MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-346M05
Chromosome	3 (Build37)
Map Location	129,566,610 - 129,575,835
singlet/doublet	doublet
Overlap gene	Cfi
Upstream gene	EG668831, Pitx2, Enpep, LOC100043415, LOC435755, LOC668840, Elovl6, LOC100043758, Egf, Gm421, Rrh, Nola1
Downstream gene	Pla2g12a, Casp6, Ccdc109b, Sec24b, EG668844, EG668845, Col25a1, Agxt2l1, 2310008M10Rik, Rpl34, LOC546811
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG668831 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668831 MGI:3643269
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 63 ESTs, 6 Proteins

name	Pitx2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18741 MGI:109340
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Enpep (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13809 MGI:106645
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043415 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043415
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	LOC435755 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435755
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 18 Proteins

name	LOC668840 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668840
definition	note : 60S ribosomal protein L7a pseudogene pseudo : _no_value

name	Elovl6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170439 MGI:2156528
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043758 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043758
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Egf (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13645 MGI:95290
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm421 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242235 MGI:2685267
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	Rrh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20132 MGI:1097709
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nola1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68147 MGI:1930948
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cfi (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12630 MGI:105937
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pla2g12a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66350 MGI:1913600
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Casp6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12368 MGI:1312921
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccdc109b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66815 MGI:1914065
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sec24b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:99683 MGI:2139764
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG668844 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668844 MGI:3645563
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 mRNAs, 1508 ESTs, 8 Proteins

name	EG668845 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668845 MGI:3645564
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Col25a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77018 MGI:1924268
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Agxt2l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71760 MGI:1919010
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310008M10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66357 MGI:1913607
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rpl34 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68436 MGI:1915686
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC546811 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546811
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	EG668831 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149251481 GeneID:668831 MGI:3643269
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 63 ESTs, 6 Proteins product : predicted gene, EG668831 transcript_id : XM_001003884.2

name	Pitx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109948273 GeneID:18741 MGI:109340
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : paired-like homeodomain transcription factor 2 transcript_id : NM_011098.3

name	Pitx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109948276 GeneID:18741 MGI:109340
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : paired-like homeodomain transcription factor 2 transcript_id : NM_001042504.1

name	Pitx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109948274 GeneID:18741 MGI:109340
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : paired-like homeodomain transcription factor 2 transcript_id : NM_001042502.1

name	Enpep (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124286800 GeneID:13809 MGI:106645
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamyl aminopeptidase transcript_id : NM_007934.3

name	LOC100043415 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251396 GeneID:100043415
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : similar to cyclic nucleotide gated channel beta 1 transcript_id : XM_001480111.1

name	Elovl6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:91598889 GeneID:170439 MGI:2156528
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ELOVL family member 6, elongation of long chain fatty acids (yeast) transcript_id : NM_130450.2

name	LOC100043758 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251482 GeneID:100043758
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043758 transcript_id : XM_001481055.1

name	Egf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375391 GeneID:13645 MGI:95290
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : epidermal growth factor transcript_id : NM_010113.2

name	Gm421 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149251399 GeneID:242235 MGI:2685267
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : gene model 421, (NCBI) transcript_id : XM_143529.6

name	Rrh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114842394 GeneID:20132 MGI:1097709
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : retinal pigment epithelium derived rhodopsin homolog transcript_id : NM_009102.3

name	Nola1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366408 GeneID:68147 MGI:1930948
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs) transcript_id : NM_026578.2

name	Cfi (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347405 GeneID:12630 MGI:105937
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : complement component factor i transcript_id : NM_007686.2

name	Pla2g12a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24475672 GeneID:66350 MGI:1913600
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phospholipase A2, group XIIA transcript_id : NM_023196.2

name	Pla2g12a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34556196 GeneID:66350 MGI:1913600
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phospholipase A2, group XIIA transcript_id : NM_183423.1

name	Casp6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981864 GeneID:12368 MGI:1312921
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : caspase 6 transcript_id : NM_009811.2

name	Ccdc109b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982669 GeneID:66815 MGI:1914065
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 109B transcript_id : NM_025779.2

name	Sec24b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130985 GeneID:99683 MGI:2139764
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SEC24 related gene family, member B (S. cerevisiae) transcript_id : NM_207209.2

name	EG668844 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149251484 GeneID:668844 MGI:3645563
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 mRNAs, 1508 ESTs, 8 Proteins product : predicted gene, EG668844 transcript_id : XM_001003945.2

name	Col25a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46397404 GeneID:77018 MGI:1924268
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : procollagen, type XXV, alpha 1 transcript_id : NM_198711.2

name	Col25a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46397405 GeneID:77018 MGI:1924268
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : procollagen, type XXV, alpha 1 transcript_id : NM_029838.3

name	Agxt2l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802115 GeneID:71760 MGI:1919010
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : alanine-glyoxylate aminotransferase 2-like 1 transcript_id : NM_027907.2

name	2310008M10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982672 GeneID:66357 MGI:1913607
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310008M10 gene transcript_id : NM_025509.2

