BAC Information

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BAC

Clone NameB6Ng01-349A10
Chromosome3 (Build37)
Map Location 138,986,221 - 138,986,991
singlet/doubletsinglet
Overlap geneB930007M17Rik
Upstream geneAdh6a, LOC639769, Adh4, Adh5, Metap1, EG383925, EG668879, Eif4e, EG545570, LOC668881, LOC668882, Ppia-ps3_1437.1, Tspan5, LOC620771, Rap1gds1, EG229879
Downstream geneLOC100039840, LOC229883
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-349A10.bB6Ng01-349A10.g
ACCGA130137GA130138
length9761,011
definitionB6Ng01-349A10.b B6Ng01-349A10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacaggaaacca
gtagccaccatcaaagtaaatggtgagaagcttgaagcaatcccactaaa
atcagggactagacaaggctgtccactctctccctacctagtcaacattg
tacttgaagtcctagccagagcaattagacaacaaaaggagatcaattgg
atacaaattggaaaggaagaagtcaaaatatcactttttcagatgatatg
atagtatatatatacgtgaccctaaaaattccaccagagaactcctaagc
ctgataaacagcttcagtgaagtagctggatataaaattaactcaaacaa
gtcaatggcctttctctacacaaaggacaaacaggctgagaaagaaatta
gggaaacaacacccttctcaatagccacaaataatataaaataccttggc
atgactctaactaaggaagtgaaagatctgtatgacaagaacttcatgtc
tctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccat
gctcatggatcggcaggatcaatatagtaaaaatggctatcttgccaaaa
gcaatctacagattcaatgcaatccccatcaaaattccaactcaattctt
caaagaattagaaagggcaatcggcagattcatctgaaataacaaaaaac
cgaggatagcaaaaactcttctcaaggataaaagaacctctggtgggatc
accatgcctgacctaaagctttactacagagcaattgtgataaaaactgc
atggtactggtatagtgacagacaagtagaccaatggaatagaattgaag
acccagaaatgaacccacacacctatggtcacttgatctttttttttttt
tttttttatttttttttccattttttattaggtatttagctcatttacat
ttcaatgctaataacaaaagtccccc
gaattcattaaagttacttcatgaaaaaatttactcttcttaaaggtctc
tccattttattccatagtcttcatgtgtggatatgcttatatgtgcaggg
tatgtcatggtacacctgtgaaggtcagagaccattcacagtgggctttt
ctccttccaacatgaggtttctggggattgaattccaaagttcaggcttg
gcagcaaacatctgcacccactgtgactgctatgttcatgtaaactagac
acaaacacagtcatccaagagaagggtagtcaaactcagtagtgtaagcg
tcatccaggtggcccatgaagggctcatggagaacagctgaggctcagca
ctgtgaggggccaagagaggtcattgatgtaggtactggtttaggagcag
ttgaatgcccaggattaaaggggtagtgcagagacttggcaacatgcaga
gagcccaagagagctattgtgaaagtttagcctagttgcaacagaagacc
ctagtattttgcagatgccagtaccatgtgaccaccaccaagaacagcag
caatacatttttttttttaaaaaaatctttttttaaaattttatttttat
ttattcccttcacatacctttcaccgcccctgctcctagtcacccccttc
aacaaaccttccctctacccctccccttgtcctctgagagggtggaggtc
cccatggatatcgccacaccctgacacatcaagtccctgcagggctagat
gcatcctcccccactggggccagacaagacagcccagctagaagaacgtc
catcgccttcacacaggcagcagcttttgggatagcctctgctccaactg
aagctggaccctcagaagaccaagctgcacatctattacatgtgttcagg
gaggactaggtccagcttgtgtatgttggtggttcagtctctgagagccc
taaggttagctgactctgttggtgttcctggtggagttcctatcttcttc
aggactcaact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_138986221_138986991
seq2: B6Ng01-349A10.g_68_838

seq1  GAATTCATTAAAGTTACTTCATGAAAAAATTTACTCTTCTTAAAGGTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAAAGTTACTTCATGAAAAAATTTACTCTTCTTAAAGGTCTC  50

seq1  TCCATTTTATTCCATAGTCTTCATGTGTGGATATGCTTATATGTGCAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTTATTCCATAGTCTTCATGTGTGGATATGCTTATATGTGCAGGG  100

seq1  TATGTCATGGTACACCTGTGAAGGTCAGAGACCATTCACAGTGGGCTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCATGGTACACCTGTGAAGGTCAGAGACCATTCACAGTGGGCTTTT  150

seq1  CTCCTTCCAACATGAGGTTTCTGGGGATTGAATTCCAAAGTTCAGGCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCCAACATGAGGTTTCTGGGGATTGAATTCCAAAGTTCAGGCTTG  200

seq1  GCAGCAAACATCTGCACCCACTGTGACTGCTATGTTCATGTAAACTAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAAACATCTGCACCCACTGTGACTGCTATGTTCATGTAAACTAGAC  250

seq1  ACAAACACAGTCATCCAAGAGAAGGGTAGTCAAACTCAGTAGTGTAAGCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACACAGTCATCCAAGAGAAGGGTAGTCAAACTCAGTAGTGTAAGCG  300

seq1  TCATCCAGGTGGCCCATGAAGGGCTCATGGAGAACAGCTGAGGCTCAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCAGGTGGCCCATGAAGGGCTCATGGAGAACAGCTGAGGCTCAGCA  350

seq1  CTGTGAGGGGCCAAGAGAGGTCATTGATGTAGGTACTGGTTTAGGAGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGGGGCCAAGAGAGGTCATTGATGTAGGTACTGGTTTAGGAGCAG  400

seq1  TTGAATGCCCAGGATTAAAGGGGTAGTGCAGAGACTTGGCAACATGCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATGCCCAGGATTAAAGGGGTAGTGCAGAGACTTGGCAACATGCAGA  450

seq1  GAGCCCAAGAGAGCTATTGTGAAAGTTTAGCCTAGTTGCAACAGAAGACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCAAGAGAGCTATTGTGAAAGTTTAGCCTAGTTGCAACAGAAGACC  500

seq1  CTAGTATTTTGCAGATGCCAGTACCATGTGACCACCACCAAGAACAGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTATTTTGCAGATGCCAGTACCATGTGACCACCACCAAGAACAGCAG  550

seq1  CAATACATTTTTTTTTTTAAAAAAATCTTTTTTTAAAATTTTATTTTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACATTTTTTTTTTTAAAAAAATCTTTTTTTAAAATTTTATTTTTAT  600

seq1  TTATTCCCTTCACATACCTTTCACCGCCCCTGCTCCTAGTCACCCCCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCCCTTCACATACCTTTCACCGCCCCTGCTCCTAGTCACCCCCTTC  650

seq1  AACAAACCTTCCCTCTACCCCTCCCCTTGTCCTCTGAGAGGGTGGAGGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACCTTCCCTCTACCCCTCCCCTTGTCCTCTGAGAGGGTGGAGGTC  700

seq1  CCCATGGATATCGCCACACCCTGACACATCAAGTCCCTGCAGGGCTAGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGGATATCGCCACACCCTGACACATCAAGTCCCTGCAGGGCTAGAT  750

seq1  GCATCCTCCCCCACTGGGGCC  771
      |||||||||||||||||||||
seq2  GCATCCTCCCCCACTGGGGCC  771