BAC Information

Click to search

BAC

Clone NameB6Ng01-340I09
Chromosome3 (Build37)
Map Location 120,716,782 - 120,867,717
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream gene2510027J23Rik, LOC435752, Tmem56, LOC668778, LOC668780, Alg14, Ppia-ps3_1234.1, Cnn3, Slc44a3, A730020M07Rik, 4930432M17Rik, F3, Abcd3, LOC100043298, Arhgap29, Abca4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-340I09.bB6Ng01-340I09.g
ACCGA124204GA124205
length988914
definitionB6Ng01-340I09.b B6Ng01-340I09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,866,727 - 120,867,717)(120,716,782 - 120,716,974)
sequence
gaattctatgaaattattaattcatctaaacagcattaatttatgaaagt
tcatctttatgttgatctgcaggaaatctgctcagtacactaatgcccag
ggtttattatgttaatttaaaatgacaggagctgcaagactgagatggag
ttttaggaaaaagtcagtgatttgctacaaggatttataagactcagaga
atctgttaaactcataattgcatttcgttatatattagcaggggagagca
agtcagtcaagaggaaggtagaggggaacccatgcgcaagctaccggaca
tgggcctctggtggacttggacaagcatggcagatcatcgcaacggcagt
gtgtgactgtgagaagtgttgccagccaggaaagtgcacattttcacaca
ctgtagcagttaggagggaattagcttcattagagactgaagctttggag
agcagtgatattaggtgtttcgggacaatttaaaatgtttgcttttatca
ggcttcacctaggaatacacccctgcatggctgacgtcaacctcagagca
agaagattcactgcagtaccagggtgaagtgtaaatcattcggtttgtct
gggaccatgggttccaaaccctcacacatacgaaacacacttctatcagg
actcaggctcatctacgcaacccaggcctgttaagttctccccattcttc
atagcagcattgttgaggtcgtgggtcatgcttgagaatggtgcttcagg
gagaaatggcataagaagttacagtttaagcagttatgaggagaagttgc
agtttaagcagttatggggaggccggtaatgggaaatgggaataggtgac
tagagttatattttgtggaggttgactagcagtagagatagagatatgtt
ctgaagcttgctgaggaattagcattgggttcttgtggtggattataaac
aaacattttctaacagagaaggcagggatggtgggaga
gaattcactggaggagatataaagaaaccaccagataaggctttattctc
attttgtgccttcaacctgtaatccactctctaaccctcacctgagcaag
aacacactctcccatgagaagaattccagcttaccttctctgacaatgca
gtttatatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaaggcct
gtatacttattttgtgtaccatatttcctctttgttcctactctctctcc
ccactttacttctgatagcttgtcctgaatttcctctagaattttcagcc
ctatcttaatcacttgataacatgtgaaaaggaacaaaagggctcctaac
accagaaaaaattcaaggccaaacatattccactttacttctgatagact
gtcttgaatttccttagaaagttcaagatcagacttacctcgtaaagctg
tactcactggtactctcgttccccagctgaaaagttctgaattcatacag
ttgaatccttcttaacagtctgctttacgggaacctttattaccgcgacc
cgcagttctggttctggaatgagggatcttccttgcgccagtcccgagtt
ttttctcgtcccggaattcggcaccaattgttattagacgcgttctcacg
cccggccaggaagaacacccacagaccagaatcttctgcggcaaagcttt
attgcttacatcttcaggagcaagagtgtaagaagcaagagagagagaaa
acgaaaccccgtcccttttttaggagagttatatttcgcctaggacgtgt
cactccctgattggctgcagcccatcggccgagttgacgtcacggggaag
gcagagcacatggagtggagaaccaccctcggcatatgcgcagataattt
gtttaccacttaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_120866727_120867717
seq2: B6Ng01-340I09.b_42_1029 (reverse)

seq1  TCTCCCACCCTCCCTGCCTTCTCTTGTTTAGAAAATGTTTGTTTATAAAC  50
      ||||||||| ||||||||||||||   ||||||||||||||||||||| |
seq2  TCTCCCACCATCCCTGCCTTCTCT--GTTAGAAAATGTTTGTTTATAATC  48

seq1  CACCACAAGAACCCAATGCTAATTCCTCAACAAGCTTCAG-ACCTCTCTC  99
      ||||||||||||||||||||||||||||| |||||||||| || | ||||
seq2  CACCACAAGAACCCAATGCTAATTCCTCAGCAAGCTTCAGAACATATCTC  98

seq1  TCTCTCTACTGCTTGTCAACCTCCACAAAATATAACTCTAGTCACCTATT  149
      | ||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TATCTCTACTGCTAGTCAACCTCCACAAAATATAACTCTAGTCACCTATT  148