name	Rpl34 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:55742884 GeneID:68436 MGI:1915686
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein L34 transcript_id : NM_026724.1

name	Rpl34 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131103 GeneID:68436 MGI:1915686
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein L34 transcript_id : NM_001005859.2

name	EG668831 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94369906 GeneID:668831 MGI:3643269
definition	codon_start : 1 product : similar to Ttc5 protein protein_id : XP_001003884.1

name	Pitx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30841039 CCDS:CCDS17830.1 GeneID:18741 MGI:109340
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence ISS] [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence ISS] [Evidence IDA]; GO:0008134 - transcription factor binding [Evidence ISS] GO_process : GO:0007368 - determination of left/right symmetry [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0002074 - extraocular skeletal muscle development (sensu Mammalia) [Evidence IMP]; GO:0007507 - heart development [Evidence IGI] [Evidence IMP]; GO:0007389 - pattern specification [Evidence IMP]; GO:0001569 - patterning of blood vessels [Evidence IMP]; GO:0030334 - regulation of cell migration [Evidence IMP]; GO:0042127 - regulation of cell proliferation [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence ISS] [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IDA] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : paired-like homeodomain transcription factor 2 isoform b protein_id : NP_035228.2

name	Pitx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:109948277 GeneID:18741 MGI:109340
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence ISS] [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence ISS] [Evidence IDA]; GO:0008134 - transcription factor binding [Evidence ISS] GO_process : GO:0007368 - determination of left/right symmetry [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0002074 - extraocular skeletal muscle development (sensu Mammalia) [Evidence IMP]; GO:0007507 - heart development [Evidence IGI] [Evidence IMP]; GO:0007389 - pattern specification [Evidence IMP]; GO:0001569 - patterning of blood vessels [Evidence IMP]; GO:0030334 - regulation of cell migration [Evidence IMP]; GO:0042127 - regulation of cell proliferation [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence ISS] [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IDA] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : paired-like homeodomain transcription factor 2 isoform a protein_id : NP_001035969.1

name	Pitx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:109948275 GeneID:18741 MGI:109340
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence ISS] [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence ISS] [Evidence IDA]; GO:0008134 - transcription factor binding [Evidence ISS] GO_process : GO:0007368 - determination of left/right symmetry [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0002074 - extraocular skeletal muscle development (sensu Mammalia) [Evidence IMP]; GO:0007507 - heart development [Evidence IGI] [Evidence IMP]; GO:0007389 - pattern specification [Evidence IMP]; GO:0001569 - patterning of blood vessels [Evidence IMP]; GO:0030334 - regulation of cell migration [Evidence IMP]; GO:0042127 - regulation of cell proliferation [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence ISS] [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IDA] codon_start : 1 note : isodorm c is encoded by transcript variant 3 product : paired-like homeodomain transcription factor 2 isodorm c protein_id : NP_001035967.1

name	Enpep (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679653 CCDS:CCDS17831.1 GeneID:13809 MGI:106645
definition	GO_component : GO:0045177 - apical part of cell [Evidence IDA]; GO:0016324 - apical plasma membrane [Evidence IDA]; GO:0005903 - brush border [Evidence IDA]; GO:0031410 - cytoplasmic vesicle [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence TAS] GO_function : GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0004230 - glutamyl aminopeptidase activity [Evidence IDA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004179 - membrane alanyl aminopeptidase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0001525 - angiogenesis [Evidence IMP]; GO:0016477 - cell migration [Evidence ISS]; GO:0008283 - cell proliferation [Evidence ISS]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : aminopeptidase-A product : glutamyl aminopeptidase protein_id : NP_031960.1

name	LOC100043415 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251397 GeneID:100043415
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480161.1

name	Elovl6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18496985 GeneID:170439 MGI:2156528
definition	GO_component : GO:0030176 - integral to endoplasmic reticulum membrane [Evidence IDA] GO_function : GO:0016747 - transferase activity, transferring groups other than amino-acyl groups [Evidence IDA] GO_process : GO:0030497 - fatty acid elongation [Evidence IDA] codon_start : 1 note : long chain fatty acyl elongase; FEN1/Elo2, SUR4/Elo3-like product : ELOVL family member 6, elongation of long chain fatty acids protein_id : NP_569717.1

name	LOC100043758 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251483 GeneID:100043758
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481105.1

name	Egf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753732 CCDS:CCDS17833.1 GeneID:13645 MGI:95290
definition	GO_component : GO:0005615 - extracellular space [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0008083 - growth factor activity [Evidence ISS] [Evidence IEA] GO_process : GO:0000186 - activation of MAPKK activity [Evidence IDA]; GO:0048754 - branching morphogenesis of a tube [Evidence IDA]; GO:0007173 - epidermal growth factor receptor signaling pathway [Evidence IDA]; GO:0018108 - peptidyl-tyrosine phosphorylation [Evidence IDA]; GO:0008284 - positive regulation of cell proliferation [Evidence ISS] [Evidence IGI] [Evidence IDA]; GO:0050730 - regulation of peptidyl-tyrosine phosphorylation [Evidence IDA] codon_start : 1 exception : mismatches in translation product : epidermal growth factor protein_id : NP_034243.1

