacaaacacatctg
aaaatcaggaaactgacctaaaatcttatctaatggatataataaagttc
tttaaggagtatatacataactcactgaaagaaatgcaggataacacaat
caataggtaaaagaattgaataaagcactcgaaaacctaaaagtagaagt
agaaaaaatatatagaaaacaaaactggaggcaaacctggaaatggaaaa
cctaggagaaaggccaggaattacagatgtaagtatcatcaacagaatac
aagagctagaacagagaatttcaggtgtagaagataccatagaagagatt
aacacaaaagtctaagaaaaaagcaaaatgcaaaaagcttctaacccaaa
gcatccagaaaattcaagacacaatgaaaagaccaaatctgagaataatc
agaatagagtagaacaaagattcccagctcaaaagccctaaaaaggtctt
caacaaaatcacagaagaaaacttccccaacctaaacaaagagatggctt
aaaggtacaagaagcctatagaacaccaaataaatgggatcagaaaagaa
aatcctctcatcatgtaataattaaaacactaaatgaacagaacaaagaa
aggatattaaaagctgcaacggagaaaggtcaagtgacatacaaaggtag
agctatcagattacaccagacttctcaacagaaactatgaaagaacagag
agcctgtcaagggtcatgcagactctaagaaaaacaaaaaatgcctagtc
agctactataccccagtaaatatttttttatcacatgattgaggaaacca
aaatattccaggacaaccctagttcacaatatctaacaatcacagtcgta
taaagaaatcctgggagaggtacac
gaattcctcttttgtttgaaataaggaaagttagtggaagtcaagactac
ataattcccaggactccagaaagaaaaaaaaaaaacataaacatttcaag
acagttataaaagaacatagaacttcttgtggactccccccaaaagccac
aaagaagtcctggccacacccatgaaaataacccaacagtcaatcttaca
ctttttcttccattcccatggtcatgtctaaaataaaaactggcttccat
attacatgccatagggagaagactgattattgtctatataccgttttcat
tgtgccttagtctgttttctcttgtgattaaataataccaaggagcaact
ttggaaggaaaggactagtttcagtttgcctgctacagggaagcaaaggc
aggaacctaaagatatgaactgaagcaagagcatggtgaatgaactgaag
caattccacatggtggaaggctgcttactggctggttatccatgacttct
ttatcctgcttctttatataatctaagatgacctgccgagcagtgacacc
actcatatgggttgggtcatccctcatcaatcatcagtcaagaaagtact
ttgccaatctaatctgattgagacaatttctcaattgagtttctcattga
gtgactctagtttgtgtcacaatgacaaaaaaaaaaaaaaaaaaattaac
aagccctgtggtatctgttaaaaaaagctagtttctctaacctttcatca
ctgacccaaacaagttatctttctgggctgttaggctattgtaccttgtt
ataatgatgctcctggggacaaggaaagaatttaaaactacatcaggctt
gccctcaatctctcacctctacctaggagtatgcttcccttagacatggg
tttcaaaagaaatatagggctctgtgaaaatctatagcctatatgtacac
agtttccttttggctgctcccacctccctttgctgtgcatcttgactcgt
ctagagattacatgagtcagattttcgtgtcagacatatgccataaaaca
tagctagctattcttagttttctctgagagactatcagcatagcatagta
aaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_5418238_5419363
seq2: B6Ng01-336L17.g_68_1171

seq1  GAATTCCTCTTTTGTTTGAAATAAGGAAAGTTAGTGGAAGTCAAGACTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTTTTGTTTGAAATAAGGAAAGTTAGTGGAAGTCAAGACTAC  50

seq1  ATAATTCCCAGGACTCCAGAAAGAAAAAAAAAAAACATAAACATTTCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTCCCAGGACTCCAGAAAGAAAAAAAAAAAACATAAACATTTCAAG  100

seq1  ACAGTTATAAAAGAACATAGAACTTCTTGTGGACTCCCCCCAAAAGCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTATAAAAGAACATAGAACTTCTTGTGGACTCCCCCCAAAAGCCAC  150

seq1  AAAGAAGTCCTGGCCACACCCATGAAAATAACCCAACAGTCAATCTTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGTCCTGGCCACACCCATGAAAATAACCCAACAGTCAATCTTACA  200

seq1  CTTTTTCTTCCATTCCCATGGTCATGTCTAAAATAAAAACTGGCTTCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCTTCCATTCCCATGGTCATGTCTAAAATAAAAACTGGCTTCCAT  250