seq1  CCCATTTTCCCATTAACCGGCCTCCCCATAACTGCTTAAACTGCAACTTC  199
      |||| ||||||||| |||||||||||||||||||||||||||||||||||
seq2  CCCA-TTTCCCATT-ACCGGCCTCCCCATAACTGCTTAAACTGCAACTTC  196

seq1  TCCTCATAACTGCTTAAACTGTAACTTCTAATGCCATTTCTCCCTGAAGC  249
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TCCTCATAACTGCTTAAACTGTAACTTCTTATGCCATTTCTCCCTGAAGC  246

seq1  ACCATTCTCAAGCATGACCCACGACCTCAACAATGCTGCTATGAAGAATG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTCTCAAGCATGACCCACGACCTCAACAATGCTGCTATGAAGAATG  296

seq1  GGGAGAACTTAACAGGCCTGGGTTGCGTAGATGAGCCTGAGTCCTGATAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAACTTAACAGGCCTGGGTTGCGTAGATGAGCCTGAGTCCTGATAG  346

seq1  AAGTGTGTTTTGTATGTGTGAGGGTTTGGAACCCATGGTCCCAGACAAAC  399
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGTTTCGTATGTGTGAGGGTTTGGAACCCATGGTCCCAGACAAAC  396

seq1  CGAATGATTTACACTTCACCCTGGTACTGCAGTGAATCTTCTTGCTCTGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAATGATTTACACTTCACCCTGGTACTGCAGTGAATCTTCTTGCTCTGA  446

seq1  GGTTGACGTCAGCCATGCAGGGGTGTATTCCTAGGTGAAGCCTGATAAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGACGTCAGCCATGCAGGGGTGTATTCCTAGGTGAAGCCTGATAAAA  496

seq1  GCAAACATTTTAAATTGTCCCGAAACACCTAATATCACTGCTCTCCAAAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACATTTTAAATTGTCCCGAAACACCTAATATCACTGCTCTCCAAAG  546

seq1  CTTCAGTCTCTAATGAAGCTAATTCCCTCCTAACTGCTACAGTGTGTGAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTCTCTAATGAAGCTAATTCCCTCCTAACTGCTACAGTGTGTGAA  596

seq1  AATGTGCACTTTCCTGGCTGGCAACACTTCTCACAGTCACACACTGCCGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AATGTGCACTTTCCTGGCTGGCAACACTTCTCACAGTCACACACTGCCGT  646

seq1  TGCGATGATCTGCCATGCTTGTCCAAGTCCACCAGAGGCCCATGTCCGGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGATGATCTGCCATGCTTGTCCAAGTCCACCAGAGGCCCATGTCCGGT  696

seq1  AGCTTGCGCATGGGTTCCCCTCTACCTTCCTCTTGACTGACTTGCTCTCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGCGCATGGGTTCCCCTCTACCTTCCTCTTGACTGACTTGCTCTCC  746

seq1  CCTGCTAATATATAACGAAATGCAATTATGAGTTTAACAGATTCTCTGAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTAATATATAACGAAATGCAATTATGAGTTTAACAGATTCTCTGAG  796

seq1  TCTTATAAATCCTTGTAGCAAATCACTGACTTTTTCCTAAAACTCCATCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATAAATCCTTGTAGCAAATCACTGACTTTTTCCTAAAACTCCATCT  846

seq1  CAGTCTTGCAGCTCCTGTCATTTTAAATTAACATAATAAACCCTGGGCAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTGCAGCTCCTGTCATTTTAAATTAACATAATAAACCCTGGGCAT  896

seq1  TAGTGTACTGAGCAGATTTCCTGCAGATCAACATAAAGATGAACTTTCAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTACTGAGCAGATTTCCTGCAGATCAACATAAAGATGAACTTTCAT  946

seq1  AAATTAATGCTGTTTAGATGAATTAATAATTTCATAGAATTC  991
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAATGCTGTTTAGATGAATTAATAATTTCATAGAATTC  988

seq1: chr3_120716782_120716974
seq2: B6Ng01-340I09.g_65_257

seq1  GAATTCACTGGAGGAGATATAAAGAAACCACCAGATAAGGCTTTATTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGGAGGAGATATAAAGAAACCACCAGATAAGGCTTTATTCTC  50

seq1  ATTTTGTGCCTTCAACCTGTAATCCACTCTCTAACCCTCACCTGAGCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTGCCTTCAACCTGTAATCCACTCTCTAACCCTCACCTGAGCAAG  100

seq1  AACACACTCTCCCATGAGAAGAATTCCAGCTTACCTTCTCTGACAATGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACTCTCCCATGAGAAGAATTCCAGCTTACCTTCTCTGACAATGCA  150

seq1  GTTTATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  193
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  193