BAC Information

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BAC

Clone NameB6Ng01-339F22
Chromosome3 (Build37)
Map Location 17,663,065 - 17,664,171
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040059, EG383936, LOC622737
Downstream geneENSMUSG00000074674, LOC100040120, Cypt12, LOC545508, Bhlhb5, Cyp7b1, LOC622921, LOC100040153
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-339F22.bB6Ng01-339F22.g
ACCGA123382GA123383
length9091,102
definitionB6Ng01-339F22.b B6Ng01-339F22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgggaagactttgatttctttctttatttcttccttgaccaagt
tatctttgagtaaagagttattcattttccatggttatctgggttttctg
ttgtttttgttgttattaatgtctagccttcgtctatggtggtctaatag
gaagcataggattatttcaggctccttgtatatgttgaggcttattttgt
gactgattatatggtaaattttggagaaggtaccatgaggtgttgagaat
ttatattctttcattttagggtgaaacattttgtagatatctgtaaaatc
catttggttcaccacctcgattagttttactgtgtctctgtttagtttct
gtttcaatggcctatcttatctatcggtgagagtagggttttgaagtctc
ccactattactgtgggttcagtctttattttgagctttagcaaagtttct
tttatgaatgtgagtggccttgcatttggggcatacatgctcacaattga
gactttgtcttggtgtgtttttcctttgatgaatatgaagtacctttccc
catcttgcttgatatctttttgttgaagatctatattattggatagagaa
tggcaactcccacttgtgtttttttgaaccacttgcttggaaccacttgc
ttttttcagccctttactcttaggtctacctttgtcattgaggtgtgtgt
cttgtattcagcaaaatgctggatcctgcttgtgtatccagtctgttaga
ttatgcctttggggggattaagtctgttgatattgagagatattaaaggc
agatgattgttatttcctgttatgtttgttgtagtagggtgggctatctt
agttcagggttttctattctctgcacaaacaatcatgaaccaagaagcaa
gtttgggga

gaattcatctcacgtaaattcctacaacactatcccaaagtttcatgatt
tcactggtattaaattctaggtgtatgaaagcaactagacagtgctcatc
tacatttgttcaatcatgtttacaggagcaggtaaaggttgaccagccca
gggtttctgtgaaatctcgaagcttttaatgaacaggagcaccttatgat
aagagatttgccttgtattggtcattcttttctagaagtagaaaaatact
acatttaaggaaagaaagtcagaggggacaatataaggagggaatgaaaa
atgtgaaataaaagaataaaaaaaacatagaaacccaggtataccactaa
acaagaaaaattctacctttgcctcccaactgtaccacaaacttgcacta
tctgattcatttaatttttgcctgagtgtacttatacaagacctttggag
atgtcagaatctgatactgagcagacatggcacactgaaagacttttgtc
atgaagacaatgaattttcaaactagttcaagagtaattgaaaatggaat
tctgagacaagctgaggtgtgtttttaatctccacataaacacatcaaca
cttattttaagtctgccagctatggatcttcgagaaaacactcaatacct
ctccttgtacattgagaagatcattgacttttctctcaaaaatataatag
taccatcattcgaagcaaaaaatttctctttgtgtgataaaatattgccc
tcccagagattctgccttatattttaaaagacagagcaattcatgttagt
ctccagattaatgacagaaaaagatctcaaacttggaaccataatatcac
aaattcttgaagctgtagagagtgtaagagagcattggattcaatcctat
tattctgtaggtaaaatggccaacccttaaatgtccctaatacccaagct
gccattactctcctttacaaaattgactgatcttttttgtaacagcagat
tccaaagttttagaagaaaagataaaatcatagtagtagcagtgtctcct
tagctctaggatgtttttttttttaatcagactgtgctttaattctggta
gt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_17663065_17664171
seq2: B6Ng01-339F22.g_68_1169

seq1  GAATTCATCTCACGTAAATTCCTACAACACTATCCCAAAGTTTCATGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTCACGTAAATTCCTACAACACTATCCCAAAGTTTCATGATT  50

seq1  TCACTGGTATTAAATTCTAGGTGTATGAAAGCAACTAGACAGTGCTCATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGGTATTAAATTCTAGGTGTATGAAAGCAACTAGACAGTGCTCATC  100

seq1  TACATTTGTTCAATCATGTTTACAGGAGCAGGTAAAGGTTGACCAGCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTGTTCAATCATGTTTACAGGAGCAGGTAAAGGTTGACCAGCCCA  150

