BAC Information

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BAC

Clone NameB6Ng01-337A11
Chromosome3 (Build37)
Map Location 74,775,264 - 74,882,403
singlet/doubletdoublet
Overlap geneBC050789
Upstream geneLOC619764, LOC667434, LOC100041551, EG667459
Downstream geneSerpini2, Wdr49, Pdcd10, Serpini1, Golph4, Fstl5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337A11.bB6Ng01-337A11.g
ACCGA121778GA121779
length1,1351,069
definitionB6Ng01-337A11.b B6Ng01-337A11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,775,264 - 74,776,399)(74,881,353 - 74,882,403)
sequence
gaattctactaaatccatcaaaacattaaccttcaccaccattttgtttc
atgacatataattccagtttagcttgataggacatcccagcagtttgtgg
cgctgatttggaagggttggtaattctaagacagcctagattgcacagtg
agaacctatatcctgtcacaataaaaagaagcagaatcaaatgcagggag
atgggaaggtgtagaaaagaataaaatgagcacacatttgttcatagaaa
gctagtgaactcacctcactttaccgtttatagtcttttagctcctattc
ttgttttgacacatgaagctgggctttcacttagacatgtgtgctgatgc
ttacttatagggatgacgcctgaaactttcctctgatctaatgaaacaaa
agtatgttgggttataacgtggaatggtagatgtgaattttcaagggcaa
gacatgttaatagcccgatgcaattaatttatacatggctgcagtaagtc
agcattctggcactgattcagaatttcttcatccttctctgaagataaaa
tgtccccacggaggattaaacactcttgttcatagaaaacaaagagaaag
gagggtcaaatttatctttttgagagacttgacagaatctaaatcttaat
tatgtgataccaatgacatttttgtagtcttatatgttaccagatgagct
tcatatcccatagggcaaagcaaacagtcctttgccaatcccctcccctc
tctgtctgtatgcatgtatgctcttgtatatttcaagcatcttgatctgt
ctgtgtatgcattaacgtttcttgttattttgtaatatttctattttagc
tattctatataatacagaacatgattattagaatgtggatattattcata
tggaaattctataacccatttaaacaatgagtaccattactaagaaaaaa
agtgtcccttttcctgaaatccaaataaaaactctatttggctttgaaaa
aaaaagagttagagggagctttcactgacatcagttactgagtggactga
aacaataatgttagtcagggttctcttaggatacctgactagaatactga
taggacttggaactatattattctttcaatctcta

gaattcatctcaagacaccaacacatcattgaaatgcagcaatcaaaatg
agaggtcaaacttgggaaattcaaaaactgcaaaggaaccactggtaaat
acctattatatttactgcattaatagtttataaggatattcttgagaaaa
tgatgttatagcataatacatactaaaaggttattttctacttagattaa
agtactgccgcttaaggtgatagctaaagaatgactcatatcgaaacagg
catttcttataagataaatgtcattttaacatgcatttttctgtgacaaa
tgatactagagaaacacctcattgatatatcaagaataatggtgcttttg
caaataaatttacaattgcagaatagagtgtcattctgatatatatatat
atattatatataaaatgtttgtgtgtgtggtgtgtgtgtgtgcgtgcgtg
tgttatgtacaaacacatatgcatgcataaacacacatatatgtacatca
atacatttattattgaaagtgatatatttttaggtgcagagaaaatgacc
acttcttgcaatgtaggtaaagcaagtcatgattttaggaatatgcctaa
ggaggaaatagtgcaacaaacaaagaagctcattcttgtactcatgccaa
attttaaaatgtttttgaaccatcatcctacataatagacgtcttatgta
gttatgattattaataataaaattcttggtaattgaataaaccacccatt
ttccagtacttgaaatttaattttaaagtcattttatgcagcctaaactg
aatcaagaacccaaaacatgtgggagaatgaaatgactgcatgatcattt
ggttttgtgcagactgttgttgttgttgttgtttgtttgtttgtttttgt
actgtctatcaataatgtagtgttttttgaatatgaaactggaactgaaa
acttctttcaaaatcccagaaaccttaaaacatcctgctcaaaatatttg
gagggaattggatcttgtaactaagaagaaaatatcctcatgtacagcca
agaatgatagaaatactga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_74775264_74776399
seq2: B6Ng01-337A11.b_42_1176

seq1  GAATTCTACTAAATCCATCAAAACATTAACCTTCACCACCATTTTGTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTAAATCCATCAAAACATTAACCTTCACCACCATTTTGTTTC  50

seq1  ATGACATATAATTCCAGTTTAGCTTGATAGGACATCCCAGCAGTTTGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATATAATTCCAGTTTAGCTTGATAGGACATCCCAGCAGTTTGTGG  100

seq1  CGCTGATTTGGAAGGGTTGGTAATTCTAAGACAGCCTAGATTGCACAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGATTTGGAAGGGTTGGTAATTCTAAGACAGCCTAGATTGCACAGTG  150

