BAC Information

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BAC

Clone NameB6Ng01-337O08
Chromosome3 (Build37)
Map Location 72,264,633 - 72,265,778
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667385, LOC100041459
Downstream gene2010204N08Rik, Slitrk3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337O08.bB6Ng01-337O08.g
ACCGA122371GA122372
length1,1381,159
definitionB6Ng01-337O08.b B6Ng01-337O08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaagagtaatcaaccaaataacataaattgcctgctgatgaga
gtatttttctgagtccttggtgtgtagtttgtttggggactatatgatta
attaaaatacaagatatgttttaaacattcgtttttgagattataattac
aacatttctcctatttccttcctccaaaccttcccacaccgcccctgttc
ttcttccaactcacagctctttttgtactaaaaaatattacatgcattta
tttgtttattcagatatattccttcatataacccacttagccaatataat
atttttcatgctagtttccccagctgactatttggcactcaacaatgttt
ctgtgctctttcccaggtagactactcctccctctcccacctttcttcag
tatctatagtttgttgtggaggcttgagtgcttgtgggcttaaccttgtc
atttttggaatgtctgtgttgtctttgctcagctcacattcaggcaatca
ttttggaaagttttttaaatgactgaggtgaaatttcttaccccaaacaa
tgacttaatgtactacaccaacttaactttaaactccagagcttaaactc
tattcaaatgcatctctataaagccattagtattgcaccattttggttgt
tttcctgacaaacctattgaaaatgtaaaattctcctttgatgttagttt
atcactagcaatatctattgtctctaacatgacaacactcttgttcatat
cattttcttattgcaaggtgcaatcacacagctttcaaatctattaatta
aacatcactggaaaatgcaggtaatgctccttcagtatcatttatgcctc
taggtttcctattgaaacttcactgtaattactgttggtttttccagtta
tgacctctccttcttccagaggttaagaatatggtttgttataaactgtc
agtaccatgatttgtttgcttcttgcctgtgaattattgcagtgccatag
aaaactaattgtatttttataaagctaatgcttctagaaaacaaagctct
actactactattagtagaaactatatttgatactatactccaatagtcac
agactatggttatggggaaaggcaatgtaccttcaaat

gaattctatctaccaaggctgctctggatacagctactgctgagtgccag
atatgccaatagcagagatcagcattaagccccagaaataaaaccatttt
acagggaccatctagcaacctaggggtaggttggcttcattggatcactt
ctatcatgaaaaggaccatgatttgactttatttgaataaacttttattc
caattatggattttcctttcttacatttagctttcttctaaacatacgat
ctgtagtggctattcctggttgtcaacttgactatatctggaatgaacta
gaatctagaattggaaggctcaccagtgatcctaatctggaggctgggag
atacaagttcctgacctggatattggcaaaaatattggaggcatagtggc
tatgaattccagaagattaagaaagggagatctcttgacttcaaggtcat
ctctgattaaaggtatggtgacacacacctttaatctggaccacatcttc
tgctggagacctacataaggacattagaagaaggaaaatttcctctttct
ctcattaggttgtttgccttgtgggactgagcaacggctagatccttgga
cttccattcacagctgctgctgaccattgttgggagttggacaatagatt
gaaagtcatcaacaaattcccttactatacagagactacccataagttct
gtgactctagagaaccctgactaataaaccatccatggacttttaaaatg
ccttatccacaattatggcctgacatgccacacaacattgcttctaactt
aagaactcactttcatatccagagaagtacaacaggggggatcatgctct
ttccttgattctcatcatcacagagcagttggctgagtagactgacagaa
aggccttctgaatatagttttgaatgtagttacagcaacaatttactatt
gagggctgggacaggctctgcagagacagtgtatgggtttgatcagagtc
cagaatgtggtatagtttctcatgtagtcagaataaacaggtccaggaat
cagggttgaaaggaaagaatccccttcaatattaccccttagtgaacaca
ctagggagctctgctctggactaggttactgctaactcatttttggttcc
gagaagaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_72264633_72265778
seq2: B6Ng01-337O08.b_47_1184

seq1  GAATTCAAAAGAGTAATCAACCAAATAACATAAATTGCCTGCTGATGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAGAGTAATCAACCAAATAACATAAATTGCCTGCTGATGAGA  50

seq1  GTATTTTTCTGAGTCCTTGGTGTGTAGTTTGTTTGGGGACTATATGATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTTCTGAGTCCTTGGTGTGTAGTTTGTTTGGGGACTATATGATTA  100

seq1  ATTAAAATACAAGATATGTTTTAAACATTCGTTTTTGAGATTATAATTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAATACAAGATATGTTTTAAACATTCGTTTTTGAGATTATAATTAC  150

