BAC Information

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BAC

Clone NameB6Ng01-341L16
Chromosome3 (Build37)
Map Location 125,092,324 - 125,093,495
singlet/doubletsinglet
Overlap genenone
Upstream gene1700006A11Rik, 1700003H04Rik, LOC668817, LOC668820
Downstream geneNdst4, Ugt8a, Arsj
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341L16.bB6Ng01-341L16.g
ACCGA125028GA125029
length1,154988
definitionB6Ng01-341L16.b B6Ng01-341L16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccactattcctcattctattgatctcaggcaataacagaatggtt
aaagacatattttaacattggaaacatctacagagtctacagacaaaagt
tacaaagaacttgaatatgtatatacgccttccgcagatagtaaaatgtt
gctgactaaatgggcacagttgtcattttattgattgatgatcaatatgg
aaattggtagggtagggcccatcccaccatcagctgttccacccatagcc
aggtggtcctgggttaatatacagaaagcaaggtgagctgagagagccat
gggaagcaagccagtaagcagctactttaagttggggtgtttatcacaac
aaaaaccaatctacaatagcaattctggtcatgaataggactacatttat
tatagggaagctattatttgtctgtctgtctgtctgtctatctatcatct
atctctgtgtctatctatctatctatatatctatctattaatctatatac
ctacctatttatatgtttgtatggtgttctgttctgcctttgtggctcta
tattgaacaaagaattacattggctactgacagccaatttgaaaaataac
aatagtattgtactgactataaaaatgctccattaaaaataacagaagaa
aatttcagcgattacattgaggaattgatttagtgtgtttatatttagag
ttccatagatatatcaagatcatatctctacatatcttttgtctttaagg
cagaaaaggaaattgtataaataaattgtatacatgcaattataattaat
tgcatagtctatgtacttaaaataaaaatctcagtgtaatatcaatggac
tcaattccccaataaaaagacatagactaacagactggctacacaaacag
gacccaacattctgctgcttacaggaaacccatctcaggaaaaagacaga
cactacctcagagtaaaagctggaaaacaattttccaagcaaatggactg
aagaacaagctggagtagccattttaatatcggataaatcgactcaccca
aagttatcaaaaagacagaagacacttcatacctcatcaaagtaatcctc
agaggactcttcatctggaattcctacacacccaatgcaggcagccacat
tcat

gaattctcacctgaggaataccgaatggcagagaagcacatgaaaaaatg
ttcaacatccttaatcatcatgaaatgcaaatcaaaacaacactgagatt
ccacttcactccagtcagaatggctaagatcaaaaacacaggtgacagca
gatgctggtgaggatgtggagaaaggggaacactcctccattgttggtgg
gattgcaagcttgtataaccactctggaaatcagtctggtggttcctcag
aaaattggacatagtactaccggaggatcccgcaatacctctcctgggca
tatatccagatgtcccaaccagtaagaagaatacatgctccactatgttc
atagcagccttgtttataatagccagaagctggaaagaacccagatgccc
ctcaacagaggaatggatacagaaaatgtggtacatctacacaatggaat
actactcagctattaaaaaaatgaatttatgaaattcctaggcaaatgga
tggacctggagggtatcatcctgagtgaagtaacccaatcacaaaggaac
tcacacaatatgtactcactgataagtagataatagcccagaaacttagg
atacccaagatataagatacaacttgccaaacacgtgaaattcaagaaga
atgaagaccaaagtgtggacactttaccctttcttagaaatgggaacaaa
actcccatagaaggagttacagagacaaaatttggagctgtgacgaaagg
atggaccatctagttattgccatatgcaaggatccatcccataatcagct
tccaaatgctgacaccattgcatacactagcaagattttgctgaaaggac
ccagatatagctgtctcttgtgagactatgccggggccctagcaaacaca
gaagttggatgctcacagtcagctattggatgggtcacacggcccctaat
ggaggagctagagaaattacccaagagctaaagggaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_125092324_125093495
seq2: B6Ng01-341L16.b_51_1204

seq1  GAATTCCACTATTCCTCATTCTATTGATCTCAGGCAATAACAGAATGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTATTCCTCATTCTATTGATCTCAGGCAATAACAGAATGGTT  50

seq1  AAAGACATATTTTAACATTGGAAACATCTACAGAGTCTACAGACAAAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACATATTTTAACATTGGAAACATCTACAGAGTCTACAGACAAAAGT  100

seq1  TACAAAGAACTTGAATATGTATATACGCCTTCCGCAGATAGTAAAATGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGAACTTGAATATGTATATACGCCTTCCGCAGATAGTAAAATGTT  150

seq1  GCTGACTAAATGGGCACAGTTGTCATTTTATTGATTGATGATCAATATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACTAAATGGGCACAGTTGTCATTTTATTGATTGATGATCAATATGG  200