seq1  AGAACCTATATCCTGTCACAATAAAAAGAAGCAGAATCAAATGCAGGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCTATATCCTGTCACAATAAAAAGAAGCAGAATCAAATGCAGGGAG  200

seq1  ATGGGAAGGTGTAGAAAAGAATAAAATGAGCACACATTTGTTCATAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAAGGTGTAGAAAAGAATAAAATGAGCACACATTTGTTCATAGAAA  250

seq1  GCTAGTGAACTCACCTCACTTTACCGTTTATAGTCTTTTAGCTCCTATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTGAACTCACCTCACTTTACCGTTTATAGTCTTTTAGCTCCTATTC  300

seq1  TTGTTTTGACACATGAAGCTGGGCTTTCACTTAGACATGTGTGCTGATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGACACATGAAGCTGGGCTTTCACTTAGACATGTGTGCTGATGC  350

seq1  TTACTTATAGGGATGACGCCTGAAACTTTCCTCTGATCTAATGAAACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTATAGGGATGACGCCTGAAACTTTCCTCTGATCTAATGAAACAAA  400

seq1  AGTATGTTGGGTTATAACGTGGAATGGTAGATGTGAATTTTCAAGGGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGTTGGGTTATAACGTGGAATGGTAGATGTGAATTTTCAAGGGCAA  450

seq1  GACATGTTAATAGCCCGATGCAATTAATTTATACATGGCTGCAGTAAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGTTAATAGCCCGATGCAATTAATTTATACATGGCTGCAGTAAGTC  500

seq1  AGCATTCTGGCACTGATTCAGAATTTCTTCATCCTTCTCTGAAGATAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCTGGCACTGATTCAGAATTTCTTCATCCTTCTCTGAAGATAAAA  550

seq1  TGTCCCCACGGAGGATTAAACACTCTTGTTCATAGAAAACAAAGAGAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCCACGGAGGATTAAACACTCTTGTTCATAGAAAACAAAGAGAAAG  600

seq1  GAGGGTCAAATTTATCTTTTTGAGAGACTTGACAGAATCTAAATCTTAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTCAAATTTATCTTTTTGAGAGACTTGACAGAATCTAAATCTTAAT  650

seq1  TATGTGATACCAATGACATTTTTGTAGTCTTATATGTTACCAGATGAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGATACCAATGACATTTTTGTAGTCTTATATGTTACCAGATGAGCT  700

seq1  TCATATCCCATAGGGCAAAGCAAACAGTCCTTTGCCAATCCCCTCCCCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATCCCATAGGGCAAAGCAAACAGTCCTTTGCCAATCCCCTCCCCTC  750

seq1  TCTGTCTGTATGCATGTATGCTCTTGTATATTTCAAGCATCTTGATCTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTGTATGCATGTATGCTCTTGTATATTTCAAGCATCTTGATCTGT  800

seq1  CTGTGTATGCATTAACGTTTCTTGTTATTTTGTAATATTTCTATTTTAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTATGCATTAACGTTTCTTGTTATTTTGTAATATTTCTATTTTAGC  850

seq1  TATTCTATATAATACAGAACATGATTATTAGAATGTGGATATTATTCATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTATATAATACAGAACATGATTATTAGAATGTGGATATTATTCATA  900

seq1  TGGAAATTCTATAACCCATTTAAACAAATGAGTACCATTACTAAGAAAAA  950
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TGGAAATTCTATAACCCATTTAAAC-AATGAGTACCATTACTAAGAAAAA  949

seq1  AAGTGTCCCTTTTCCTGAAATCCAAATAAAAACTCTATTTGGCTTTGAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTCCCTTTTCCTGAAATCCAAATAAAAACTCTATTTGGCTTTGAAA  999

seq1  AAAAAAGAGTTAGAGGGAGCTTCCACTGACATCAGGTTAACTGAGGTGGA  1050
      |||||||||||||||||||||| ||||||||||||  | ||||| |||||
seq2  AAAAAAGAGTTAGAGGGAGCTTTCACTGACATCAG--TTACTGA-GTGGA  1046

seq1  CTGAAACAAATATGTTAGTCAGGGTTCTC-TAGAATAACTGAACTAGAAT  1099
      |||||||||  |||||||||||||||||| ||| ||| ||| ||||||||
seq2  CTGAAACAATAATGTTAGTCAGGGTTCTCTTAGGATACCTG-ACTAGAAT  1095

seq1  ACTGATA-GACTTGAACCTATAT--ATCTTTCAATCTCTA  1136
      ||||||| |||||| | ||||||   ||||||||||||||
seq2  ACTGATAGGACTTGGAACTATATTATTCTTTCAATCTCTA  1135


seq1: chr3_74881353_74882403
seq2: B6Ng01-337A11.g_63_1131 (reverse)

seq1  TCAGT-TTTCTATCA-TCTT-GCTGTACATGAGGATATTT--CTCTTAG-  44
      ||||| ||||||||| |||| |||||||||||||||||||   |||||| 
seq2  TCAGTATTTCTATCATTCTTGGCTGTACATGAGGATATTTTCTTCTTAGT  50

