BAC Information

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BAC

Clone NameB6Ng01-349F18
Chromosome3 (Build37)
Map Location 76,126,402 - 76,156,478
singlet/doubletdoublet
Overlap geneFstl5
Upstream geneWdr49, Pdcd10, Serpini1, Golph4
Downstream geneLOC100041625, LOC100041635
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-349F18.bB6Ng01-349F18.g
ACCGA130377GA130378
length1,1431,128
definitionB6Ng01-349F18.b B6Ng01-349F18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,126,402 - 76,127,557)(76,155,328 - 76,156,478)
sequence
gaattctgatattcatttatgagactaaagctggccaaattctgactcat
aatttaatatagaaatcagtattgggccatatggtttcccaatcacagaa
ttattatagggagagagggtagccagtttagtctgtaggccaaatatcac
cagtataaagcacctagaatcctggtgaggagccagggaatgccaagctg
ggctgttgtggcttgtcattgctttctgatgtacagagtaatttcagttt
gcagcacacgactcaagttaaatgcaatttctgattgcccacttcagcaa
caataaagtcataagaaactcatttagcaaatctgaggcaatgatagttt
aacattttaaagtattatttacacttttaatacaattgaaatgatggttt
aatgaatagtacttctgaattagtaattagagatagtattttagtgtgtt
ctatacatatatcatcaaatggactttatcatcgcttacttatttatacc
ttgatttgttacattgttatttcagttggagggaatatttcctttctagt
gtcatgacttacttaaattctagggtcaaatataaagccatccacagttc
taataggtcaatgatcaagtgtattcttgaagttgtaaatttctgcatct
cagttaatcgaaatacttaactgcattcacaatatagaaattacaggtta
tttcacttttgaatttgagataaaatatattgtaaccctttatttcccta
tttatcaaataaaattaaagatttaaagttattccttttcattatagttt
ttcaataaaatgtatttttcaaggagataaaaatgataacaggaaacttt
taagacaaagtaagatgtggtatgccgtggaacattgtggcttctagaag
caacatactatttttgtgaaagagtaagaataatatgtttattcactgca
acctgagtatatttttcagagtttcatcacagtagattctattcatttac
caaattgtagattttttggattcaattatctctttcagttttcatataac
caatgatctcagacatagttgttatgttagactttgaagggtaacttttt
ctgtcatttagctagatgtagataaaatatattatcacactga
gaattctcctatggcatgcttgctactgctgtcacagattaactgcaatt
tgtaagaacaataaaacaatcctaggaaaacagatatgtcaaattaagat
gcaaaagagttgcatgggaaataactagcagaaaaggctatcagatcaac
ctgctgtgtgagtggaaattagaatcaatcgttatttgttctagtcacct
ttctagctatgtaacaacaacaacaacaaaacaacaacaatacattctga
agtactttacatataaaataaaactcactgtgagtgaagtttcttgggag
aacttgtgtctacaagtgtttgtgactgattagaacttcaatgatgttga
gaagttagaataatgtgagtccagattcacattatcttgaggcatcttca
gccccctattaatcatttattgttatcctttgtattttatttaagatctg
ttggaagcattacataaaattattgtactatataaagaaacacttagttc
tcaaatcagagatgaagcattctgtctgatagcaacacaggattgtaata
taatgatcactagtttgctttaatctgctaacctcctacacccaccaatg
cattggaaaagtgtgtttgatgtctatcttctattactataaatatttat
gaaactgttacctcattgcaacttgaatttgaggtgatgtaaatcaagta
ccacactacatcattggccactcatatttagcctcagaataaatgatgtt
tcctttaagataaagattgtaattttacattgacagatttatttggctca
tgatttaagaaatctatctctaattctatctctaattctagacatttctt
ttactccatgatctgtgacagtagtaaggaagatgtggtgcagcaaaacg
ccatcataagaaaatgaaagaaaaaagttaaaggcatcttcaaggtaata
aagtgattgcctaaaaaatcgaagcaaataatcattaaattctcacaact
taatcttcagacacatcaaaacatcattcacacatcagtaagctcatcag
ggtgaggatagctcatatcaggaaatgtgttcatgtaatctgtcatataa
caacctcaattaatatagatcacctcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_76126402_76127557
seq2: B6Ng01-349F18.b_45_1187

seq1  GAATTCTGATATTCATTTATGAGACTAAAGCTGGCCAAATTCTGACTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGATATTCATTTATGAGACTAAAGCTGGCCAAATTCTGACTCAT  50

seq1  AATTTAATATAGAAATCAGTATTGGGCCATATGGTTTCCCAATCACAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAATATAGAAATCAGTATTGGGCCATATGGTTTCCCAATCACAGAA  100

seq1  TTATTATAGGGAGAGAGGGTAGCCAGTTTAGTCTGTAGGCCAAATATCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATAGGGAGAGAGGGTAGCCAGTTTAGTCTGTAGGCCAAATATCAC  150

seq1  CAGTATAAAGCACCTAGAATCCTGGTGAGGAGCCAGGGAATGCCAAGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATAAAGCACCTAGAATCCTGGTGAGGAGCCAGGGAATGCCAAGCTG  200

