BAC Information

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BAC

Clone NameB6Ng01-348B22
Chromosome3 (Build37)
Map Location 64,893,597 - 64,894,768
singlet/doubletsinglet
Overlap genenone
Upstream geneEG56544, 4930518C23Rik, LOC380739, EG637004, EG667031, EG637053, LOC672951, EG639869, EG667060, EG667069, LOC100040918, 4933425M15Rik, LOC670110
Downstream geneKcnab1, Ssr3, EG433604, EG667093, LOC100041083, 4931440P22Rik, Tiparp, LOC545530, LOC100040978, EG624866, Ccnl1, LOC625048, Veph1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-348B22.bB6Ng01-348B22.g
ACCGA129508GA129509
length1,1631,130
definitionB6Ng01-348B22.b B6Ng01-348B22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaattcaactataaaaattcataagttgttgacacattctatgtg
aattatcatcaaaaactcatactaaagcagttagataaaacactatctac
attacactagtcactcatggtgaaatgatatttcagtggtagactgcatg
tgtaattgtggttccccaatattacaatagagatgaaaagttcatattac
ctagtgacatcatagctatgataatgttccagtagggaatgatatatttt
tggtgatgttggtgtaaacagctttctgtgggaatagttataaaaaagta
ttgcccagggatggggatcgaactctatggcacatgtttgcctaatattc
atgaggttctgagtcttatctgcagcaaagaaagaatgaatgttaatagt
aacaataaagtatagtacaatgatgtatagtaggaggtggtagtaaacaa
ctgttaatgatgtatgtatgtgtgtatataaatataaatgtatgcgtata
tatacatatattgtatttttatcattattcaaagtatattccttctgctt
acaaaatgttgacttacaggtttatgtgtgctatgctgacagccttgtag
tcagatgttaaccatctactgattataaggggccatgcacaaacactgaa
ctttgccatttagtttgtattcatatactctacaatgaccacataaaatt
gtctcctaaccacgactcttggaaggtattaagaataaactatcatgact
taattttacatttgtgacatgtatcaagaaggaacatttatagagacaga
aatgagattagcggttgcctagggctggaaatatgaataggggattaatg
gaaaatggacatagaaatttttgaggttatgggaacgctataaacttaaa
atagaattcatttatgggttgtacaattccataatttactgacattattg
atttgtacattcattttagatggattttatgacacataaattatatttcc
ataaaactgttgaaaactctacaggaaaaacagagtttgactttttggag
aagattgcttttacagtcccacagagcaaggttcagtcaggataagaatt
attaccatagccgatgatgctagagtatggcagtccctgaggactcatgg
ccaggatgaagag
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
tttcctgccgtctactcctcttgggtgaatttgctttccttttttctagg
gcttttagatgtgttgtcagctgctagtatgtgctgtcttcccgtttctt
cttggagcactcagcgctatgagtttcccttctagaaatgctttcatgtg
tcccatagtttggtacggtgtgctcatttccattaactctaaaagtctta
atttcgttcttatcgttctgacaagctatcatggtaagtgtatcagttcc
agtgagttgcttccactactatgtgatgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_64893597_64894768
seq2: B6Ng01-348B22.b_45_1207 (reverse)

seq1  CTCTCTCATCCT-GCCATGAAACTCCTTTCAGGGACTTCCCATACTCTTT  49
      |||| ||||||| ||||||  | |||  |||||||| | ||||||||  |
seq2  CTCT-TCATCCTGGCCATG--AGTCC--TCAGGGAC-TGCCATACTC--T  42

seq1  GCCTTCATCTGCTATGGTAATAAATCTTTAATCTGACTTCCAACCTTTGC  99
        | ||||| ||||||||||||| || |||  ||||||   |||| ||||
seq2  AGCATCATCGGCTATGGTAATAATTC-TTATCCTGACT--GAACC-TTGC  88

seq1  TCTGTGGG-CTGTAAAAAGCAAATCTTTCTCAAAAAAGTCATACTCTG-T  147
      |||||||| |||| |||||| |||| ||||| ||||||||| |||||| |
seq2  TCTGTGGGACTGT-AAAAGC-AATC-TTCTCCAAAAAGTCAAACTCTGTT  135

seq1  TTTCCTGTAGAGTTTTCAACAGTTTTATGGAAATATAATTTATGTGTCAT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGTAGAGTTTTCAACAGTTTTATGGAAATATAATTTATGTGTCAT  185