name	Gm421 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149251400 GeneID:242235 MGI:2685267
definition	codon_start : 1 product : similar to FLJ44691 protein protein_id : XP_143529.6

name	Rrh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677821 GeneID:20132 MGI:1097709
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0018298 - protein-chromophore linkage [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0007601 - visual perception [Evidence IEA] codon_start : 1 note : peropsin product : retinal pigment epithelium derived rhodopsin homolog protein_id : NP_033128.1

name	Nola1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384710 GeneID:68147 MGI:1930948
definition	GO_component : GO:0001651 - dense fibrillar component [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005732 - small nucleolar ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003723 - RNA binding [Evidence IEA]; GO:0019843 - rRNA binding [Evidence IEA]; GO:0030515 - snoRNA binding [Evidence ISS] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007046 - ribosome biogenesis [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA] codon_start : 1 note : H/ACA small nucleolar RNPs product : nucleolar protein family A, member 1 protein_id : NP_080854.1

name	Cfi (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347406 CCDS:CCDS17835.1 GeneID:12630 MGI:105937
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003818 - complement factor I activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005044 - scavenger receptor activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] GO_process : GO:0006956 - complement activation [Evidence IEA]; GO:0006958 - complement activation, classical pathway [Evidence IEA]; GO:0006955 - immune response [Evidence IEA]; GO:0045087 - innate immune response [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : complement component factor i protein_id : NP_031712.2

name	Pla2g12a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963565 CCDS:CCDS17836.1 GeneID:66350 MGI:1913600
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0005576 - extracellular region [Evidence IEA]; GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0005622 - intracellular [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004623 - phospholipase A2 activity [Evidence IDA] GO_process : GO:0016042 - lipid catabolism [Evidence IC]; GO:0006644 - phospholipid metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 1 is encoded by transcript variant 1; group XIIA secreted phospholipase A2 product : group XII-1 phospholipase A2 isoform 1 protein_id : NP_075685.1

name	Pla2g12a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34556197 CCDS:CCDS17837.1 GeneID:66350 MGI:1913600
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0005576 - extracellular region [Evidence IEA]; GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0005622 - intracellular [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004623 - phospholipase A2 activity [Evidence IDA] GO_process : GO:0016042 - lipid catabolism [Evidence IC]; GO:0006644 - phospholipid metabolism [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; group XIIA secreted phospholipase A2 product : group XII-1 phospholipase A2 isoform 2 protein_id : NP_904359.1

name	Casp6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981865 CCDS:CCDS17838.1 GeneID:12368 MGI:1312921
definition	GO_function : GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0006917 - induction of apoptosis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : caspase 6 protein_id : NP_033941.2

name	Ccdc109b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982670 CCDS:CCDS17839.1 GeneID:66815 MGI:1914065
definition	codon_start : 1 product : coiled-coil domain containing 109B protein_id : NP_080055.2

name	Sec24b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46402179 CCDS:CCDS17840.1 GeneID:99683 MGI:2139764
definition	GO_component : GO:0030127 - COPII vesicle coat [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence IEA] codon_start : 1 product : SEC24 related gene family, member B protein_id : NP_997092.1

name	EG668844 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149251485 GeneID:668844 MGI:3645563
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001003945.2

name	Col25a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38570079 GeneID:77018 MGI:1924268
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005576 - extracellular region [Evidence ISS]; GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; collagen, type XXV, alpha 1; collagen-like Alzheimer amyloid plaque component product : collagen, type XXV, alpha 1 isoform 2 protein_id : NP_942004.1

name	Col25a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38570077 GeneID:77018 MGI:1924268
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005576 - extracellular region [Evidence ISS]; GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; collagen, type XXV, alpha 1; collagen-like Alzheimer amyloid plaque component product : collagen, type XXV, alpha 1 isoform 1 protein_id : NP_084114.2

name	Agxt2l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313030 GeneID:71760 MGI:1919010
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation product : alanine-glyoxylate aminotransferase 2-like 1 protein_id : NP_082183.1

name	2310008M10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384930 GeneID:66357 MGI:1913607
definition	GO_component : GO:0008250 - oligosaccharyl transferase complex [Evidence ISS] GO_function : GO:0004579 - dolichyl-diphosphooligosaccharide-protein glycotransferase activity [Evidence ISS] GO_process : GO:0018279 - protein amino acid N-linked glycosylation via asparagine [Evidence ISS] codon_start : 1 product : DC2 protein protein_id : NP_079785.1

name	Rpl34 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:55741555 CCDS:CCDS17841.1 GeneID:68436 MGI:1915686
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 note : 60S ribosomal protein L34 product : ribosomal protein L34 protein_id : NP_001005859.1

name	Rpl34 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:55742885 CCDS:CCDS17841.1 GeneID:68436 MGI:1915686
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 note : 60S ribosomal protein L34 product : ribosomal protein L34 protein_id : NP_081000.1

name	EG668845 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668845
definition	number : 1 pseudo : _no_value