seq1  GGCTGTTGTGGCTTGTCATTGCTTTCTGATGTACAGAGTAATTTCAGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTTGTGGCTTGTCATTGCTTTCTGATGTACAGAGTAATTTCAGTTT  250

seq1  GCAGCACACGACTCAAGTTAAATGCAATTTCTGATTGCCCACTTCAGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCACACGACTCAAGTTAAATGCAATTTCTGATTGCCCACTTCAGCAA  300

seq1  CAATAAAGTCATAAGAAACTCATTTAGCAAATCTGAGGCAATGATAGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAAGTCATAAGAAACTCATTTAGCAAATCTGAGGCAATGATAGTTT  350

seq1  AACATTTTAAAGTATTATTTACACTTTTAATACAATTGAAATGATGGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTTAAAGTATTATTTACACTTTTAATACAATTGAAATGATGGTTT  400

seq1  AATGAATAGTACTTCTGAATTAGTAATTAGAGATAGTATTTTAGTGTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATAGTACTTCTGAATTAGTAATTAGAGATAGTATTTTAGTGTGTT  450

seq1  CTATACATATATCATCAAATGGACTTTATCATCGCTTACTTATTTATACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACATATATCATCAAATGGACTTTATCATCGCTTACTTATTTATACC  500

seq1  TTGATTTGTTACATTGTTATTTCAGTTGGAGGGAATATTTCCTTTCTAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTGTTACATTGTTATTTCAGTTGGAGGGAATATTTCCTTTCTAGT  550

seq1  GTCATGACTTACTTAAATTCTAGGGTCAAATATAAAGCCATCCACAGTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGACTTACTTAAATTCTAGGGTCAAATATAAAGCCATCCACAGTTC  600

seq1  TAATAGGTCAATGATCAAGTGTATTCTTGAAGTTGTAAATTTCTGCATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGGTCAATGATCAAGTGTATTCTTGAAGTTGTAAATTTCTGCATCT  650

seq1  CAGTTAATCGAAATACTTAACTGCATTCACAATATAGAAATTACAGGTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAATCGAAATACTTAACTGCATTCACAATATAGAAATTACAGGTTA  700

seq1  TTTCACTTTTGAATTTGAGATAAAATATATTGTAACCCTTTATTTCCCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTTTTGAATTTGAGATAAAATATATTGTAACCCTTTATTTCCCTA  750

seq1  TTTATCAAATAAAATTAAAGATTTAAAGTTATTCCTTTTCATTATAGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCAAATAAAATTAAAGATTTAAAGTTATTCCTTTTCATTATAGTTT  800

seq1  TTCAATAAAATGTATTTTTCAAGGAGATAAAAATGATAACAGGAAACTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATAAAATGTATTTTTCAAGGAGATAAAAATGATAACAGGAAACTTT  850

seq1  TAAGACAAAGTAAGATGTGGTATGCCGTGGAACATTGTGGCTTCTAGAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACAAAGTAAGATGTGGTATGCCGTGGAACATTGTGGCTTCTAGAAG  900

seq1  CAACATACTATTTTTGTGAAAGAGTAAGAATAATATGTTTATTCACTGCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATACTATTTTTGTGAAAGAGTAAGAATAATATGTTTATTCACTGCA  950

seq1  ACCTGAGTATATTTTTCAGAGTTTCATCACAGTAGATTCTATTCATTTAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAGTATATTTTTCAGAGTTTCATCACAGTAGATTCTATTCATTTAC  1000

seq1  CAAATTGTAGATTTTTTGGATTCAAATTAATCTCTTTCAGTTTTCAATAT  1050
      |||||||||||||||||||||||||  | |||||||||||||||| ||||
seq2  CAAATTGTAGATTTTTTGGATTCAA--TTATCTCTTTCAGTTTTC-ATAT  1047

seq1  AACCAATGATCTCAGAACATAGTTGTTTATGTTAGACTTTGAAAGGGAAA  1100
      ||||||||||||||| ||||||||| |||||||||||||||||  ||  |
seq2  AACCAATGATCTCAG-ACATAGTTG-TTATGTTAGACTTTGAA--GGGTA  1093

seq1  ACTTTTTCTGTCATTTAGCCTAAGATGGTAGGATAAAAAATATATTATCA  1150
      |||||||||||||||||||   |||| ||||   | ||||||||||||||
seq2  ACTTTTTCTGTCATTTAGC--TAGAT-GTAG---ATAAAATATATTATCA  1137

seq1  CACTGA  1156
      ||||||
seq2  CACTGA  1143

seq1: chr3_76155328_76156478
seq2: B6Ng01-349F18.g_66_1193 (reverse)

seq1  ATGAGGTGATCTTATTATTTTATTTTGAGTTTGTTTATATGACAGATTAC  50
      |||||||||||    ||| |||  ||||| ||| ||||||||||||||||
seq2  ATGAGGTGATC----TATATTA-ATTGAGGTTG-TTATATGACAGATTAC  44

