BAC Information

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BAC

Clone NameB6Ng01-341I04
Chromosome3 (Build37)
Map Location 124,515,012 - 124,516,143
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043333, EG668809, Tram1l1, LOC100043740, 1700006A11Rik, 1700003H04Rik, LOC668817
Downstream geneLOC668820, Ndst4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341I04.bB6Ng01-341I04.g
ACCGA124872GA124873
length1,124967
definitionB6Ng01-341I04.b B6Ng01-341I04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcataattcttgccaaagcccactatcttttcttcttccatcatag
ataatactttgttggttagtttttgttgttaatgtttttcatttgtttgt
tatgtttttgttttctgtttttctttttgtacttcttttcattggttgtt
ttgagacaaggattcaccatgtagactggctattctagactgacccatca
tgttgggcaagctggcctctgtctataaagtgatgggtttaaaagcatgt
gctaaaaagtgttgcacagacactattctatattataaatcttctaaatt
ataatttgtccacttgcttttcttgtgaacatttaaaaatgacaaaatat
ttaaatataagtaaattcagtgtttcattttttgcattattatataaata
aatttagatgaagcaaaacattgtgtccctaggtttcaaaacttttatag
caggctatttaaccagttgtgtctgtggctaagatacatttctttgtcct
aaataaatttttttcaatgaaagaaaggcattactttgcaggaatttcag
ttagtaacaggacttcaaattaatacttattttttagcttgtaaaacata
gttttataagattttaattaagacttgtttattttacaatagcataatat
gtgcacataaaataattacacatatagccatatgaagcatatatattgaa
catcatgatgtattgctggaacacagtcaaagaatggagttgagtgagat
gactgagtgcttgtgagaaaactccaggaagacaggagacttggtacttg
agtttcttcagaacacagatttgttcttggaatgagtttttgtacttctc
tcagtgtagtggataggtgtgagtttacttcagctgttgttactcatagc
cctctgtgggaaaaaaaaacaaaaacaaacaaaaacaacaaacaaacaaa
aaaaaaaaaaaaaccaacccatggtttgtctcatgccgctgtccttgtga
ttgaatatcttattaatgtgactcctgtttactgtccagtatattgtctg
atggtactgaatacattggtctccattttttggcacagctcttccgaatc
cacactgctacactaggagcaaaa

gaattccctgagacgaaattactaaccaagcagcatacaagggctggtca
gaggtccctggtacatatatagctgaggactgtattgtctggcctcagtc
agagaagatgtaccaaattcttgagagacttgaggctccagggaaggggg
aggtctagtgagggaggaaggagaaacccttcagaggcaagaaggaggag
gaatgagatgagcaactgtgggaggatggacaaggatgaggatgacggga
atgtaaattaataaaataaaaaaaaaaaaaagaaaaagaaagaaagtaaa
agcaaagtaaggaaggctctactactacctgagcacctgatttgcatttc
ccctatgactaaggacattgaacatttatttaacatttatttattattat
tattatttattaacatttatctcagccattaaagattcttctcttgagca
caatctgtttagctctttaccctggtatttagttggaatatttggtttgt
tggtgtctaacttcttgatttctttatatattttggatattagccctctg
ttgaatgcaaggttgttgaagatcttttcccattctgtagactgctactt
ttttctattaatgttgtcctttgccttacaaaaccttttcaatttcatga
ggtcctattcatcaattgtttttcttgatgtctgagccattggtggtctg
ttcaggaagttgttttcctgtaacaactgtttcctgtgttcaaggctact
caccacattctgttctattagatttaatatatccaatgttatgttggggt
ctttgatatacttgggatttgagttctgtgcaagtgataaatatggatct
attttcactctttctatatgcagacactccgacaatacaatctattgtaa
gtttttttttttcttttaaactgaatgcttttgacttctggccagaatcc
ggtgtctgtaggtctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_124515012_124516143
seq2: B6Ng01-341I04.b_45_1168

seq1  GAATTCATAATTCTTGCCAAAGCCCACTATCTTTTCTTCTTCCATCATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAATTCTTGCCAAAGCCCACTATCTTTTCTTCTTCCATCATAG  50

seq1  ATAATACTTTGTTGGTTAGTTTTTGTTGTTAATGTTTTTCATTTGTTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATACTTTGTTGGTTAGTTTTTGTTGTTAATGTTTTTCATTTGTTTGT  100

seq1  TATGTTTTTGTTTTCTGTTTTTCTTTTTGTACTTCTTTTCATTGGTTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTTTGTTTTCTGTTTTTCTTTTTGTACTTCTTTTCATTGGTTGTT  150

seq1  TTGAGACAAGGATTCACCATGTAGACTGGCTATTCTAGACTGACCCATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGACAAGGATTCACCATGTAGACTGGCTATTCTAGACTGACCCATCA  200

