BAC Information

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BAC

Clone NameB6Ng01-349E02
Chromosome3 (Build37)
Map Location 150,574,073 - 150,575,219
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040633, LOC100040455, LOC100040463, LOC623554
Downstream geneEltd1, Ifi44, H28, Ptgfr
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-349E02.bB6Ng01-349E02.g
ACCGA130303GA130304
length1,2401,154
definitionB6Ng01-349E02.b B6Ng01-349E02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttattgatggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtctacagcaaaccagt
agccaacatcaaagtaaatggagagaagctgggagcaatcccactaaaat
cagggactagacaaggctgcccactttctccctaccttttcaacatagta
cttgaagtattagccagagcaattcgacaacaaaaggagatcaaggggat
acaaattggaaaagaggaagtcaaaatatcactttttgcagatgatatga
tagtatatataagtgaccctaaaaattctaccaggagaactcctaaacct
gataaacagcttcaacgaagtagctggatataaaattaactcaacaagtc
aatggcctttctctatacaaaagaataaacaggctgagaaagaaattagg
gaaacaacacccttctcaatagtcaacaaataatataaaatatcttggcg
tgactctaactaaggaagtgaaagaatctgtatgataaaaacttcaaatc
tcttgaagaaagaaaatttatgaaggatctcagaagaatgggaaagaatc
tcccatgctcatgattggtagggatcaacattgttaaaattggctatcct
gccaaagcaatcttacagatccatgccatccattccattccactcaattt
cttcaaccgaatttgtagaaggagaccaatttgttgacta

gaattcttcagaatattacaaatagtagcattattgattatgatcagata
ataaacagtttatttaagtatcagagtacgttcttatggactttattacc
catggaaaaaactaaaggagcaaagcacgaaaaaagttaatattttatga
taaggagtttcatttattgaaatattcatttaatatacattttgttttat
ttaatattgatatacttaatagatgatgtatttgatcaaaactgcgagct
taaatgcagagtcctaattagcaggcagtggacataaagaggagaatgat
gtgtctgatttaatagactgaactacatctgcttctaaaattgattagtc
tttttattgagagattaatccatttcaaaaggtgatgcatctttaatacg
agttaaatcaaatctatactttctcccccttagtctgcaaaggtaacgag
aggaacaagtttgccctcaagtggacttcaaaggcagatcagagattcaa
agagcaaaaaaaccaaaacaaagcggtatcatgagttcctgtgttcagat
cattatagtgaaggataaacaccatgtcctgtttcttttggaacatagtt
tctcttctggggatcttatgttttttgttgttgttttgttttgctttttc
cttgatgagccacctttctcctgtcattgaagttcattcaccagtccatt
tttatgcagaagttttctgtgattaattaaaatttcacatatttgaaaaa
tgcctatggtttcctatccaataaatagtcacaccataaaggaatgacta
ggaaaaactcaaaacaaaataatctgtaatggcatattttgatgatttga
ttttattttctgttgtgttttactggagcaagtgagagaacataaaagac
agacagagagaccaagaaagacagagacagtaagacagagagacaaagaa
acaggctgaaaccaaggaagccagagagacagtgaatggattattagtgg
ctgggaggatctggaagtattagagtagaggaaagtatatgatcaaatag
atttaacatgaaaataatattccctccttaaaaacagcaccatgtcttaa
ataaggtgttcccagtcttttagtacattctcacagaaaggaataacaat
gctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_150574073_150575219
seq2: B6Ng01-349E02.g_68_1221

seq1  GAATTCTTCAGAATATTACAAATAGTAGCATTATTGATTATGATCAGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGAATATTACAAATAGTAGCATTATTGATTATGATCAGATA  50

seq1  ATAAACAGTTTATTTAAGTATCAGAGTACGTTCTTATGGACTTTATTACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACAGTTTATTTAAGTATCAGAGTACGTTCTTATGGACTTTATTACC  100

seq1  CATGGAAAAAACTAAAGGAGCAAAGCACGAAAAAAGTTAATATTTTATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAAAAAACTAAAGGAGCAAAGCACGAAAAAAGTTAATATTTTATGA  150

seq1  TAAGGAGTTTCATTTATTGAAATATTCATTTAATATACATTTTGTTTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAGTTTCATTTATTGAAATATTCATTTAATATACATTTTGTTTTAT  200

seq1  TTAATATTGATATACTTAATAGATGATGTATTTGATCAAAACTGCGAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATTGATATACTTAATAGATGATGTATTTGATCAAAACTGCGAGCT  250

