BAC Information

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BAC

Clone NameB6Ng01-345N15
Chromosome3 (Build37)
Map Location 77,344,174 - 77,345,169
singlet/doubletsinglet
Overlap genenone
Upstream geneFstl5, LOC100041625, LOC100041635
Downstream geneDnmt3a-ps1, EG626461, LOC667526, LOC626479, LOC100041691
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-345N15.bB6Ng01-345N15.g
ACCGA127919GA127920
length1,1361,029
definitionB6Ng01-345N15.b B6Ng01-345N15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gccaatatcaaattaaatagagagatacttgaactaataccgctaaaatt
ggggacaagacaaggatgcccactctccccatatctattcactatagtac
ttgaagtactagctataagacaacaaaaagaggtcaaggggataaaaatt
gggaagaagaaataaagctatcactatttgaggatgatatggtagcatac
ttaagagatcacaaaaattctaccagagaacttctctagctgataaacaa
cttcaacaaagtacctggatacaaaattaacacaaataaatatgtagcct
tcctttataaaaaagataaacaggctgagaatgaaattagggaaacaaca
cgttttaccacagccacaaataatataaattatcttggggtaactctaac
gaaataagtgtacaatatataaaacaataacttcaagtctctcaagaaag
aaatcaaagatctcagaaaatggagagatcttccatgcttatggtctggt
agaattaataaaagtaataatggccatcctatcaaaggcagtctacaaat
tcaatgcaattcctatcaaaatcccaacacaattcttcaaacacagagga
aaagcagttctcaaatttatcaggataggaaataaaacccagaatagtgg
aaacaattcttaacaagaaaagaaaagctctgggaatcaccatcctggac
ctcaagctttactacagagcaatagtgataaaaacttcacggtactggta
cagagacagacacattgaacaatggaatagaattcaagacccagaaaacc
acacacttgcagacacttgacctctgacaaagaatccaaaaataatactg
tggaaaaaaagaaagtatcttcaacaaatggtgctgatctaactgtatct
ctgtatgtcgaaaagtgaaaatagaatcatgttgtcaccttgcacaaaag
ctcaaatccaagtggataaggacctcaacaataaagccagatacactgat
ctaataaaaaaaagaagtgggaaaagagccttgaaactcatgcaccagga
gaagttcttaaacagaaactaggtcatgcttagattcagatgatattggt
taccctccatgcaaacctgtgggaaaaggcctcctg

gaattccacattgtcaatgtcactcaggcttcctgctgtgatgtatagca
agcataagcagattaagtgtgttttctggtacatgtgcagaattttccag
aagatcttagtggtttttcttttcttctttcttttttcagtatagtcagt
gaaatacatccaggctttccaattttccaaacatgtttttttgggggtag
ggtggcatactccaatccacttagctgaacaaactgttgtagaaggaaat
cagttctcttcctcacaagttgaccttggacctacctcaacttatccagg
cattgaaatggaatttctaaccatggcattctctgttttcaggcttttga
aatcaaaccagacctttttggtttctggattgtagatagatgacacatga
accaatgcatcataaacctctatgcatcataaaactctatggcaaaagag
tagggcatgtttgctctttcttgtttgagggacattaattattataatct
taacaaagtaaaatcatgcttcaggagaatatacttataagtgtttatgt
ttggacattataatgtactttcattaattctctttccttccttcaatcta
cccatataccccatcttgtcctctttcaattccatttgtcctttttaaat
tatatatacataatatatattgtatatatatatatatatatatatatata
tatatatatatatatgctcagcatgcaaaatgtttgcttggttttgtatg
atacaaagggcttaccttcttaatattagataaccagtttgggagatctt
atattttactgcactcaatattttcataagctgcctgtaagtggccctga
tgtgcaattccacttacatggttatttcatttcctattgggtgtcatctt
tggttaagcaaccatacagaataatatttccatggggcaataaacctccc
tctgaacttttctaaggtaacaaaaaatttttttttctttttttctcaga
aaattgcaattcttttgcaattccttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_77344174_77345169
seq2: B6Ng01-345N15.g_68_1096

seq1  GAATTCCACATTGTCAATGTCACTCAGGCTTCCTGCTGTGATGTATAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACATTGTCAATGTCACTCAGGCTTCCTGCTGTGATGTATAGCA  50

seq1  AGCATAAGCAGATTAAGTGTGTTTTCTGGTACATGTGCAGAATTTTCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAAGCAGATTAAGTGTGTTTTCTGGTACATGTGCAGAATTTTCCAG  100

seq1  AAGATCTTAGTGGTTTTTCTTTTCTTCTTTCTTTTTTCAGTATAGTCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCTTAGTGGTTTTTCTTTTCTTCTTTCTTTTTTCAGTATAGTCAGT  150