name	EG668845 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668845
definition	number : 2 pseudo : _no_value

name	EG668845 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668845
definition	number : 3 pseudo : _no_value

name	EG668845 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668845
definition	number : 4 pseudo : _no_value

name	LOC546811 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546811
definition	number : 5 pseudo : _no_value

name	LOC546811 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546811
definition	number : 4 pseudo : _no_value

name	LOC546811 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546811
definition	number : 3 pseudo : _no_value

name	LOC546811 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546811
definition	number : 2 pseudo : _no_value

name	LOC546811 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546811
definition	number : 1 pseudo : _no_value

name	LOC435755 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149251398 GeneID:435755
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 18 Proteins product : POU domain, class 5, transcription factor 1-like transcript_id : XR_034544.1

name	(CDS detail)
type	unsure
link
xref
definition	note : single clone coverage

clone name	MSMg01-528E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275N09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-099A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446I03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-271I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080K19
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-346M05.b	B6Ng01-346M05.g
ACC	GA128570	GA128571
length	1,232	1,177
definition	B6Ng01-346M05.b	B6Ng01-346M05.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(129,566,610 - 129,567,865)	(129,574,638 - 129,575,835)
sequence	gaattcctttgaaacatctccttagcaaaagcttaagtcttggggtaagc aattctctaattgagaaatagcacccgaatattctttgccagagctaagt accagttctcgcatccggctaccctgtcagccctttctcctcacccacca acatagaccgctatccatcctaacactgtgctagcggcccacggccacat gatggcgctgttcactattcacgcagactctgacaacaggcaatggctcg ggttgggcctcgcggtccactggttctttctcctgcctgtcacttgttca tatcttctcaccactcacaccctcggctttatgttagatttctctcactg cagtctcctcttacggatttgcaggagtccccttcaccgtctagatgtta atcctttgtcagctttagacatcacagtatcatctccattccatcaccca tctgtttattagctccatccatgatgaagtctgttgaaaagaaagtctta attttgagtcaggaaaatggattagtaggtagaggtggccatcacttctg tctacttgagtctaatccccaggaacatcattaatggaaggaggactgag tctttgaagttgtcttctgtcttccacatgtgtgtttatgcacacaccta cataatactcacacaaatgtgcaaaaataaatgtaacaaaactgaaatct ttagtttttatatcaccaagaacatcaaacatttttcctatggcctgtgt tttctaagtttcatattcttctaatacccagaaccctccagtgacactgg actgtccctacttgcttttattgggcatttaatgtcatattatagtcatc tctgatccatacatgtactcatgtgagtgcctctgagaagagcccttcat accctggacacatcttagcatatgatatatagtcctaggtgtctgttcca aagagaactggagacatctagaaacaaaattcaagaccagtgcctgaaat agttgctagactggcctgtctgtcccggctatttctcaccccaagcagac tagcatgttggtagggatctacctgtagacctccagactgtattgattat gatcctgtcttgccgcgtgccctggatgcagttagaaggtttgaaataga atgttagccagatcagccaaatctcgatttgccaccttgaacatatgcta gctactatctataagacatctgagtcatctct	gaattcccaactgagagttaggttttagccagtctaataaagccgtccag acttggtaactgtgagctctactgggtctgtaagagaaaggaacaggaaa cgaactatatcaagaaaagatagggatcttggtacttcatctttgtagtt tttcctttaaaggataaatctcagttttttttttttaaatctttagtgat attgtgatggtgtatatgctcggcccagggaatatggccttgttgtgggt tgtgggctttaggaccttcatcctagccgcctggaagccagtcttccact agcagccttcagatgaagatgtagaactctcagctctgcctgcaccatgc ctgcctggatgctgccatgctttcaccttgatgataatggactgaacctc tgaacctgtaagccagccccagttaaatgttgtccttataagagttgcct tggtcatggtgtctgttcacagcagtaaaaccctaagtaggacagatatg aaactggagagttccattgatgtagactagggtgactgagtggtcaatgg agagagcactgagtccccagcacttcccatgatctcattgtctaaccttt ccaaatcgtgaaatatgtcacagagtggactgtccatgagcaaaaacttg aacatttaaaatatcttcttttgtcctctgtatattattaaaaatcatct ataatcttatttcctcatcaaatagtacaaactgaatagaaattatcttt ccttcatagcagctcagaccatcacagtacgtacagttcaagagcaatgt cctaggagataatgtggtgtttggatgctgttacttatacctaagagttc caagaatgctgccatccatgttgatttgggttgtattatagtgcagggat cagaaatagtccttgaaggttaactcggtttctatggcttactgggcaca gatatagttgtttgccaactacacaggcaggtattgtactgggcactggg gtacagaagttagcaaaccagaaagcatttagaaaaacatgcatcgcctg gattgtgatcacaatgctgaagagagagagatctgtgagggagtagaggt tccagacggatgctttagacttatggagacttaactaaagcattcagggg tgactccagatcaggtgcctgaatctg