seq1  TAAATGCAGAGTCCTAATTAGCAGGCAGTGGACATAAAGAGGAGAATGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGCAGAGTCCTAATTAGCAGGCAGTGGACATAAAGAGGAGAATGAT  300

seq1  GTGTCTGATTTAATAGACTGAACTACATCTGCTTCTAAAATTGATTAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTGATTTAATAGACTGAACTACATCTGCTTCTAAAATTGATTAGTC  350

seq1  TTTTTATTGAGAGATTAATCCATTTCAAAAGGTGATGCATCTTTAATACG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTGAGAGATTAATCCATTTCAAAAGGTGATGCATCTTTAATACG  400

seq1  AGTTAAATCAAATCTATACTTTCTCCCCCTTAGTCTGCAAAGGTAACGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAATCAAATCTATACTTTCTCCCCCTTAGTCTGCAAAGGTAACGAG  450

seq1  AGGAACAAGTTTGCCCTCAAGTGGACTTCAAAGGCAGATCAGAGATTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACAAGTTTGCCCTCAAGTGGACTTCAAAGGCAGATCAGAGATTCAA  500

seq1  AGAGCAAAAAAACCAAAACAAAGCGGTATCATGAGTTCCTGTGTTCAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAAAAAAACCAAAACAAAGCGGTATCATGAGTTCCTGTGTTCAGAT  550

seq1  CATTATAGTGAAGGATAAACACCATGTCCTGTTTCTTTTGGAACATAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATAGTGAAGGATAAACACCATGTCCTGTTTCTTTTGGAACATAGTT  600

seq1  TCTCTTCTGGGGATCTTATGTTTTTTGTTGTTGTTTTGTTTTGCTTTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCTGGGGATCTTATGTTTTTTGTTGTTGTTTTGTTTTGCTTTTTC  650

seq1  CTTGATGAGCCACCTTTCTCCTGTCATTGAAGTTCATTCACCAGTCCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATGAGCCACCTTTCTCCTGTCATTGAAGTTCATTCACCAGTCCATT  700

seq1  TTTATGCAGAAG-TTTCTGTGATTAATTAAAATTTCACATA-TTGAAAAA  748
      |||||||||||| |||||||||||||||||||||||||||| ||||||||
seq2  TTTATGCAGAAGTTTTCTGTGATTAATTAAAATTTCACATATTTGAAAAA  750

seq1  TGCCTATGGTTTCCTATCCAATAAATAGTCACACCATAAAGGAA-GACTA  797
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGCCTATGGTTTCCTATCCAATAAATAGTCACACCATAAAGGAATGACTA  800

seq1  GGAAAAACTCAAAACAAAATAATCTGTAATGGCATATTTTGATGATTTGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAACTCAAAACAAAATAATCTGTAATGGCATATTTTGATGATTTGA  850

seq1  TTTTATTTTCTGTTGTGTTTTACTGGAGCAAGTGAGAGAACATAAAAGAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTCTGTTGTGTTTTACTGGAGCAAGTGAGAGAACATAAAAGAC  900

seq1  AGACAGAGAGACCAAGAAAGACAGAGACAGTAAGACAGAGAGACAAAGAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAGAGACCAAGAAAGACAGAGACAGTAAGACAGAGAGACAAAGAA  950

seq1  ACAGGCTGAAACCAAGGGAGCCAGAGAGACAGTGAATGGATAATTAGGGG  997
      ||||||||||||||||| ||||||||||||||||||||||| ||||| ||
seq2  ACAGGCTGAAACCAAGGAAGCCAGAGAGACAGTGAATGGATTATTAGTGG  1000

seq1  CTGGGAGGATCTGGGAAGAATAGAGGAAGAGGAAAGTATATGATCAAAAT  1047
      |||||||||||||| |  | |||| | |||||||||||||||||| ||||
seq2  CTGGGAGGATCTGGAAGTATTAGA-GTAGAGGAAAGTATATGATC-AAAT  1048

seq1  AGATTTTAACATGA----AATATATCCT-CTTAAAAACAAGCACCATGGC  1092
      ||| ||||||||||    |||||  ||| ||||||||| ||||||||| |
seq2  AGA-TTTAACATGAAAATAATATTCCCTCCTTAAAAAC-AGCACCATGTC  1096

seq1  -TAAATAA-GTGGTCCCAGTCTTTTAGTAC-TTCTCACAGAAAGGAATAA  1139
       ||||||| ||| ||||||||||||||||| |||||||||||||||||||
seq2  TTAAATAAGGTGTTCCCAGTCTTTTAGTACATTCTCACAGAAAGGAATAA  1146

seq1  ACATGCTG  1147
        ||||||
seq2  CAATGCTG  1154


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