seq1  ACTGACACATTTTCTTATATTGAGCTATCCCTCCACCCCTGGAATGAAGC  100
      |   |||||||| || ||| |||||||| ||||   |||||  ||| |||
seq2  ATGAACACATTTCCTGATA-TGAGCTAT-CCTC--ACCCTG--ATG-AGC  87

seq1  TTACTTGATTGTGGTGAATGATGTTTTTGATGTGTTCTG-AGATTAAGTT  149
      |||| ||| ||| |||||||||| |||||||||| |||| |||||||| |
seq2  TTAC-TGA-TGT-GTGAATGATG-TTTTGATGTG-TCTGAAGATTAAG-T  131

seq1  TGTGAGAATTTTATTGATTATTTTTGCTTCGATTTTTTTAGGCAATCACT  199
      |||||||| |||| ||||||  |||||||||| |||||||||||||||||
seq2  TGTGAGAA-TTTAATGATTA--TTTGCTTCGA-TTTTTTAGGCAATCACT  177

seq1  TTATTACCTTGAAGATGCCTTTAACTTTTTTCTTTCATTTTCTTATGATG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTACCTTGAAGATGCCTTTAACTTTTTTCTTTCATTTTCTTATGATG  227

seq1  GCGTTTTTGCTGCACCACATCTTCCTTACTACTGTCACAGATCATGGAGT  299
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCG-TTTTGCTGCACCACATCTTCCTTACTACTGTCACAGATCATGGAGT  276

seq1  AAAAGAAATGTCTAGAATTAGAGATAGAATTAGAGATAGATTTCTTAAAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAATGTCTAGAATTAGAGATAGAATTAGAGATAGATTTCTTAAAT  326

seq1  CATGAGCCAAATAAATCTGTCAATGTAAAATTACAATCTTTATCTTAAAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGCCAAATAAATCTGTCAATGTAAAATTACAATCTTTATCTTAAAG  376

seq1  GAAACATCATTTATTCTGAGGCTAAATATGAGTGGCCAATGATGTAGTGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATCATTTATTCTGAGGCTAAATATGAGTGGCCAATGATGTAGTGT  426

seq1  GGTACTTGATTTACATCACCTCAAATTCAAGTTGCAATGAGGTAACAGTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTTGATTTACATCACCTCAAATTCAAGTTGCAATGAGGTAACAGTT  476

seq1  TCATAAATATTTATAGTAATAGAAGATAGACATCAAACACACTTTTCCAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAATATTTATAGTAATAGAAGATAGACATCAAACACACTTTTCCAA  526

seq1  TGCATTGGTGGGTGTAGGAGGTTAGCAGATTAAAGCAAACTAGTGATCAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTGGTGGGTGTAGGAGGTTAGCAGATTAAAGCAAACTAGTGATCAT  576

seq1  TATATTACAATCCTGTGTTGCTATCAGACAGAATGCTTCATCTCTGATTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTACAATCCTGTGTTGCTATCAGACAGAATGCTTCATCTCTGATTT  626

seq1  GAGAACTAAGTGTTTCTTTATATAGTACAATAATTTTATGTAATGCTTCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACTAAGTGTTTCTTTATATAGTACAATAATTTTATGTAATGCTTCC  676

seq1  AACAGATCTTAAATAAAATACAAAGGATAACAATAAATGATTAATAGGGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGATCTTAAATAAAATACAAAGGATAACAATAAATGATTAATAGGGG  726

seq1  GCTGAAGATGCCTCAAGATAATGTGAATCTGGACTCACATTATTCTAACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAGATGCCTCAAGATAATGTGAATCTGGACTCACATTATTCTAACT  776

seq1  TCTCAACATCATTGAAGTTCTAATCAGTCACAAACACTTGTAGACACAAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAACATCATTGAAGTTCTAATCAGTCACAAACACTTGTAGACACAAG  826

seq1  TTCTCCCAAGAAACTTCACTCACAGTGAGTTTTATTTTATATGTAAAGTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCCAAGAAACTTCACTCACAGTGAGTTTTATTTTATATGTAAAGTA  876

seq1  CTTCAGAATGTATTGTTGTTGTTTTGTTGTTGTTGTTGTTACATAGCTAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGAATGTATTGTTGTTGTTTTGTTGTTGTTGTTGTTACATAGCTAG  926

seq1  AAAGGTGACTAGAACAAATAACGATTGATTCTAATTTCCACTCACACAGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTGACTAGAACAAATAACGATTGATTCTAATTTCCACTCACACAGC  976

seq1  AGGTTGATCTGATAGCCTTTTCTGCTAGTTATTTCCCATGCAACTCTTTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGATCTGATAGCCTTTTCTGCTAGTTATTTCCCATGCAACTCTTTT  1026

seq1  GCATCTTAATTTGACATATCTGTTTTCCTAGGATTGTTTTATTGTTCTTA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTAATTTGACATATCTGTTTTCCTAGGATTGTTTTATTGTTCTTA  1076

seq1  CAAATTGCAGTTAATCTGTGACAGCAGTAGCAAGCATGCCATAGGAGAAT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTGCAGTTAATCTGTGACAGCAGTAGCAAGCATGCCATAGGAGAAT  1126

seq1  TC  1151
      ||
seq2  TC  1128