BAC Information

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BAC

Clone NameB6Ng01-344N07
Chromosome3 (Build37)6 (Build37)
Map Location 120,718,624 - 120,718,762129,842,596 - 129,843,615
singlet/doubletsingletsinglet
Overlap genenone
Upstream genenone
Downstream gene2510027J23Rik, LOC435752, Tmem56, LOC668778, LOC668780, Alg14, Ppia-ps3_1234.1, Cnn3, Slc44a3, A730020M07Rik, 4930432M17Rik, F3, Abcd3, LOC100043298, Arhgap29
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344N07.bB6Ng01-344N07.g
ACCGA127215GA127216
length3351,074
definitionB6Ng01-344N07.b B6Ng01-344N07.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(120,718,624 - 120,718,762)(129,842,596 - 129,843,615)
sequence
atttatttaaacatttgtatattgttttcctgtaatgtgaacaaaactgt
agagactggtttctatagaaacacttcttcttcttcttcttcttcttctt
cttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttct
tcttcttcttctacttcttcttcttcttcttcttcttcttcttcttcttt
tttcatttacatttgttttatttatttatttttttaattaagtatttatt
tcgtttacatttccaatgctttctcaaaattccccaccatgcttccccac
tcacccactcccatttcttggccctggcgttcccc

gaattctttgtttacctctgcatcccatttttaatggttatttggttttc
cagagtctaacttcttgaattcttgtatatattcgatattaggtctctat
cagatttagtgttggtaaagatcttttcccaatctgttggttgccttttt
gtcttattgacagtgtcttttgccttacagaagctttacaattttatgag
gtcttatttgacaacacttgatgttatcacatgcacagttggtgttctgt
tcaggatttttttctgctgtgtacttgtatttgagagctttcctcatttt
ctcttctattattttcaacatcccttcatggtaaaaatctttgaaagatt
aggactccaaggtccatacagaaacatagtaaaaacaataaacatcaaat
cagtcaccaacatcaaactaaatggaaagaaacttgaagcaatcccacta
aaatcaggaactagacaaagctgcccactctttctctacctatttaatat
agtacttgaatcccaagccagagcaattagacaacaaaaagagattaaag
ggatacaaattgcactataaactgttaaggatcacaatatacaattgtta
actgtgtagcatgtgcagaattaataaatccccatatatgttttcttaga
gttactagcttgaaaacaaatggtattcatacaccacttcaagttccata
tccccaacatagttagtcacatttaaggataccctcactgagtcttgggt
gtctgccttatctcaggtctctgtctcattctggacactaaaccaaacac
acttatgagggaatggattatttcattttacatgttactactgaatgtta
aaggaatatggaataagaatttaggtgaaggctcaaagaagaaaccacag
gggaactattttttctgacttgaaatatagctcagtttagctattttcat
ttctttcatttcttccttttttcatatttatttcactatcacactctctc
tctcctctattcccagctcacataccccttccacattaacccttgcattt
cccagagaatgcaaaccctccatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_120718624_120718762
seq2: B6Ng01-344N07.b_268_387

seq1  TTTTATTTATTTATTTTTTAATATATTTTTATTACGTATTTTCCTCAATT  50
      ||||||||||||||||         |||| |||| ||||||   ||  ||
seq2  TTTTATTTATTTATTT---------TTTTAATTAAGTATTTATTTCGTTT  41

seq1  ACATTTCCAATGCTATCCCAAAAGTCACCCATACCCTCCCCCTCACTTCC  100
      |||||||||||||| || ||||| || ||||         ||   |||||
seq2  ACATTTCCAATGCTTTCTCAAAATTC-CCCA---------CCATGCTTCC  81

seq1  CTACCCACCCATTCCCACTTTTTGGCCCTGGTGTTCCCC  139
      | || |||||| ||||| || |||||||||| |||||||
seq2  CCACTCACCCACTCCCATTTCTTGGCCCTGGCGTTCCCC  120


seq1: chr6_129842596_129843615
seq2: B6Ng01-344N07.g_133_1142

seq1  TTGAATTCTTGTATATATTCGATATTAGGTCTCTATCAGATTTAGTGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTCTTGTATATATTCGATATTAGGTCTCTATCAGATTTAGTGTTG  50

seq1  GTAAAGATCTTTTCCCAATCTGTTGGTTGCCTTTTTGTCTTATTGACAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGATCTTTTCCCAATCTGTTGGTTGCCTTTTTGTCTTATTGACAGT  100

