BAC Information

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BAC

Clone NameB6Ng01-346H19
Chromosome3 (Build37)
Map Location 77,374,546 - 77,375,428
singlet/doubletsinglet
Overlap genenone
Upstream geneFstl5, LOC100041625, LOC100041635, Dnmt3a-ps1
Downstream geneEG626461, LOC667526, LOC626479, LOC100041691
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-346H19.bB6Ng01-346H19.g
ACCGA128369GA128370
length1,142446
definitionB6Ng01-346H19.b B6Ng01-346H19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctttaatattgctcgtgtggatatactttaaaggctgactactt
ggtactggaaaatcaattagggatacagccccgaggatgaatggttctct
ctctcctatagtagtcataaattgcctgaaatccttagtataatagtaag
gccttgcaaaatttctcataccaatattgacttgccaactagtattgtca
ttgtttaggtttcctttggtaactatattgttgacatttcatggttgtag
cttccctgtcatataaaaaagacactaacttatagagtatctcctgaccc
tctggctcttagaattttctatggtttcttctatgatgttccctgaacct
tttggtataggagtaacattaccatttgagattggacaccatgtaaccaa
ccatggaagttttgcaagttgtagctttcattgctgctctctgatataag
aagaatcttctttgatgaggagtaagagataaatgactttgtgggtataa
gggtaaatatttagaatttagacattatagtgttttagaaaattggcaat
aatatgttctgttatgggctccatgaccttaccagatagcatatgggtag
ctagccaggtttatggtactagtcacaaattgcctcttattgagaaggct
gtatttcagttttccagatacggcatgccaccagcatattagtgccatta
ttcacccttgaagatatcttgctacactgctaattgttgtgattcaggac
atccatgtgtcaggatttgggcagggttattcattgattattctccctga
tttttaatctctgaattaaccagtatcattaattgcaaggaaccatggag
ttggcttgccttgacaggcatatgccataggtatttcagttagagtctat
ggctcctggagtacaatgtgtcttgcagttccttagagacacatgcattc
cctcaggcagtgaagcattcaggcctctttgtgtttctctgtatgttctt
ttactagtcaagaaaacatgaaagcttgaaaggacaattggtcttagaca
attaattttgtgtaccctgcataacttgcaagcatcattgtacctggcca
aatcaacctttaattgatcctggcaaattgccctgttatttt

ttgtgtgaaaagggattagtgtaactgtggcttcacaaaatgagtttaga
aagggtaaattctgtttattttgtggaatagtttgaggagtattgatatt
agctcttctttgaaagtctggtagagtctttgcaaagaaaccatttggct
gtgggcatttttttgattgggtgacttttaattgtttcttttttatttag
gagttacagagctatctaaatagtttatcttatcttgatttagcattggt
aaatgatatctatctaaaaaattgtccacttctttaatattttcttactt
tgtagaatgccttcttttgaagtaacagctaatattttttggaatttcct
cagtgtctgctgtttttgtcttttttttttatttctgacccccctctttt
tttttttgtggggaaaaacccccccccccctatttttacttagggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_77374546_77375428
seq2: B6Ng01-346H19.b_302_1187

seq1  TGTCATATAAAAAAGACACTAACTTATAGAGTATCTCCTGACCCTCTGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATATAAAAAAGACACTAACTTATAGAGTATCTCCTGACCCTCTGGC  50

seq1  TCTTAGAATTTTCTATGGTTTCTTCTATGATGTTCCCTGAACCTTTTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGAATTTTCTATGGTTTCTTCTATGATGTTCCCTGAACCTTTTGGT  100

seq1  ATAGGAGTAACATTACCATTTGAGATTGGACACCATGTAACCAACCATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAGTAACATTACCATTTGAGATTGGACACCATGTAACCAACCATGG  150

seq1  AAGTTTTGCAAGTTGTAGCTTTCATTGCTGCTCTCTGATATAAGAAGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTGCAAGTTGTAGCTTTCATTGCTGCTCTCTGATATAAGAAGAAT  200

seq1  CTTCTTTGATGAGGAGTAAGAGATAAATGACTTTGTGGGTATAAGGGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTGATGAGGAGTAAGAGATAAATGACTTTGTGGGTATAAGGGTAA  250

seq1  ATATTTAGAATTTAGACATTATAGTGTTTTAGAAAATTGGCAATAATATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTAGAATTTAGACATTATAGTGTTTTAGAAAATTGGCAATAATATG  300

seq1  TTCTGTTATGGGCTCCATGACCTTACCAGATAGCATATGGGTAGCTAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTATGGGCTCCATGACCTTACCAGATAGCATATGGGTAGCTAGCC  350

seq1  AGGTTTATGGTACTAGTCACAAATTGCCTCTTATTGAGAAGGCTGTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTATGGTACTAGTCACAAATTGCCTCTTATTGAGAAGGCTGTATTT  400

seq1  CAGTTTTCCAGATACGGCATGCCACCAGCATATTAGTGCCATTATTCACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTCCAGATACGGCATGCCACCAGCATATTAGTGCCATTATTCACC  450

seq1  CTTGAAGATATCTTGCTACACTGCTAATTGTTGTGATTCAGGACATCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAGATATCTTGCTACACTGCTAATTGTTGTGATTCAGGACATCCAT  500

seq1  GTGTCAGGATTTGGGCAGGGTTATTCATTGATTATTCTCCCTGATTTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAGGATTTGGGCAGGGTTATTCATTGATTATTCTCCCTGATTTTTA  550

seq1  ATCTCTGAATTAACCAGTATCATTAATTGCAAGGAACCATGGAGTTGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGAATTAACCAGTATCATTAATTGCAAGGAACCATGGAGTTGGCT  600

seq1  TGCCTTGACAGGCATATGCCATAGGTATTTCAGGTTAGAGTCTATGGCTC  650
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGCCTTGACAGGCATATGCCATAGGTATTTCA-GTTAGAGTCTATGGCTC  649

seq1  CTGGAGTACAATGTGTCTTGCAGTTCCTTAGAGACACATGCATTCCCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGTACAATGTGTCTTGCAGTTCCTTAGAGACACATGCATTCCCTCA  699

seq1  GGCAGTGAAGCATTCAGGCCTCTTTGTGTTTCTCTGTATGTTCTTTTACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTGAAGCATTCAGGCCTCTTTGTGTTTCTCTGTATGTTCTTTTACT  749

seq1  AGTCAAGAAAACATGAAAGCTTGAAAGGACAATTGGTCTTAGAC-ATTAA  799
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AGTCAAGAAAACATGAAAGCTTGAAAGGACAATTGGTCTTAGACAATTAA  799

seq1  TCTTGTGTACCCTGCATAACTTGCAAGCATCATTGTACCCTGGCAATACA  849
      | |||||||||||||||||||||||||||||||||||||  | |||  ||
seq2  TTTTGTGTACCCTGCATAACTTGCAAGCATCATTGTACCTGGCCAAATCA  849

seq1  AC--TGTATTGATCCTGGC-AATTGCCCCTGTATTTT  883
      ||  |  |||||||||||| ||||||||   ||||||
seq2  ACCTTTAATTGATCCTGGCAAATTGCCCTGTTATTTT  886


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