quality values	Open. Hide. 58 33 22 26 58 58 58 58 58 58 58 28 44 52 43 42 47 62 62 62 62 62 35 62 56 47 56 62 62 42 42 51 41 21 32 27 32 56 51 62 62 62 49 49 59 62 62 43 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 37 54 62 59 59 62 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 54 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 58 58 58 58 58 58 58 58 58 58 58 58 54 54 58 49 42 58 54 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 54 58 58 54 54 58 58 51 58 52 58 58 54 54 54 58 58 54 58 58 58 58 58 58 58 58 58 43 58 58 45 58 54 30 58 58 58 46 54 58 58 58 58 51 58 58 48 49 58 58 53 58 53 58 58 58 58 52 58 58 52 52 41 50 52 51 58 58 54 58 58 58 53 58 46 52 46 51 51 50 54 58 54 49 58 58 58 52 58 52 58 52 39 53 53 54 58 46 52 53 58 53 50 58 50 51 49 52 53 53 40 58 58 58 52 53 49 58 42 51 53 50 50 50 52 40 58 58 46 50 58 53 49 24 37 49 53 52 49 44 40 38 53 58 58 58 50 50 50 42 53 39 49 50 50 36 44 37 58 50 35 32 53 47 31 58 51 43 39 53 58 58 58 46 34 39 40 42 45 52 28 6 42 41 54 37 54 54 54 51 34 53 39 31 52 35 41 54 45 39 39 42 37 49 49 49 52 53 53 33 30 39 42 39 37 54 41 33 30 46 28 31 54 42 47 32 45 34 37 33 53 31 29 32 37 40 46 47 30 24 40 53 31 36 54 51 37 33 33 33 40 52 32 45 54 54 46 27 31 43 53 53 45 32 25 21 51 32 32 32 33 38 20 43 31 34 29 24 45 41 33 42 37 40 40 33 32 37 43 42 32 31 28 22 34 30 26 35 31 31 26 33 42 26 19 30 36 36 29 32 51 34 31 42 27 38 38 33 37 39 36 36 27 42 14 36 31 21 42 19 25 51 31 32 36 28 31 34 32 31 46 29 31 18 7 10 18 31 32 24 31 36 36 33 16 33 14 21 38 31 19 20 38 20 21 12 46 22 31 21 25 22 27 31 19 20 16 22 32 19 38 27 37 20 32 32 30 32 48 32 21 41 19 30 26 24 34 30 31 28 15 28 14 12 18 32 35 30 24 31 48 16 25 15 44 44 33 21 29 26 22 25 21 42 21 32 33 18 18 42 21 27 33 24 36 44 32 16 7 5 5 18 34 27 24 14 22 33 22 28 25 28 9 23 22 19 21 12 24 32 21 34 47 33 11 20 19 24 17 21 7 4 9 4 8 5 5 37 48 32 14 22 15 10 10 10 30 13 32 28 14 34 17 13 19 11 37 13 16 10 10 16 48 15 12 15 24 24 20 24 25 16 26 17 6 5 13 24 27 23 20 28 12 13 29 13 20 28 8 21 6 11 20 24 26 20 11 17 15 28 20 15 23 11 24 6 6 4 7 7 18 13 3 3 5 10 15 10 38 14 16 12 20 4 5 22 8 5 5 3 4 5 6 8 12 1 11 6 23 6 4 4 5 8 4 4 4 5 5 5 4 4 7 22 4 10 4 7 6 11 10 6 5 11 3 5 16 30 11 16 12 22 7 5 15 18 28 22 8 7 7 4 16 17 5 9 4 3 6 22 9 7 9 4 6 6 17 11 14 8 6 20 5 9 5 5 3 3 4 6 6 4 8 11 5 8 4 2 2 2 3 3 2 9 4 5 8 20 10 10	Open. Hide. 62 44 43 59 62 62 62 59 44 18 24 23 25 19 9 23 23 25 30 32 54 54 62 62 62 62 59 46 59 59 59 59 62 62 59 59 62 62 62 54 62 62 62 62 62 62 62 59 59 62 59 62 59 50 59 32 28 32 32 40 56 56 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 59 62 56 56 56 62 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 59 62 62 62 59 62 59 59 62 62 62 59 62 62 59 62 62 62 62 56 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 45 62 59 56 62 59 59 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 56 62 62 62 62 56 56 56 32 43 56 56 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 42 62 62 62 62 62 62 62 54 58 58 58 58 58 58 58 58 58 58 58 54 54 58 58 52 54 54 54 54 54 58 58 58 58 58 58 58 58 58 58 54 58 58 54 58 58 58 52 58 58 58 54 54 58 58 54 52 54 54 58 54 54 58 54 51 58 46 58 58 58 58 42 58 58 45 42 54 49 51 50 58 58 58 46 58 53 54 52 50 53 53 58 53 58 46 49 53 58 58 58 32 53 58 52 53 58 58 58 58 48 40 58 54 47 43 51 53 53 46 58 58 58 52 54 45 52 50 39 58 53 58 53 53 52 37 58 51 51 58 50 50 58 58 58 40 41 39 39 53 51 48 50 50 50 32 58 40 50 51 43 43 39 51 58 41 53 51 30 51 52 54 24 50 39 58 58 58 50 50 54 51 50 50 49 49 42 52 58 53 39 58 58 40 39 32 35 53 53 53 51 49 54 54 51 39 27 54 54 39 53 45 53 32 37 45 32 40 31 52 33 35 31 54 54 54 35 33 40 33 41 53 52 42 42 42 52 37 51 37 40 45 42 36 47 33 51 40 42 29 52 53 41 54 47 42 40 33 31 33 40 32 54 41 35 33 53 40 33 33 45 34 53 54 25 28 40 35 36 41 32 49 53 36 45 27 40 40 32 32 39 37 40 40 26 32 45 32 26 17 29 20 34 31 42 36 31 45 31 32 34 28 32 31 43 35 45 32 33 25 33 32 26 29 33 51 13 32 27 26 33 37 21 31 37 34 36 26 31 37 20 37 27 38 29 28 41 28 42 31 23 45 31 47 29 43 28 32 22 31 29 36 32 9 31 30 38 31 38 24 27 33 34 37 33 33 38 18 42 18 31 31 29 36 25 32 30 38 34 33 36 22 34 34 29 36 22 37 32 43 19 32 33 14 14 23 31 31 48 31 31 48 31 22 24 22 16 26 30 32 28 32 6 7 11 36 27 21 25 48 30 13 20 22 14 18 42 48 31 23 28 24 26 32 25 32 21 32 22 19 25 24 15 7 24 24 31 34 33 23 36 33 48 31 31 19 25 15 31 30 24 25 30 12 17 21 34 48 29 16 22 27 9 24 22 17 10 18 28 18 11 7 20 6 48 34 32 11 19 17 20 27 32 19 30 11 23 17 30 20 26 18 17 26 22 22 37 9 25 18 28 32 31 29 48 33 13 10 29 24 28 47 47 30 18 20 24 12 11 8 24 11 21 21 22 20 27 28 47 23 5 15 5 7 8 40 21 11 16 17 21 38 18 11 7 9 40 34 30 9 14 13 24 27 20 20 28 20 11 8 9 26 19 19 15 19 9 17 4 13 21 24 13 7 6 5 11 20 28 20 27 18 25 16 9 26 5 6 3 2 5 10 7 18 11 17 5 10 8 5 14 8 23 10 20 5 10 21 7 18 5 23 6 4 5 17 7 10 21 7 17 5 5 2 3 10 16 30 17 5 5 18 9 10 12 5 7 11 3 1 2 8 5 17 17 8 11 11 16 11 15 26 8 8 6 15 14 16 5 17 27 17 6 6 7 16 10 9 5 19 2 3 3 2 5 4 3 3 2 3 6 7 8 10 10 16 5 11 4 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr3_129566610_129567865
seq2: B6Ng01-346M05.b_44_1275