seq1  TGTTGGGCAAGCTGGCCTCTGTCTATAAAGTGATGGGTTTAAAAGCATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGGCAAGCTGGCCTCTGTCTATAAAGTGATGGGTTTAAAAGCATGT  250

seq1  GCTAAAAAGTGTTGCACAGACACTATTCTATATTATAAATCTTCTAAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAAAGTGTTGCACAGACACTATTCTATATTATAAATCTTCTAAATT  300

seq1  ATAATTTGTCCACTTGCTTTTCTTGTGAACATTTAAAAATGACAAAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTGTCCACTTGCTTTTCTTGTGAACATTTAAAAATGACAAAATAT  350

seq1  TTAAATATAAGTAAATTCAGTGTTTCATTTTTTGCATTATTATATAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATATAAGTAAATTCAGTGTTTCATTTTTTGCATTATTATATAAATA  400

seq1  AATTTAGATGAAGCAAAACATTGTGTCCCTAGGTTTCAAAACTTTTATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGATGAAGCAAAACATTGTGTCCCTAGGTTTCAAAACTTTTATAG  450

seq1  CAGGCTATTTAACCAGTTGTGTCTGTGGCTAAGATACATTTCTTTGTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTATTTAACCAGTTGTGTCTGTGGCTAAGATACATTTCTTTGTCCT  500

seq1  AAATAAATTTTTTTCAATGAAAGAAAGGCATTACTTTGCAGGAATTTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATTTTTTTCAATGAAAGAAAGGCATTACTTTGCAGGAATTTCAG  550

seq1  TTAGTAACAGGACTTCAAATTAATACTTATTTTTTAGCTTGTAAAACATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAACAGGACTTCAAATTAATACTTATTTTTTAGCTTGTAAAACATA  600

seq1  GTTTTATAAGATTTTAATTAAGACTTGTTTATTTTACAATAGCATAATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATAAGATTTTAATTAAGACTTGTTTATTTTACAATAGCATAATAT  650

seq1  GTGCACATAAAATAATTACACATATAGCCATATGAAGCATATATATTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACATAAAATAATTACACATATAGCCATATGAAGCATATATATTGAA  700

seq1  CATCATGATGTATTGCTGGAACACAGTCAAAGAATGGAGTTGAGTGAGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATGATGTATTGCTGGAACACAGTCAAAGAATGGAGTTGAGTGAGAT  750

seq1  GACTGAGTGCTTGTGAGAAAACTCCAGGAAGACAGGAGACTTGGTACTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAGTGCTTGTGAGAAAACTCCAGGAAGACAGGAGACTTGGTACTTG  800

seq1  AGTTTCTTCAGAACACAGATTTGTTCTTGGAATGAGTTTTTGTACTTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTTCAGAACACAGATTTGTTCTTGGAATGAGTTTTTGTACTTCTC  850

seq1  TCAGGTGTAGTGGATAGGTGTGAGTTTACTTCAGCTGTTGTTACTCATAG  900
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCA-GTGTAGTGGATAGGTGTGAGTTTACTTCAGCTGTTGTTACTCATAG  899

seq1  CCCTCTGTGGAAAAAAAAACAAAAAACAAAACAAAAAACAAAACAAAACA  950
      |||||||||| ||||||||  |||||| ||||||||   | ||||||   
seq2  CCCTCTGTGGGAAAAAAAAACAAAAAC-AAACAAAA---ACAACAAA--C  943

seq1  AAACAAAAAAAAAAAAAAAACAAACCCATGGTTTGGTCTCATGCGGCTTG  1000
      ||||||||||||||||||||| |||||||||||| ||||||||| || ||
seq2  AAACAAAAAAAAAAAAAAAACCAACCCATGGTTT-GTCTCATGCCGC-TG  991

seq1  TCCTTGTGATTGAATATCTTATTAATGTGACTCCTGTTAACTGTCCAAGT  1050
      |||||||||||||||||||||||||||||||||||||| ||||||| |||
seq2  TCCTTGTGATTGAATATCTTATTAATGTGACTCCTGTTTACTGTCC-AGT  1040

seq1  ATAATTGTCTGAT-GTTCTGAATACATTTGGTCT-CATTTTTTGGCACAG  1098
      || |||||||||| || ||||||||| ||||||| |||||||||||||||
seq2  AT-ATTGTCTGATGGTACTGAATACA-TTGGTCTCCATTTTTTGGCACAG  1088

seq1  CTCTTCCAGATTCACACTGC-CTACTA-GAGCAAAA  1132
      |||||||  || ||||||||   |||| ||||||||
seq2  CTCTTCCGAATCCACACTGCTACACTAGGAGCAAAA  1124


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