BAC Information

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BAC

Clone NameB6Ng01-340C05
Chromosome3 (Build37)
Map Location 16,276,056 - 16,277,022
singlet/doubletsinglet
Overlap geneLOC100040034
Upstream geneLOC751864, Sirpb1, LOC668101, LOC100038947, LOC622425, LOC664795, LOC381484, Ythdf3
Downstream geneLOC100040059, EG383936, LOC622737
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-340C05.bB6Ng01-340C05.g
ACCGA123933GA123934
length1,034804
definitionB6Ng01-340C05.b B6Ng01-340C05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctataccccatttttaatttttttttctggagt
aaattttcttgagttctttatatatattggatattattcccctatctgat
ttaggattagtaaggatcctctcccaatcagttggtggcattggtcttat
tgacagtgtcttttgccttacagaagcttggcaatgttattaggtcccat
ttatcaatattcaatcttacagcacaagccattgctgttctgttcaggaa
tttttcttttgtgctcatatcttcaaggcttttcaccactttcccctcta
taagtttcagtttctctagttttatgtggagttccttgagcctcttagac
ttgagctttgtaaaaggagatatccccttgatgtccatttgttgtcgaat
tgttttgtctagaacttcaagtactattttgaataggtagggagaaagtg
ggcagccttctctagtccctgattttagtgggattgtttcgggtttctct
ccatttagtttgatgttggctactggtttgctgtatattgcttttattat
gtttaggaattcagtttctttagagaacctatccagttggccatgattgt
ttgatgcccactggctgaataagatcaacaatggatgaggccattttgct
ttcttagcagaggctggcaccagggacttgttctgtgtgccagagattgt
tagtatttctccactgacttcttcactaacagaagtttcctctgggctat
tttacatatatatatatatatatatatatatatatatatatatatatatt
ttttttttcagtgtgctttacctcaaagcaggcactgtaattccagacaa
tgggatgtgatatgttacaatagtttgtattgtaagttacctatccctcc
ccctatcttatttcttccctttctgtggctgaatagagaagttagtcaag
atcatctttgttttaaccccatctgttcaacaccattgagctacgtgcaa
acatggacttacattcttcattggtgaggaaaac

gaattctagaaagtcttttaatttcctttttcttctgtaactcagtggtt
gttgggtaggaagttattcagtttccattagtttattggatttctgtttt
ttctgttgatgttgaagtttagaattaatccatgatggtctgacaagata
tagtgagcaaatgtatttgcttgtatctgttgaggctttctttgtgatca
agtatatggtcaattttggaaaattttctgtgaggtactgagaataaggt
atattattttgttttgttttgtttggtgaaattttcagcaactatctgtt
atgtacatttaattcataacatctgttagtttcattatttctctgtttaa
tttctgtctggacaatctgtccattggtgaccatggagtgttgatgcctg
tcactattaatgtatggaatttggtgtgtcatttaagttttaatactatt
tctcttatgaatgtcagtgccctggtattttggacatgggtattcagaat
tgagatagccttctggtggattttttcctttgatgggcatgaaagggttt
ccttagtcccttttcatttcttttggttgaaagtctattttattgcctat
tagaatggctacttcatgcctacctttgatgcacaggtgtatttctggta
tgtagctgaatgatggattctattttcagttgtattctgctgacctgtgt
ctttttactggggaattaagtccactgattttgagagatattaattacca
atgactactaattcttgttattttaatgttggtggtgtttgtgtgtgtgt
gtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_16276056_16277022
seq2: B6Ng01-340C05.b_109_1078

seq1  TCTTTATATATATTGGATATTATTCCCCTATCTGATTTAGGATTAGTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATATATATTGGATATTATTCCCCTATCTGATTTAGGATTAGTAAG  50

seq1  GATCCTCTCCCAATCAGTTGGTGGCATTGGTCTTATTGACAGTGTCTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTCTCCCAATCAGTTGGTGGCATTGGTCTTATTGACAGTGTCTTTT  100