seq1  GAATTCCTTTGAAACATCTCCTTAGCAAAAGCTTAAGTCTTGGGGTAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTGAAACATCTCCTTAGCAAAAGCTTAAGTCTTGGGGTAAGC  50

seq1  AATTCTCTAATTGAGAAATAGCACCCGAATATTCTTTGCCAGAGCTAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTCTAATTGAGAAATAGCACCCGAATATTCTTTGCCAGAGCTAAGT  100

seq1  ACCAGTTCTCGCATCCGGCTACCCTGTCAGCCCTTTCTCCTCACCCACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTTCTCGCATCCGGCTACCCTGTCAGCCCTTTCTCCTCACCCACCA  150

seq1  ACATAGACCGCTATCCATCCTAACACTGTGCTAGCGGCCCACGGCCACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGACCGCTATCCATCCTAACACTGTGCTAGCGGCCCACGGCCACAT  200

seq1  GATGGCGCTGTTCACTATTCACGCAGACTCTGACAACAGGCAATGGCTCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCGCTGTTCACTATTCACGCAGACTCTGACAACAGGCAATGGCTCG  250

seq1  GGTTGGGCCTCGCGGTCCACTGGTTCTTTCTCCTGCCTGTCACTTGTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGGCCTCGCGGTCCACTGGTTCTTTCTCCTGCCTGTCACTTGTTCA  300

seq1  TATCTTCTCACCACTCACACCCTCGGCTTTATGTTAGATTTCTCTCACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCTCACCACTCACACCCTCGGCTTTATGTTAGATTTCTCTCACTG  350

seq1  CAGTCTCCTCTTACGGATTTGCAGGAGTCCCCTTCACCGTCTAGATGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTCCTCTTACGGATTTGCAGGAGTCCCCTTCACCGTCTAGATGTTA  400

seq1  ATCCTTTGTCAGCTTTAGACATCACAGTATCATCTCCATTCCATCACCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTGTCAGCTTTAGACATCACAGTATCATCTCCATTCCATCACCCA  450

seq1  TCTGTTTATTAGCTCCATCCATGATGAAGTCTGTTGAAAAGAAAGTCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTATTAGCTCCATCCATGATGAAGTCTGTTGAAAAGAAAGTCTTA  500