seq1  GGGTTTCTGTGAAATCTCGAAGCTTTTAATGAACAGGAGCACCTTATGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTCTGTGAAATCTCGAAGCTTTTAATGAACAGGAGCACCTTATGAT  200

seq1  AAGAGATTTGCCTTGTATTGGTCATTCTTTTCTAGAAGTAGAAAAATACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATTTGCCTTGTATTGGTCATTCTTTTCTAGAAGTAGAAAAATACT  250

seq1  ACATTTAAGGAAAGAAAGTCAGAGGGGACAATATAAGGAGGGAATGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTAAGGAAAGAAAGTCAGAGGGGACAATATAAGGAGGGAATGAAAA  300

seq1  ATGTGAAATAAAAGAATAAAAAAAACATAGAAACCCAGGTATACCACTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAAATAAAAGAATAAAAAAAACATAGAAACCCAGGTATACCACTAA  350

seq1  ACAAGAAAAATTCTACCTTTGCCTCCCAACTGTACCACAAACTTGCACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAAAAATTCTACCTTTGCCTCCCAACTGTACCACAAACTTGCACTA  400

seq1  TCTGATTCATTTAATTTTTGCCTGAGTGTACTTATACAAGACCTTTGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTCATTTAATTTTTGCCTGAGTGTACTTATACAAGACCTTTGGAG  450

seq1  ATGTCAGAATCTGATACTGAGCAGACATGGCACACTGAAAGACTTTTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAGAATCTGATACTGAGCAGACATGGCACACTGAAAGACTTTTGTC  500

seq1  ATGAAGACAATGAATTTTCAAACTAGTTCAAGAGTAATTGAAAATGGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGACAATGAATTTTCAAACTAGTTCAAGAGTAATTGAAAATGGAAT  550

seq1  TCTGAGACAAGCTGAGGTGTGTTTTTAATCTCCACATAAACACATCAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGACAAGCTGAGGTGTGTTTTTAATCTCCACATAAACACATCAACA  600

seq1  CTTATTTTAAGTCTGCCAGCTATGGATCTTCGAGAAAACACTCAATACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTTAAGTCTGCCAGCTATGGATCTTCGAGAAAACACTCAATACCT  650

seq1  CTCCTTGTACATTGAGAAGATCATTGACTTTTCTCTCAAAAATATAATAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTGTACATTGAGAAGATCATTGACTTTTCTCTCAAAAATATAATAG  700

seq1  TACCATCATTCGAAGCAAAAAATTTCTCTTTGTGTGATAAAATATTGCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATCATTCGAAGCAAAAAATTTCTCTTTGTGTGATAAAATATTGCCC  750

seq1  TCCCAGAGATTCTGCCTTATATTTTAAAAGACAGAGCAATTCATGTTAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGAGATTCTGCCTTATATTTTAAAAGACAGAGCAATTCATGTTAGT  800

seq1  CTCCAGATTAATGACAGAAAAAGATCTCAAACTTGGAACCATAATATCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGATTAATGACAGAAAAAGATCTCAAACTTGGAACCATAATATCAC  850

seq1  AAATTCTTGAAGCTGTAGAGAGTGTAAGAGAGCATTGGATTCAATCCTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTTGAAGCTGTAGAGAGTGTAAGAGAGCATTGGATTCAATCCTAT  900

seq1  TATTCTGTAGGTAAAATGGCCAAACCCTTAAATGTCCCTAATACCCAAGC  950
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TATTCTGTAGGTAAAATGGCC-AACCCTTAAATGTCCCTAATACCCAAGC  949

seq1  TGCCCATTACTCTCCTTTACAAAATTGACTGATC-TTTTTGTAACAAGCA  999
      || ||||||||||||||||||||||||||||||| |||||||||| ||| 
seq2  TG-CCATTACTCTCCTTTACAAAATTGACTGATCTTTTTTGTAAC-AGC-  996

seq1  AGATTCCAAAGTTTTAGA--GAAAGATAAAATCATAGTAGGTAGCAGTGT  1047
      ||||||||||||||||||   |||||||||||||||||| ||||||||||
seq2  AGATTCCAAAGTTTTAGAAGAAAAGATAAAATCATAGTA-GTAGCAGTGT  1045

seq1  CTCTTTAGTTCTAGAATGTTTTTTTTTTTTTATCAGAAATGTGCTTTTAT  1097
      ||| |||| ||||| ||| ||||||||||| ||||| | ||||||||   
seq2  CTCCTTAGCTCTAGGATG-TTTTTTTTTTTAATCAG-ACTGTGCTTT--A  1091

seq1  ATTCT-GTAGT  1107
      ||||| |||||
seq2  ATTCTGGTAGT  1102


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