BAC Information

Click to search

BAC

Clone NameB6Ng01-345I24
Chromosome3 (Build37)
Map Location 125,694,210 - 125,694,931
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668820, Ndst4, Ugt8a
Downstream geneArsj, Camk2d, Ank2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-345I24.bB6Ng01-345I24.g
ACCGA127716GA127717
length941353
definitionB6Ng01-345I24.b B6Ng01-345I24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactagtccactagacctctctgaatgtcacatctcaatggtttt
tgtataccactgtcaaaaggctgttgatggtttgttagttttttcacagg
tgttagtcagacacactagaagtccttgctttgtgactttgggataaaaa
tgaaaaataataacaagatattgtattagtaaatttgcaagcgtgcaaca
atggtaacattttcacagaaaactgatgttttaagggacctgcagattga
gttccagagtggttataccaatttgccatcccaacatcaatggaggactg
tccctcttctttcacatcctcaccaacatgtgctgtcacctgaggttttg
atcttagccattctgattggcatatggtggaatctcacagtcgttttgac
ttgcgtttctctgatcactaaagactgtgcacatttctttaggtgcttct
cggccattcgagattcctctgttgtgaagtctcagtttagttctataccc
cattttttgattgggttgtttttttttttttttttttttttttttggtgg
ttagcttcttgagttctttacatattttggatattagccctctattgaac
gtggggttaatgtagattttttccaaatctgcaggttgccaatttgtgtt
attggctatgtcctttgccttactgaagctttccagtttcatgaggtcct
atttatcaattcccgatcttagcgcatgagccattagagttctgtttgag
aaatttccccatatgccaagaattcaaggttcttttcctctttctatttt
attagattcagtgtatctggttttatattgaggtccttgatccacttgga
cttgagctttgtgcaagtgacaaatatgggtctattttcattttttctac
atacagacagccagtttaaaccagcaccctttattgagatg

tttgtttagctctgtgccccattttttaatagtattatttaattttctga
gactatgccagtgcctagcaaatacagaagtggatgctcatagtcagcta
ttggatggaacacagggtccccaatggaggagctagagaaagtactcaag
gagctgaaggggtctgcaacctgatagttggaacaacaatatgaactaac
cagtacccccagagctcgtgtctctagctgcatatgtagcagaagatggc
ctagtcagacatcattgggaagagaggccccttggtgttgcaaaatttat
atgccccaatacatgggaatgccaggaccaagaagtgggagtgggtgggt
agg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_125694210_125694931
seq2: B6Ng01-345I24.b_47_768

seq1  GAATTCACTAGTCCACTAGACCTCTCTGAATGTCACATCTCAATGGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTAGTCCACTAGACCTCTCTGAATGTCACATCTCAATGGTTTT  50

seq1  TGTATACCACTGTCAAAAGGCTGTTGATGGTTTGTTAGTTTTTTCACAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATACCACTGTCAAAAGGCTGTTGATGGTTTGTTAGTTTTTTCACAGG  100

seq1  TGTTAGTCAGACACACTAGAAGTCCTTGCTTTGTGACTTTGGGATAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGTCAGACACACTAGAAGTCCTTGCTTTGTGACTTTGGGATAAAAA  150

seq1  TGAAAAATAATAACAAGATATTGTATTAGTAAATTTGCAAGCGTGCAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAATAATAACAAGATATTGTATTAGTAAATTTGCAAGCGTGCAACA  200

seq1  ATGGTAACATTTTCACAGAAAACTGATGTTTTAAGGGACCTGCAGATTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAACATTTTCACAGAAAACTGATGTTTTAAGGGACCTGCAGATTGA  250

seq1  GTTCCAGAGTGGTTATACCAATTTGCCATCCCAACATCAATGGAGGACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAGAGTGGTTATACCAATTTGCCATCCCAACATCAATGGAGGACTG  300

seq1  TCCCTCTTCTTTCACATCCTCACCAACATGTGCTGTCACCTGAGGTTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTTCTTTCACATCCTCACCAACATGTGCTGTCACCTGAGGTTTTG  350

seq1  ATCTTAGCCATTCTGATTGGCATATGGTGGAATCTCACAGTCGTTTTGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAGCCATTCTGATTGGCATATGGTGGAATCTCACAGTCGTTTTGAC  400

seq1  TTGCGTTTCTCTGATCACTAAAGACTGTGCACATTTCTTTAGGTGCTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCGTTTCTCTGATCACTAAAGACTGTGCACATTTCTTTAGGTGCTTCT  450

seq1  CGGCCATTCGAGATTCCTCTGTTGTGAAGTCTCAGTTTAGTTCTATACCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCATTCGAGATTCCTCTGTTGTGAAGTCTCAGTTTAGTTCTATACCC  500

seq1  CATTTTTTGATTGGGTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTTGATTGGGTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTGG  550

seq1  TTAGCTTCTTGAGTTCTTTACATATTTTGGATATTAGCCCTCTATTGAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTTCTTGAGTTCTTTACATATTTTGGATATTAGCCCTCTATTGAAC  600

seq1  GTGGGGTTAATGTAGATTTTTTCCAAATCTGCAGGTTGCCAATTTGTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGTTAATGTAGATTTTTTCCAAATCTGCAGGTTGCCAATTTGTGTT  650

seq1  ATTGGCTATGTCCTTTGCCTTACTGAAGCTTTCCAGTTTCATGAGGTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCTATGTCCTTTGCCTTACTGAAGCTTTCCAGTTTCATGAGGTCCT  700

seq1  ATTTATCAATTCCCGATCTTAG  722
      ||||||||||||||||||||||
seq2  ATTTATCAATTCCCGATCTTAG  722


| Home | SequenceCutter | Blast | Download |