seq1  GAAATACATCCAGGCTTTCCAATTTTCCAAACATGTTTTTTTGGGGGTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATACATCCAGGCTTTCCAATTTTCCAAACATGTTTTTTTGGGGGTAG  200

seq1  GGTGGCATACTCCAATCCACTTAGCTGAACAAACTGTTGTAGAAGGAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCATACTCCAATCCACTTAGCTGAACAAACTGTTGTAGAAGGAAAT  250

seq1  CAGTTCTCTTCCTCACAAGTTGACCTTGGACCTACCTCAACTTATCCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTCTTCCTCACAAGTTGACCTTGGACCTACCTCAACTTATCCAGG  300

seq1  CATTGAAATGGAATTTCTAACCATGGCATTCTCTGTTTTCAGGCTTTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAAATGGAATTTCTAACCATGGCATTCTCTGTTTTCAGGCTTTTGA  350

seq1  AATCAAACCAGACCTTTTTGGTTTCTGGATTGTAGATAGATGACACATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAACCAGACCTTTTTGGTTTCTGGATTGTAGATAGATGACACATGA  400

seq1  ACCAATGCATCATAAACCTCTATGCATCATAAAACTCTATGGCAAAAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATGCATCATAAACCTCTATGCATCATAAAACTCTATGGCAAAAGAG  450

seq1  TAGGGCATGTTTGCTCTTTCTTGTTTGAGGGACATTAATTATTATAATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCATGTTTGCTCTTTCTTGTTTGAGGGACATTAATTATTATAATCT  500

seq1  TAACAAAGTAAAATCATGCTTCAGGAGAATATACTTATAAGTGTTTATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAAGTAAAATCATGCTTCAGGAGAATATACTTATAAGTGTTTATGT  550

seq1  TTGGACATTATAATGTACTTTCATTAATTCTCTTTCCTTCCTTCAATCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACATTATAATGTACTTTCATTAATTCTCTTTCCTTCCTTCAATCTA  600

seq1  CCCATATACCCCATCTTGTCCTCTTTCAATTCCATTTGTCCTTTTTAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATATACCCCATCTTGTCCTCTTTCAATTCCATTTGTCCTTTTTAAAT  650

seq1  TATATATACATAATATATATTGTATATATATATATATATATATATATATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATACATAATATATATTGTATATATATATATATATATATATATATA  700

seq1  TATATATATATATATGCTCAGCATGCATAATG-TTGCTTGGTTTTGTATG  749
      ||||||||||||||||||||||||||| |||| |||||||||||||||||
seq2  TATATATATATATATGCTCAGCATGCAAAATGTTTGCTTGGTTTTGTATG  750

seq1  ATAC-AAGGGCTTACC-TCTTAATATTAGATAACCAG-TTGGGAGATC-T  795
      |||| ||||||||||| |||||||||||||||||||| |||||||||| |
seq2  ATACAAAGGGCTTACCTTCTTAATATTAGATAACCAGTTTGGGAGATCTT  800

seq1  AT-TTTTACTGCACTCAATA-TTTCAT-AGCTGCCTGT-AGTGG-CCTGA  840
      || ||||||||||||||||| |||||| |||||||||| ||||| |||||
seq2  ATATTTTACTGCACTCAATATTTTCATAAGCTGCCTGTAAGTGGCCCTGA  850

seq1  TGTGCTATTCCTCTTCCAT-GTTA--TCA-TTCCTATT-GGTGTCATC-T  884
      ||||| ||||| ||| ||| ||||  ||| |||||||| ||||||||| |
seq2  TGTGCAATTCCACTTACATGGTTATTTCATTTCCTATTGGGTGTCATCTT  900

seq1  TGTTTAAGCAACCATACAG-ATAATA-TTCCATGGG--TAT-AACCT--C  927
      || |||||||||||||||| |||||| |||||||||   || |||||  |
seq2  TGGTTAAGCAACCATACAGAATAATATTTCCATGGGGCAATAAACCTCCC  950

seq1  TCTG-ACATTTCT-AGGTAACAAAAA---TTTTTTTCTTTTTCTCT-AG-  970
      |||| || ||||| ||||||||||||   ||||||||||||| ||| || 
seq2  TCTGAACTTTTCTAAGGTAACAAAAAATTTTTTTTTCTTTTTTTCTCAGA  1000

seq1  AAATTGCAA-TCTTT--CCATTCCTTTTT  996
      ||||||||| |||||  | ||||||||||
seq2  AAATTGCAATTCTTTTGCAATTCCTTTTT  1029


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