seq1  AACATTTCTCCTATTTCCTTCCTCCAAACCTTCCCACACCGCCCCTGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTCTCCTATTTCCTTCCTCCAAACCTTCCCACACCGCCCCTGTTC  200

seq1  TTCTTCCAACTCACAGCTCTTTTTGTACTAAAAAATATTACATGCATTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCAACTCACAGCTCTTTTTGTACTAAAAAATATTACATGCATTTA  250

seq1  TTTGTTTATTCAGATATATTCCTTCATATAACCCACTTAGCCAATATAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTATTCAGATATATTCCTTCATATAACCCACTTAGCCAATATAAT  300

seq1  ATTTTTCATGCTAGTTTCCCCAGCTGACTATTTGGCACTCAACAATGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCATGCTAGTTTCCCCAGCTGACTATTTGGCACTCAACAATGTTT  350

seq1  CTGTGCTCTTTCCCAGGTAGACTACTCCTCCCTCTCCCACCTTTCTTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCTCTTTCCCAGGTAGACTACTCCTCCCTCTCCCACCTTTCTTCAG  400

seq1  TATCTATAGTTTGTTGTGGAGGCTTGAGTGCTTGTGGGCTTAACCTTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATAGTTTGTTGTGGAGGCTTGAGTGCTTGTGGGCTTAACCTTGTC  450

seq1  ATTTTTGGAATGTCTGTGTTGTCTTTGCTCAGCTCACATTCAGGCAATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGGAATGTCTGTGTTGTCTTTGCTCAGCTCACATTCAGGCAATCA  500

seq1  TTTTGGAAAGTTTTTTAAATGACTGAGGTGAAATTTCTTACCCCAAACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGAAAGTTTTTTAAATGACTGAGGTGAAATTTCTTACCCCAAACAA  550

seq1  TGACTTAATGTACTACACCAACTTAACTTTAAACTCCAGAGCTTAAACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTAATGTACTACACCAACTTAACTTTAAACTCCAGAGCTTAAACTC  600

seq1  TATTCAAATGCATCTCTATAAAGCCATTAGTATTGCACCATTTTGGTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAAATGCATCTCTATAAAGCCATTAGTATTGCACCATTTTGGTTGT  650

seq1  TTTCCTGACAAACCTATTGAAAATGTAAAATTCTCCTTTGATGTTAGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGACAAACCTATTGAAAATGTAAAATTCTCCTTTGATGTTAGTTT  700

seq1  ATCACTAGCAATATCTATTGTCTCTAACATGACAACACTCTTGTTCATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTAGCAATATCTATTGTCTCTAACATGACAACACTCTTGTTCATAT  750

seq1  CATTTTCTTATTGCAAGGTGCAATCACACAGCTTTCAAATCTATTAATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTTATTGCAAGGTGCAATCACACAGCTTTCAAATCTATTAATTA  800

seq1  AACATCACTGGAAAATGCAGGTAATGCTCCTTCAGTATCATTTATGCCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCACTGGAAAATGCAGGTAATGCTCCTTCAGTATCATTTATGCCTC  850

seq1  TAGGTTTCCTATTGAAACTTCACTGTAATTACTGTTGGTTTTTCCAGTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTTCCTATTGAAACTTCACTGTAATTACTGTTGGTTTTTCCAGTTA  900

seq1  TGACCTCTCCTTCTTCCAGAGGTTAAGAATATGGTTTGTTATAAACTGTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTCTCCTTCTTCCAGAGGTTAAGAATATGGTTTGTTATAAACTGTC  950

seq1  AGTACCATGATTTGTTTGCTTCTTGCCTGTGAAATTATTGCAGTGCCATA  1000
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGTACCATGATTTGTTTGCTTCTTGCCTGTG-AATTATTGCAGTGCCATA  999

seq1  GAAAACTAATTGTA-TTTTATAAAGCTAAATGCTTCTAG-AAACAAAGCT  1048
      |||||||||||||| |||||||||||| ||||||||||| ||||||||||
seq2  GAAAACTAATTGTATTTTTATAAAGCT-AATGCTTCTAGAAAACAAAGCT  1048

seq1  TCCAACTACTACTATTAGTAGAAACTTATAATTTGAATACTTATACTCCA  1098
        | ||||||||||||||||||||| ||| ||||| |||| |||||||||
seq2  --CTACTACTACTATTAGTAGAAAC-TAT-ATTTG-ATAC-TATACTCCA  1092

seq1  ATAAGTTCACAGACCTATGGTTAT-GGGAAAGGCAATGTACCTTAAAAT  1146
      |||   ||||||| |||||||||| ||||||||||||||||||| ||||
seq2  ATA--GTCACAGA-CTATGGTTATGGGGAAAGGCAATGTACCTTCAAAT  1138


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