seq1  ATTACATGCCATAGGGAGAAGACTGATTATTGTCTATATACCGTTTTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATGCCATAGGGAGAAGACTGATTATTGTCTATATACCGTTTTCAT  300

seq1  TGTGCCTTAGTCTGTTTTCTCTTGTGATTAAATAATACCAAGGAGCAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCTTAGTCTGTTTTCTCTTGTGATTAAATAATACCAAGGAGCAACT  350

seq1  TTGGAAGGAAAGGACTAGTTTCAGTTTGCCTGCTACAGGGAAGCAAAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGGAAAGGACTAGTTTCAGTTTGCCTGCTACAGGGAAGCAAAGGC  400

seq1  AGGAACCTAAAGATATGAACTGAAGCAAGAGCATGGTGAATGAACTGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACCTAAAGATATGAACTGAAGCAAGAGCATGGTGAATGAACTGAAG  450

seq1  CAATTCCACATGGTGGAAGGCTGCTTACTGGCTGGTTATCCATGACTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCCACATGGTGGAAGGCTGCTTACTGGCTGGTTATCCATGACTTCT  500

seq1  TTATCCTGCTTCTTTATATAATCTAAGATGACCTGCCGAGCAGTGACACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCTGCTTCTTTATATAATCTAAGATGACCTGCCGAGCAGTGACACC  550

seq1  ACTCATATGGGTTGGGTCATCCCTCATCAATCATCAGTCAAGAAAGTACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATATGGGTTGGGTCATCCCTCATCAATCATCAGTCAAGAAAGTACT  600

seq1  TTGCCAATCTAATCTGATTGAGACAATTTCTCAATTGAGTTTCTCATTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAATCTAATCTGATTGAGACAATTTCTCAATTGAGTTTCTCATTGA  650

seq1  GTGACTCTAGTTTGTGTCACAATGACAAAAAAAAAAAAAAAAAAATTAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTCTAGTTTGTGTCACAATGACAAAAAAAAAAAAAAAAAAATTAAC  700

seq1  AAGCCCTGTGGTATCTGTTAAAAAAAGCTAGTTTCTCTAACCTTTCATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCTGTGGTATCTGTTAAAAAAAGCTAGTTTCTCTAACCTTTCATCA  750

seq1  CTGACCCAAACAAGTTATCTTTCTGGGCTGTTAGGCTATTGTACCTTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCCAAACAAGTTATCTTTCTGGGCTGTTAGGCTATTGTACCTTGTT  800

seq1  ATAATGATGCTCCTGGGGACAAGGAAAGAATTTAAAACTACATCAGGCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGATGCTCCTGGGGACAAGGAAAGAATTTAAAACTACATCAGGCTT  850

seq1  GCCCTCAATCTCTCACCTCTACCTAGGAGTATGCTTCCCTTAGACATGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCAATCTCTCACCTCTACCTAGGAGTATGCTTCCCTTAGACATGGG  900

seq1  TTTCAAAAGAAATATAGGGCTCTGTGAAAATCTATAGCCTATATGTACAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAAGAAATATAGGGCTCTGTGAAAATCTATAGCCTATATGTACAC  950

seq1  AGTTTCCTTTTGGCTGCTCCCCACTCCCTTTGCTGTGCATCTTTGACTCG  1000
      |||||||||||||||||||||  |||||||||||||||||| ||||||||
seq2  AGTTTCCTTTTGGCTGCTCCCACCTCCCTTTGCTGTGCATC-TTGACTCG  999

seq1  TCTAGAAGATTAACATGAGGTCAAGATTTTCGGTGTCCAGACAATTATGC  1050
      ||||| ||||| |||||| ||| |||||||| |||| ||||||  |||||
seq2  TCTAG-AGATT-ACATGA-GTC-AGATTTTC-GTGT-CAGACA--TATGC  1041

seq1  CATAAAAACCATTAAGCTAGCCTATTCTTAGTTTTCTCTGAAAGAAGGAC  1100
      |||||||  |||  |||||| |||||||||||||||||||| |    |||
seq2  CATAAAA--CAT--AGCTAG-CTATTCTTAGTTTTCTCTGAGA----GAC  1082

seq1  TATCCAGCAATAGCATTAGGTAAAAA  1126
      ||| |||| |||||||   |||||||
seq2  TAT-CAGC-ATAGCAT--AGTAAAAA  1104