seq1  ATTTTGAGTCAGGAAAATGGATTAGTAGGTAGAGGTGGCCATCACTTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGAGTCAGGAAAATGGATTAGTAGGTAGAGGTGGCCATCACTTCTG  550

seq1  TCTACTTGAGTCTAATCCCCAGGAACATCATTAATGGAAGGAGGACTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTTGAGTCTAATCCCCAGGAACATCATTAATGGAAGGAGGACTGAG  600

seq1  TCTTTGAAGTTGTCTTCTGTCTTCCACATGTGTGTTTATGCACACACCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGAAGTTGTCTTCTGTCTTCCACATGTGTGTTTATGCACACACCTA  650

seq1  CATAATACTCACACAAATGTGCAAAAATAAATGTAACAAAACTGAAATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATACTCACACAAATGTGCAAAAATAAATGTAACAAAACTGAAATCT  700

seq1  TTAGTTTTTATATCACCAAGAACATCAAACATTTTTCCTATGGCCTGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTTTATATCACCAAGAACATCAAACATTTTTCCTATGGCCTGTGT  750

seq1  TTTCTAAGTTTCATATTCTTCTAATACCCAGAACCCTCCAGTGACACTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAAGTTTCATATTCTTCTAATACCCAGAACCCTCCAGTGACACTGG  800

seq1  ACTGTCCCTACTTGCTTTTATTGGGCATTTAATGTCATATTATAGTCATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCCCTACTTGCTTTTATTGGGCATTTAATGTCATATTATAGTCATC  850

seq1  TCTGATCCATACATGTACTCATGTGAGTGCCTCTGAGAAGAGCCCTTCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATCCATACATGTACTCATGTGAGTGCCTCTGAGAAGAGCCCTTCAT  900

seq1  ACCCTGGGACACATCTTAGGCATATGATATAATAGTCCTAGGTGTCTGTT  950
      ||||| |||||||||||| ||||||||||| |||||||||||||||||||
seq2  ACCCT-GGACACATCTTA-GCATATGATAT-ATAGTCCTAGGTGTCTGTT  947

seq1  CCAAAGAGAACTGGAGACATCTAGAAACAAAATTCAAGACCAGTGCCTGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CCAAAGAGAACTGGAGACATCTAGAAACAAAATTCAAGACCAGTGCCTG-  996

seq1  AAATAAGGTTGCTAGACTGGCCTGTTCTGTCCCCGGCTATATCCTCACCC  1050
      |||||  ||||||||||||||||| ||||| ||||||||| | |||||||
seq2  AAATA--GTTGCTAGACTGGCCTG-TCTGT-CCCGGCTAT-TTCTCACCC  1041

seq1  CAAGCAGACTAGCATGTTGGTAGGGATCTACCTGTAGACCTCCAGACTGT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAGACTAGCATGTTGGTAGGGATCTACCTGTAGACCTCCAGACTGT  1091

seq1  AGTGATTATGATCCTGTC-TGCCGCCGTGCCCTGGGATGGCAGGGTAGAA  1149
      | |||||||||||||||| ||||| |||||||| |||| ||| | |||||
seq2  ATTGATTATGATCCTGTCTTGCCG-CGTGCCCT-GGAT-GCA-GTTAGAA  1137

seq1  AGGTTGAGATAG-ATGTAAGCAAGGAATCAGGGCAAATCTTCGATTTTTG  1198
       | |||| |||| |||| ||| ||  |||| | |||||| ||||  ||||
seq2  GGTTTGAAATAGAATGTTAGCCAG--ATCA-GCCAAATC-TCGA--TTTG  1181

seq1  CACCCTAGACCATAATGCTAGCTAACTATTCCTATAAGACAATCATGAAG  1248
      |  ||| || ||| ||||||||| |||||  ||||||||| ||| || ||
seq2  CCACCTTGAACAT-ATGCTAGCT-ACTAT--CTATAAGAC-ATC-TG-AG  1224

seq1  TCATCTCT  1256
      ||||||||
seq2  TCATCTCT  1232

seq1: chr3_129574638_129575835
seq2: B6Ng01-346M05.g_69_1245 (reverse)

seq1  CAGATTCAGGCAACCCTTGATTTCCTGTGGAGTCACCCCTGAATGCTTTT  50
      ||||||||||||   | |||     | ||||||||||||||||||| |||
seq2  CAGATTCAGGCA---CCTGA-----TCTGGAGTCACCCCTGAATGC-TTT  41

seq1  AGTTAAAGTCCTCCCCATAAGTTCTTAAAAGCCTTTCCCCTGTCT-GCAC  99
      ||||||     || ||||||| |||  ||||| |     | |||| | ||
seq2  AGTTAA----GTCTCCATAAG-TCT--AAAGCAT-----CCGTCTGGAAC  79

seq1  CTCTTACT-CCTCACAGGATCTCTCTCTCTTCAGCATTGTGATCACCAAT  148
      ||| |||| ||||||| |||||||||||||||||||||||||||| ||||
seq2  CTC-TACTCCCTCACA-GATCTCTCTCTCTTCAGCATTGTGATCA-CAAT  126