seq1  GTCTTTTGCCTTACAGAAGCTTTACAATTTTATGAGGTCTTATTTGACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTGCCTTACAGAAGCTTTACAATTTTATGAGGTCTTATTTGACAA  150

seq1  CACTTGATGTTATCACATGCACAGTTGGTGTTCTGTTCAGGATTTTTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGATGTTATCACATGCACAGTTGGTGTTCTGTTCAGGATTTTTTTC  200

seq1  TGCTGTGTACTTGTATTTGAGAGCTTTCCTCATTTTCTCTTCTATTATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGTACTTGTATTTGAGAGCTTTCCTCATTTTCTCTTCTATTATTT  250

seq1  TCAACATCCCTTCATGGTAAAAATCTTTGAAAGATTAGGACTCCAAGGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACATCCCTTCATGGTAAAAATCTTTGAAAGATTAGGACTCCAAGGTC  300

seq1  CATACAGAAACATAGTAAAAACAATAAACATCAAATCAGTCACCAACATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAGAAACATAGTAAAAACAATAAACATCAAATCAGTCACCAACATC  350

seq1  AAACTAAATGGAAAGAAACTTGAAGCAATCCCACTAAAATCAGGAACTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAATGGAAAGAAACTTGAAGCAATCCCACTAAAATCAGGAACTAG  400

seq1  ACAAAGCTGCCCACTCTTTCTCTACCTATTTAATATAGTACTTGAATCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGCTGCCCACTCTTTCTCTACCTATTTAATATAGTACTTGAATCCC  450

seq1  AAGCCAGAGCAATTAGACAACAAAAAGAGATTAAAGGGATACAAATTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAGAGCAATTAGACAACAAAAAGAGATTAAAGGGATACAAATTGCA  500

seq1  CTATAAACTGTTAAGGATCACAATATACAATTGTTAACTGTGTAGCATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAACTGTTAAGGATCACAATATACAATTGTTAACTGTGTAGCATGT  550

seq1  GCAGAATTAATAAATCCCCATATATGTTTTCTTAGAGTTACTAGCTTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAATTAATAAATCCCCATATATGTTTTCTTAGAGTTACTAGCTTGAA  600

seq1  AACAAATGGTATTCATACACCACTTCAAGTTCCATATCCCCAACATAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATGGTATTCATACACCACTTCAAGTTCCATATCCCCAACATAGTT  650

seq1  AGTCACATTTAAGGATACCCTCACTGAGTCTTGGGTGTCTGCCTTATCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACATTTAAGGATACCCTCACTGAGTCTTGGGTGTCTGCCTTATCTC  700

seq1  AGGTCTCTGTCTCATTCTGGACACTAAACCAAACACACTTATGAGGGAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTCTGTCTCATTCTGGACACTAAACCAAACACACTTATGAGGGAAT  750

seq1  GGATTATTTCATTTTACATGTTACTACTGAATGTTAAAGGAATATGGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTATTTCATTTTACATGTTACTACTGAATGTTAAAGGAATATGGAAT  800

seq1  AAGAATTTAGGTGAAGGCTCAAAGAAGAAACCACAGGGGAACTA-TTTTT  849
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AAGAATTTAGGTGAAGGCTCAAAGAAGAAACCACAGGGGAACTATTTTTT  850

seq1  CTGACTTGAAATATAGCTCAGGTTTAGCTATTTTCATTTCTTTCATTTCT  899
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTGACTTGAAATATAGCTCA-GTTTAGCTATTTTCATTTCTTTCATTTCT  899

seq1  TCCTTTTTTCATAATTTATTTCACTATTCACCACTCTCTCCTCTCCTCCT  949
      |||||||||||| ||||||||||||| ||| |||||||| ||||||| ||
seq2  TCCTTTTTTCAT-ATTTATTTCACTA-TCA-CACTCTCT-CTCTCCT-CT  944

seq1  ATTCCCAGCCTCACATACCCCTTCCACATTAACCCTTTGCCATTTTCTCA  999
      |||||||| |||||||||||||||||||||||||| ||||   |||| ||
seq2  ATTCCCAG-CTCACATACCCCTTCCACATTAACCC-TTGC--ATTTCCCA  990

seq1  GAGAAGGGAAAACCCTCCATG  1020
      |||||  | ||||||||||||
seq2  GAGAA-TGCAAACCCTCCATG  1010


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