BAC Information

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BAC

Clone NameB6Ng01-343B04
Chromosome3 (Build37)
Map Location 71,230,739 - 71,231,741
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC670542, EG625901, EG667377
Downstream geneLOC667385, LOC100041459
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-343B04.bB6Ng01-343B04.g
ACCGA125950GA125951
length1,0041,209
definitionB6Ng01-343B04.b B6Ng01-343B04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatggattcttgaacttcttagcttttcaaaaaaaaaaaaaata
cagagcatttcggatgtcaaaactactagctaatttttgaattaaaacaa
actaccttaatgaatatttgttaatatttctcctataaacctaagtaatt
tcagagaactttgttataagtctgtttgtataactatggagtgtgaagag
aatttggccattgtgaaaacaagaagaaattattcaggtataactgtttt
caaataaatacaatatttctaggatgtttttaaaaacatgaacatttcca
atgtattgctctgatttccaagagccatagaagcaaatcggcactgtcca
ggtaaattgaacaatttttcatttcataattcagggagctgaagtgcagt
ttacaagtggtgcaagacatttctggctcagctgtcacttctcagtttga
caatagcagtctcactacttatagttgattggaacagtcaattactaatc
acaaacatgtggaggtaggacaaataatttttcccatatgaactcaaatc
aggtgtgattatatacaagtgatacacaaggagaagacaactctgatccc
agcatgggtaataaccaggattctggaagccacatctcgagctgaggcac
tattgtcagtcatatctactgagggagggaattctgagaagctaccactg
ctccagaagatggaccacacaaattcaactacaggtaatactacatggat
ttagtgtgtatttaaaaagcatggggaaaaaatgaagctgggagaacttt
ttgatagggtgaaagggaaaaaataaagaataaaatggaaggtttcaaag
atcagagcacatcacataaatgtgctcaattctcaattgatgagtataat
taaaaatgtacatagtttacacgttttcttgcattctttgtgttgatgat
taactttgttttttgttttttgtttttgtttgtttttgtttggtgggggg
gggt

gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcatggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagttataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccgtagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatta
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaaagtagccaggagctaaagggatctgcaccctat
aggtggaacaacatatgactaccagtaccccggagcttcttgactctagc
tgcatattatatcaaaagatggctagtcggcatccactgaatgaggccca
tgacttgcaaactttaatatgcccagtacaggcacatcagcgcaaaggga
atggctggcagagggaaggggggttgagttaaatgatgtacttctgtagc
tacgtcact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_71230739_71231741
seq2: B6Ng01-343B04.b_49_1052

seq1  GAATTCAATGGATTCTTGAACTTCTTAGCTTTTCAAAAAAAAAAAAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGGATTCTTGAACTTCTTAGCTTTTCAAAAAAAAAAAAAATA  50

seq1  CAGAGCATTTCGGATGTCAAAACTACTAGCTAATTTTTGAATTAAAACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCATTTCGGATGTCAAAACTACTAGCTAATTTTTGAATTAAAACAA  100

seq1  ACTACCTTAATGAATATTTGTTAATATTTCTCCTATAAACCTAAGTAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCTTAATGAATATTTGTTAATATTTCTCCTATAAACCTAAGTAATT  150

seq1  TCAGAGAACTTTGTTATAAGTCTGTTTGTATAACTATGGAGTGTGAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGAACTTTGTTATAAGTCTGTTTGTATAACTATGGAGTGTGAAGAG  200

seq1  AATTTGGCCATTGTGAAAACAAGAAGAAATTATTCAGGTATAACTGTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGGCCATTGTGAAAACAAGAAGAAATTATTCAGGTATAACTGTTTT  250

seq1  CAAATAAATACAATATTTCTAGGATGTTTTTAAAAACATGAACATTTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAATACAATATTTCTAGGATGTTTTTAAAAACATGAACATTTCCA  300

seq1  ATGTATTGCTCTGATTTCCAAGAGCCATAGAAGCAAATCGGCACTGTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTGCTCTGATTTCCAAGAGCCATAGAAGCAAATCGGCACTGTCCA  350

seq1  GGTAAATTGAACAATTTTTCATTTCATAATTCAGGGAGCTGAAGTGCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAATTGAACAATTTTTCATTTCATAATTCAGGGAGCTGAAGTGCAGT  400

seq1  TTACAAGTGGTGCAAGACATTTCTGGCTCAGCTGTCACTTCTCAGTTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAGTGGTGCAAGACATTTCTGGCTCAGCTGTCACTTCTCAGTTTGA  450

seq1  CAATAGCAGTCTCACTACTTATAGTTGATTGGAACAGTCAATTACTAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGCAGTCTCACTACTTATAGTTGATTGGAACAGTCAATTACTAATC  500

seq1  ACAAACATGTGGAGGTAGGACAAATAATTTTTCCCATATGAACTCAAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACATGTGGAGGTAGGACAAATAATTTTTCCCATATGAACTCAAATC  550

seq1  AGGTGTGATTATATACAAGTGATACACAAGGAGAAGACAACTCTGATCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTGATTATATACAAGTGATACACAAGGAGAAGACAACTCTGATCCC  600

seq1  AGCATGGGTAATAACCAGGATTCTGGAAGCCACATCTCGAGCTGAGGCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGGGTAATAACCAGGATTCTGGAAGCCACATCTCGAGCTGAGGCAC  650

seq1  TATTGTCAGTCATATCTACTGAGGGAGGGAATTCTGAGAAGCTACCACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTCAGTCATATCTACTGAGGGAGGGAATTCTGAGAAGCTACCACTG  700

seq1  CTCCAGAAGATGGACCACACAAATTCAACTACAGGTAATACTACATGGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGAAGATGGACCACACAAATTCAACTACAGGTAATACTACATGGAT  750

seq1  TTAGTGTGTATTTAAAAAGCATGGGGAAAAAATGAAGCTGGGAGAACTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTGTATTTAAAAAGCATGGGGAAAAAATGAAGCTGGGAGAACTTT  800

seq1  TTGATAGGGTGAAAGGGAAAAAATAAAGAATAAAATGGAAGGTTTCAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAGGGTGAAAGGGAAAAAATAAAGAATAAAATGGAAGGTTTCAAAG  850

seq1  ATCAGAGCACATCACATAAATGTGCTCAATTCTCAATTGATGAGTATAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGCACATCACATAAATGTGCTCAATTCTCAATTGATGAGTATAAT  900

seq1  TAAAAATGTACATAGTTTACACGTTTTCTTGCATTCTTTGTGTTGATGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATGTACATAGTTTACACGTTTTCTTGCATTCTTTGTGTTGATGAT  950

seq1  TAACTTTGTTTTTTGTTTTTTGTTTTTGTTTGTTTTTTGTTT--TGTGGG  998
      |||||||||||||||||||||||||||||||| |||||||||  || |||
seq2  TAACTTTGTTTTTTGTTTTTTGTTTTTGTTTG-TTTTTGTTTGGTGGGGG  999

seq1  GGGGT  1003
      |||||
seq2  GGGGT  1004


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