seq1  AAATTGGTAGGGTAGGGCCCATCCCACCATCAGCTGTTCCACCCATAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGGTAGGGTAGGGCCCATCCCACCATCAGCTGTTCCACCCATAGCC  250

seq1  AGGTGGTCCTGGGTTAATATACAGAAAGCAAGGTGAGCTGAGAGAGCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGTCCTGGGTTAATATACAGAAAGCAAGGTGAGCTGAGAGAGCCAT  300

seq1  GGGAAGCAAGCCAGTAAGCAGCTACTTTAAGTTGGGGTGTTTATCACAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGCAAGCCAGTAAGCAGCTACTTTAAGTTGGGGTGTTTATCACAAC  350

seq1  AAAAACCAATCTACAATAGCAATTCTGGTCATGAATAGGACTACATTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCAATCTACAATAGCAATTCTGGTCATGAATAGGACTACATTTAT  400

seq1  TATAGGGAAGCTATTATTTGTCTGTCTGTCTGTCTGTCTATCTATCATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGGAAGCTATTATTTGTCTGTCTGTCTGTCTGTCTATCTATCATCT  450

seq1  ATCTCTGTGTCTATCTATCTATCTATATATCTATCTATTAATCTATATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGTGTCTATCTATCTATCTATATATCTATCTATTAATCTATATAC  500

seq1  CTACCTATTTATATGTTTGTATGGTGTTCTGTTCTGCCTTTGTGGCTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTATTTATATGTTTGTATGGTGTTCTGTTCTGCCTTTGTGGCTCTA  550

seq1  TATTGAACAAAGAATTACATTGGCTACTGACAGCCAATTTGAAAAATAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAACAAAGAATTACATTGGCTACTGACAGCCAATTTGAAAAATAAC  600

seq1  AATAGTATTGTACTGACTATAAAAATGCTCCATTAAAAATAACAGAAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTATTGTACTGACTATAAAAATGCTCCATTAAAAATAACAGAAGAA  650

seq1  AATTTCAGCGATTACATTGAGGAATTGATTTAGTGTGTTTATATTTAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCAGCGATTACATTGAGGAATTGATTTAGTGTGTTTATATTTAGAG  700

seq1  TTCCATAGATATATCAAGATCATATCTCTACATATCTTTTGTCTTTAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATAGATATATCAAGATCATATCTCTACATATCTTTTGTCTTTAAGG  750

seq1  CAGAAAAGGAAATTGTATAAATAAATTGTATACATGCAATTATAATTAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAGGAAATTGTATAAATAAATTGTATACATGCAATTATAATTAAT  800

seq1  TGCATAGTCTATGTACTTAAAATAAAAATCTCAGTGTAATATCAATGGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAGTCTATGTACTTAAAATAAAAATCTCAGTGTAATATCAATGGAC  850

seq1  TCAATTCCCCAATAAAAAGACATAGACTAACAGACTGGCTACACAAACAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTCCCCAATAAAAAGACATAGACTAACAGACTGGCTACACAAACAG  900

seq1  GACCCAACATTCTGCTGCTTACAGGAAACCCATCTCAGGGAAAAAGACAG  950
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GACCCAACATTCTGCTGCTTACAGGAAACCCATCTCA-GGAAAAAGACAG  949

seq1  ACACTACCTCAGAGTAAAAGGCTGGAAAACAATTTTCCAAGCAAATGGAC  1000
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ACACTACCTCAGAGTAAAA-GCTGGAAAACAATTTTCCAAGCAAATGGAC  998

seq1  TGAAGAAACAAGCTGGAGTAGCCATTTTAATATCGGATAAAATCGACTTC  1050
      ||||| |||||||||||||||||||||||||||||||| |||||||||  
seq2  TGAAG-AACAAGCTGGAGTAGCCATTTTAATATCGGAT-AAATCGACT--  1044

seq1  CAACCCAAAGTTATCAAAAAAGACAAGGAGGGACACTTCATA-CTCATCA  1099
        ||||||||||||| |||||||||  ||  ||||||||||| |||||||
seq2  -CACCCAAAGTTATC-AAAAAGACA--GA-AGACACTTCATACCTCATCA  1089

seq1  AAGGTAAAATCCTCCAAGAGGAACTCTCAATTCTGAATATCTACACACCA  1149
      |||    |||||||  ||||| |||||  ||   ||||  ||||||||| 
seq2  AAG---TAATCCTC--AGAGG-ACTCTTCATCTGGAATTCCTACACACCC  1133

seq1  AATGCAAGGGCAGCCACATTCAT  1172
      ||||||  |||||||||||||||
seq2  AATGCA--GGCAGCCACATTCAT  1154


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