seq1  TACAAGATCCA--TCCCTC--AATA-TCTGAGCA-GATG-TTTAAGG-TT  86
      |||||||||||  ||||||  |||| | |||||| |||| ||||||| ||
seq2  TACAAGATCCAATTCCCTCCAAATATTTTGAGCAGGATGTTTTAAGGTTT  100

seq1  CTGGGATTTTG-AAGAAG-TTTCAGTTCCAGTTTCATAT--CAAAAACAC  132
      ||||||||||| |||||| ||||||||||||||||||||   ||||||||
seq2  CTGGGATTTTGAAAGAAGTTTTCAGTTCCAGTTTCATATTCAAAAAACAC  150

seq1  TACATTATTGATAGAACAGTACAAAAACAAACAAACAAACAACAACAACA  182
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TACATTATTGATAG-ACAGTACAAAAACAAACAAACAAACAACAACAACA  199

seq1  ACAACAGTCTGCACAAAACCAAATGATCATGCAGTCATTTCATTCTCCCA  232
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAGTCTGCACAAAACCAAATGATCATGCAGTCATTTCATTCTCCCA  249

seq1  CATGTTTT-GGTTCTTGATTCAGTTTAGGCTGCATAAAATGACTTTAAAA  281
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTTGGGTTCTTGATTCAGTTTAGGCTGCATAAAATGACTTTAAAA  299

seq1  TTAAATTTCAAGTACTGGAAAATGGGTGGTTTATTCAATTACCAAGAATT  331
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTTCAAGTACTGGAAAATGGGTGGTTTATTCAATTACCAAGAATT  349

seq1  TTATTATTAATAATCATAACTACATAAGACGTCTATTATGTAGGATGATG  381
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTAATAATCATAACTACATAAGACGTCTATTATGTAGGATGATG  399

seq1  GTTCAAAAACATTTTAAAATTTGGCATGAGTACAAGAATGAGCTTCTTTG  431
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAAAACATTTTAAAATTTGGCATGAGTACAAGAATGAGCTTCTTTG  449

seq1  TTTGTTGCACTATTTCCTCCTTAGGCATATTCCTAAAATCATGACTTGCT  481
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGCACTATTTCCTCCTTAGGCATATTCCTAAAATCATGACTTGCT  499

seq1  TTACCTACATTGCAAGAAGTGGTCATTTTCTCTGCACCTAAAAATATATC  531
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTACATTGCAAGAAGTGGTCATTTTCTCTGCACCTAAAAATATATC  549

seq1  ACTTTCAATAATAAATGTATTGATGTACATATATGTGTGTTTATGCATGC  581
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCAATAATAAATGTATTGATGTACATATATGTGTGTTTATGCATGC  599

seq1  ATATGTGTTTGTACATAACACACGCACGCACACACACACACCACACACAC  631
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTGTTTGTACATAACACACGCACGCACACACACACACCACACACAC  649

seq1  AAACATTTTATATATAATATATATATATATATCAGAATGACACTCTATTC  681
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTTTATATATAATATATATATATATATCAGAATGACACTCTATTC  699

seq1  TGCAATTGTAAATTTATTTGCAAAAGCACCATTATTCTTGATATATCAAT  731
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATTGTAAATTTATTTGCAAAAGCACCATTATTCTTGATATATCAAT  749

seq1  GAGGTGTTTCTCTAGTATCATTTGTCACAGAAAAATGCATGTTAAAATGA  781
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGTTTCTCTAGTATCATTTGTCACAGAAAAATGCATGTTAAAATGA  799

seq1  CATTTATCTTATAAGAAATGCCTGTTTCGATATGAGTCATTCTTTAGCTA  831
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATCTTATAAGAAATGCCTGTTTCGATATGAGTCATTCTTTAGCTA  849

seq1  TCACCTTAAGCGGCAGTACTTTAATCTAAGTAGAAAATAACCTTTTAGTA  881
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTTAAGCGGCAGTACTTTAATCTAAGTAGAAAATAACCTTTTAGTA  899

seq1  TGTATTATGCTATAACATCATTTTCTCAAGAATATCCTTATAAACTATTA  931
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTATGCTATAACATCATTTTCTCAAGAATATCCTTATAAACTATTA  949

seq1  ATGCAGTAAATATAATAGGTATTTACCAGTGGTTCCTTTGCAGTTTTTGA  981
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGTAAATATAATAGGTATTTACCAGTGGTTCCTTTGCAGTTTTTGA  999

seq1  ATTTCCCAAGTTTGACCTCTCATTTTGATTGCTGCATTTCAATGATGTGT  1031
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCCAAGTTTGACCTCTCATTTTGATTGCTGCATTTCAATGATGTGT  1049

seq1  TGGTGTCTTGAGATGAATTC  1051
      ||||||||||||||||||||
seq2  TGGTGTCTTGAGATGAATTC  1069


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