seq1  AAAATCCATCTAAAATGAATGTACAAATCAATAATGTCAGTAAATTATGG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCATCTAAAATGAATGTACAAATCAATAATGTCAGTAAATTATGG  235

seq1  AATTGTACAA-CCATAAATGAATTCTATTTTAAGTTTATAGCGTTCCCAT  296
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AATTGTACAACCCATAAATGAATTCTATTTTAAGTTTATAGCGTTCCCAT  285

seq1  AACCTCAAAAA-TTCTATGTCCATTTTCCATTAAT-CCCTATTCATATTT  344
      ||||||||||| ||||||||||||||||||||||| ||||||||||||||
seq2  AACCTCAAAAATTTCTATGTCCATTTTCCATTAATCCCCTATTCATATTT  335

seq1  CCAGCCCTAGGCAACCGCTAATCTCATTTCTGTCTCTATAAATGTTCCTT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCCTAGGCAACCGCTAATCTCATTTCTGTCTCTATAAATGTTCCTT  385

seq1  CTTGATACATGTCACAAATGTAAAATTAAGTCATGATAGTTTATTCTTAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATACATGTCACAAATGTAAAATTAAGTCATGATAGTTTATTCTTAA  435

seq1  TACCTTCCAAGAGTCGTGGTTAGGAGACAATTTTATGTGGTCATTGTAGA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTCCAAGAGTCGTGGTTAGGAGACAATTTTATGTGGTCATTGTAGA  485

seq1  GTATATGAATACAAACTAAATGGCAAAGTTCAGTGTTTGTGCATGGCCCC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATGAATACAAACTAAATGGCAAAGTTCAGTGTTTGTGCATGGCCCC  535

seq1  TTATAATCAGTAGATGGTTAACATCTGACTACAAGGCTGTCAGCATAGCA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATCAGTAGATGGTTAACATCTGACTACAAGGCTGTCAGCATAGCA  585

seq1  CACATAAACCTGTAAGTCAACATTTTGTAAGCAGAAGGAATATACTTTGA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAAACCTGTAAGTCAACATTTTGTAAGCAGAAGGAATATACTTTGA  635

seq1  ATAATGATAAAAATACAATATATGTATATATACGCATACATTTATATTTA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGATAAAAATACAATATATGTATATATACGCATACATTTATATTTA  685

seq1  TATACACACATACATACATCATTAACAGTTGTTTACTACCACCTCCTACT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACACACATACATACATCATTAACAGTTGTTTACTACCACCTCCTACT  735

seq1  ATACATCATTGTACTATACTTTATTGTTACTATTAACATTCATTCTTTCT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATCATTGTACTATACTTTATTGTTACTATTAACATTCATTCTTTCT  785

seq1  TTGCTGCAGATAAGACTCAGAACCTCATGAATATTAGGCAAACATGTGCC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGCAGATAAGACTCAGAACCTCATGAATATTAGGCAAACATGTGCC  835

seq1  ATAGAGTTCGATCCCCATCCCTGGGCAATACTTTTTTATAACTATTCCCA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGTTCGATCCCCATCCCTGGGCAATACTTTTTTATAACTATTCCCA  885

seq1  CAGAAAGCTGTTTACACCAACATCACCAAAAATATATCATTCCCTACTGG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGCTGTTTACACCAACATCACCAAAAATATATCATTCCCTACTGG  935

seq1  AACATTATCATAGCTATGATGTCACTAGGTAATATGAACTTTTCATCTCT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTATCATAGCTATGATGTCACTAGGTAATATGAACTTTTCATCTCT  985

seq1  ATTGTAATATTGGGGAACCACAATTACACATGCAGTCTACCACTGAAATA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAATATTGGGGAACCACAATTACACATGCAGTCTACCACTGAAATA  1035

seq1  TCATTTCACCATGAGTGACTAGTGTAATGTAGATAGTGTTTTATCTAACT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCACCATGAGTGACTAGTGTAATGTAGATAGTGTTTTATCTAACT  1085

seq1  GCTTTAGTATGAGTTTTTGATGATAATTCACATAGAATGTGTCAACAACT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAGTATGAGTTTTTGATGATAATTCACATAGAATGTGTCAACAACT  1135

seq1  TATGAATTTTTATAGTTGAATTGAATTC  1172
      ||||||||||||||||||||||||||||
seq2  TATGAATTTTTATAGTTGAATTGAATTC  1163