seq1  CCA-GCGATGCATG-TTTTCTAAATGCTTTCTGGTTTTGCTAACTTCTGT  196
      ||| |||||||||| ||||||||||||||||||| |||||||||||||||
seq2  CCAGGCGATGCATGTTTTTCTAAATGCTTTCTGG-TTTGCTAACTTCTGT  175

seq1  ACCCCAGTGCCCAGTACAATACCTGCCTGTGTAGTTGGCAAAC-ACTATA  245
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ACCCCAGTGCCCAGTACAATACCTGCCTGTGTAGTTGGCAAACAACTATA  225

seq1  TCTGTGCCCAGTAAGCCATAGAAACCGAGTTAACCTTCAAGGACTATTTC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGCCCAGTAAGCCATAGAAACCGAGTTAACCTTCAAGGACTATTTC  275

seq1  TGATCCCTGCACCTATAATACAACCCAAATCAACATGGATGGCAGCATTC  345
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGATCCCTGCA-CTATAATACAACCCAAATCAACATGGATGGCAGCATTC  324

seq1  TTGGAACTCTTAGGTATAAGTAACAGCATCCAAACACCACATTATCTCCT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAACTCTTAGGTATAAGTAACAGCATCCAAACACCACATTATCTCCT  374

seq1  AGGACATTGCTCTTGAACTGTACGTACTGTGATGGTCTGAGCTGCTATGA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATTGCTCTTGAACTGTACGTACTGTGATGGTCTGAGCTGCTATGA  424

seq1  AGGAAAGATAATTTCTATTCAGTTTGTACTATTTGATGAGGAAATAAGAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGATAATTTCTATTCAGTTTGTACTATTTGATGAGGAAATAAGAT  474

seq1  TATAGATGATTTTTAATAATATACAGAGGACAAAAGAAGATATTTTAAAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGATGATTTTTAATAATATACAGAGGACAAAAGAAGATATTTTAAAT  524

seq1  GTTCAAGTTTTTGCTCATGGACAGTCCACTCTGTGACATATTTCACGATT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAGTTTTTGCTCATGGACAGTCCACTCTGTGACATATTTCACGATT  574

seq1  TGGAAAGGTTAGACAATGAGATCATGGGAAGTGCTGGGGACTCAGTGCTC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGGTTAGACAATGAGATCATGGGAAGTGCTGGGGACTCAGTGCTC  624

seq1  TCTCCATTGACCACTCAGTCACCCTAGTCTACATCAATGGAACTCTCCAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATTGACCACTCAGTCACCCTAGTCTACATCAATGGAACTCTCCAG  674

seq1  TTTCATATCTGTCCTACTTAGGGTTTTACTGCTGTGAACAGACACCATGA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATATCTGTCCTACTTAGGGTTTTACTGCTGTGAACAGACACCATGA  724

seq1  CCAAGGCAACTCTTATAAGGACAACATTTAACTGGGGCTGGCTTACAGGT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGCAACTCTTATAAGGACAACATTTAACTGGGGCTGGCTTACAGGT  774

seq1  TCAGAGGTTCAGTCCATTATCATCAAGGTGAAAGCATGGCAGCATCCAGG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGTTCAGTCCATTATCATCAAGGTGAAAGCATGGCAGCATCCAGG  824

seq1  CAGGCATGGTGCAGGCAGAGCTGAGAGTTCTACATCTTCATCTGAAGGCT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCATGGTGCAGGCAGAGCTGAGAGTTCTACATCTTCATCTGAAGGCT  874

seq1  GCTAGTGGAAGACTGGCTTCCAGGCGGCTAGGATGAAGGTCCTAAAGCCC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTGGAAGACTGGCTTCCAGGCGGCTAGGATGAAGGTCCTAAAGCCC  924

seq1  ACAACCCACAACAAGGCCATATTCCCTGGGCCGAGCATATACACCATCAC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCCACAACAAGGCCATATTCCCTGGGCCGAGCATATACACCATCAC  974

seq1  AATATCACTAAAGATTTAAAAAAAAAAAACTGAGATTTATCCTTTAAAGG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCACTAAAGATTTAAAAAAAAAAAACTGAGATTTATCCTTTAAAGG  1024

seq1  AAAAACTACAAAGATGAAGTACCAAGATCCCTATCTTTTCTTGATATAGT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTACAAAGATGAAGTACCAAGATCCCTATCTTTTCTTGATATAGT  1074

seq1  TCGTTTCCTGTTCCTTTCTCTTACAGACCCAGTAGAGCTCACAGTTACCA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTTCCTGTTCCTTTCTCTTACAGACCCAGTAGAGCTCACAGTTACCA  1124

seq1  AGTCTGGACGGCTTTATTAGACTGGCTAAAACCTAACTCTCAGTTGGGAA  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGGACGGCTTTATTAGACTGGCTAAAACCTAACTCTCAGTTGGGAA  1174

seq1  TTC  1198
      |||
seq2  TTC  1177

BAC Information

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BAC

BAC End Information

Alignment Information