seq1  GCCTTACAGAAGCTTGGCAATGTTATTAGGTCCCATTTATCAATATTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTACAGAAGCTTGGCAATGTTATTAGGTCCCATTTATCAATATTCAA  150

seq1  TCTTACAGCACAAGCCATTGCTGTTCTGTTCAGGAATTTTTCTTTTGTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACAGCACAAGCCATTGCTGTTCTGTTCAGGAATTTTTCTTTTGTGC  200

seq1  TCATATCTTCAAGGCTTTTCACCACTTTCCCCTCTATAAGTTTCAGTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATCTTCAAGGCTTTTCACCACTTTCCCCTCTATAAGTTTCAGTTTC  250

seq1  TCTAGTTTTATGTGGAGTTCCTTGAGCCTCTTAGACTTGAGCTTTGTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTTTTATGTGGAGTTCCTTGAGCCTCTTAGACTTGAGCTTTGTAAA  300

seq1  AGGAGATATCCCCTTGATGTCCATTTGTTGTCGAATTGTTTTGTCTAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATATCCCCTTGATGTCCATTTGTTGTCGAATTGTTTTGTCTAGAA  350

seq1  CTTCAAGTACTATTTTGAATAGGTAGGGAGAAAGTGGGCAGCCTTCTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAGTACTATTTTGAATAGGTAGGGAGAAAGTGGGCAGCCTTCTCTA  400

seq1  GTCCCTGATTTTAGTGGGATTGTTTCGGGTTTCTCTCCATTTAGTTTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTGATTTTAGTGGGATTGTTTCGGGTTTCTCTCCATTTAGTTTGAT  450

seq1  GTTGGCTACTGGTTTGCTGTATATTGCTTTTATTATGTTTAGGAATTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCTACTGGTTTGCTGTATATTGCTTTTATTATGTTTAGGAATTCAG  500

seq1  TTTCTTTAGAGAACCTATCCAGTTGGCCATGATTGTTTGATGCCCACTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTAGAGAACCTATCCAGTTGGCCATGATTGTTTGATGCCCACTGG  550

seq1  CTGAATAAGATCAACAATGGATGAGGCCATTTTGCTTTCTTAGCAGAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATAAGATCAACAATGGATGAGGCCATTTTGCTTTCTTAGCAGAGGC  600

seq1  TGGCACCAGGGACTTGTTCTGTGTGCCAGAGATTGTTAGTATTTCTCCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACCAGGGACTTGTTCTGTGTGCCAGAGATTGTTAGTATTTCTCCAC  650

seq1  TGACTTCTTCACTAACAGAAGTTTCCTCTGGGCTATTTTACATATATATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTCTTCACTAACAGAAGTTTCCTCTGGGCTATTTTACATATATATA  700

seq1  TATATATATATATATATATATATATATATATATATTTTTTTTTTCAGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATATATATATATATATATATTTTTTTTTTCAGTGT  750

seq1  GCTTTACCTCAAAGCAGGCACTGTAATTCCAGACAATGGGATGTGATATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTACCTCAAAGCAGGCACTGTAATTCCAGACAATGGGATGTGATATG  800

seq1  TTACAATAGTTTGTATTGTAAGTTACCTATCCCTCCCCCTATCTTATTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAATAGTTTGTATTGTAAGTTACCTATCCCTCCCCCTATCTTATTTC  850

seq1  TT-CCTTTCTGTGGCTGAATAGAGAAGTTAGTCAAGATCATCTTTGTTTT  899
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTTCTGTGGCTGAATAGAGAAGTTAGTCAAGATCATCTTTGTTTT  900

seq1  AACCCCATCTGTTCAACACCATTGAGCTACGTGCAAACATGGAC-TACAA  948
      |||||||||||||||||||||||||||||||||||||||||||| |||| 
seq2  AACCCCATCTGTTCAACACCATTGAGCTACGTGCAAACATGGACTTACAT  950

seq1  TCTTCATT-GTGAGAAAAAC  967
      |||||||| ||||| |||||
seq2  TCTTCATTGGTGAGGAAAAC  970


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