BAC Information

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BAC

Clone NameB6Ng01-345I21
Chromosome3 (Build37)
Map Location 93,758,093 - 93,758,291
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC630994, 2310001H18Rik, Lce3f, Crct1, Lce1m, EG229571, Crnn, EG229574, EG668300, LOC668304, Flg, LOC100042701, Hrnr, Rptn, EG383891, Tchh, Tchhl1, S100a11, S100a10, EG433623, Tdpoz2, Tdpoz1, LOC668325, LOC545550, EG436563, Tdpoz4, Tdpoz3, EG668341, LOC668344, EG668346
Downstream geneTdpoz5, EG668353, EG668356, LOC668359, LOC100042761, LOC433624, LOC668367, LOC433625, LOC100043188, EG383977, EG245290, EG668385, EG212727, Them4, Them5, Gm659, Rorc, Lingo4, Tdrkh, Oaz3, Mrpl9, LOC668403, 2310007A19Rik, Tnrc4, Snx27, LOC100043228, EG668409, Tuft1, LOC100042793, BC021767, Selenbp2, LOC100042801, Cgn, Pogz, Psmb4, Selenbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-345I21.bB6Ng01-345I21.g
ACCGA127710GA127711
length941936
definitionB6Ng01-345I21.b B6Ng01-345I21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatatggagaaagaggaacactcttccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
gggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcat
gaattcatgaagttcttaggcaaatgcatgcaactagaaaatatcatcct
agccgggtgtggtggtgcacacctttaatcccagcacttgggagacgtaa
gcaggcagatttctgagttcgagaccagcctgatctacaaagtcaattcc
aggacagccagggctatacagagaaaccctgtcttgaaaaaccaaaaacc
aaaaaccaaaaaccaaaaaaaaaaaaataaaaataaaataaaaaaattaa
aaaaaaatcatcctgagtgaggtaacccaaatcacaaaagaacgcacatg
gtatgcactcactgataagtgaatattagcccagaagctcagaataccca
agatacaattcacagaccacatgaagctccaaaaagaggaagaccaaaga
gtgggtacttcagtccttcttagatatgggaacaaaatacccttgggagg
agatagagaaacaaagtgtggaacagagactaaggaaaggccatccagag
actgccccatctggggatccatcccatatacagtcaccaaaccagactct
attttggatgctaactagtgcttgttgacagtatcctgatatagctgtct
cctaagaggctctgccaatacctgacaaatatagaggtggatgctctcag
ccaaccattggactgagcacaagattcccaatggaggagctagagaatgg
actcaaggaactgaaggggtttgcagccccataggaggaacaacaatatg
aaccaacctgtatcctcagagcttccagggactaaaccaccatcccaaga
ttacacatggagggacccatggttccaactgcatttgtagcagaggatgg
ctttggcagtcaccaatgggaggagaggcccttgggtcctgtgaaggttc
aatttcccagtgtaggggaatgccaggtttcaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_93758093_93758291
seq2: B6Ng01-345I21.g_114_291

seq1  TAGCCGGGCATGGTGGCACACGCCTTTAATCCCAGCACTCGGGAGGCAGA  50
      ||||||||  ||||||  ||| ||||||||||||||||| ||||| |  |
seq2  TAGCCGGGTGTGGTGGTGCACACCTTTAATCCCAGCACTTGGGAGACGTA  50

seq1  GGCAGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGCTG  100
       ||||||||||||||||||||||| |||||||| |||||||||| |  | 
seq2  AGCAGGCAGATTTCTGAGTTCGAGACCAGCCTGATCTACAAAGTCAATTC  100

seq1  CAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAAACAAACAA  150
      ||||||||||||||||||||||||||||||||||| ||||||        
seq2  CAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTTGAAAAA--------  142

seq1  ACAAAAAAACCCCCCAAAAACCAAAAACCAAAAAACAACAACAAAAAAA  199
                   ||||||||||||||||||||| ||| || |||||||
seq2  -------------CCAAAAACCAAAAACCAAAAACCAAAAAAAAAAAAA  178