BAC Information

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BAC

Clone NameB6Ng01-349G11
Chromosome3 (Build37)
Map Location 146,409,485 - 146,409,731
singlet/doubletsinglet
Overlap genePrkacb
Upstream geneDdah1, LOC100040331, Bcl10, 2410004B18Rik, Syde2, Wdr63, Mcoln3, Mcoln2, Edg7, Ssx2ip, Ctbs, Spata1, Gng5, Bxdc5, LOC100040473, Dnase2b, Uox, 4930503B20Rik, Gm1652, LOC670100
Downstream geneLOC100040540, Ttll7, Ppia-ps3_1528.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-349G11.bB6Ng01-349G11.g
ACCGA130408GA130409
length1,208247
definitionB6Ng01-349G11.b B6Ng01-349G11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaaactcaaatggcagggaagcacctaaagaaatg
tgcaacatccttagtcatcaggggaatgcaaatcaaaacaaccctgaaat
ttcacctcacaccagtcagaatagctaagataaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtttggtggttcctca
gaaaactggacatagaactacctgaggacccagctatacaactcctgggc
atatactcagaagatgctccaacatgtaataaggacacatgctccactct
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gtccctcaacagaagaatgaatacagaaaatgtgggtacatttacacaat
ggagtacttctcagttattaaaaaattcatgaaattcacaggcaaatgga
tgggacttgaaaatatcatcctgagtgaggtaactcagtcacaaaagaac
acacatagtatgtactcactgataagtggatattagcccaaaagttcagg
atacccatgactcaattcacagtccatatgaagcctaagaagaaggaaga
ccaaaacatggctgcttcattgcttcttagaagggtgaacaaaatactta
caggaagaaatatggagactaagtgtggagcagagactgaagaaaaggcc
atccagagactgctccacctggggatctattccatatacagctaccaaac
ccagatgttattgtggatgctgggaagtgcttgctgatggaagcctgata
tggctgtctccagagaggctctgccagagcctgacaaatacagaggcaga
tgcttgcagccaaccattggactgagcatgggggtccctgatggaggagt
tggagaagggactgaaagagttgagaggtttgcagccccatggagggagc
aacattgtcacaggacagatccctggagctcccagggactggaccacacc
aaagaatacacatggatgggacccatggtgctggcaattattgtatgttg
cagaggatggccttgtggacatcaattggagaagagccttggacctgggg
gttcgacgcctgatgtatgggaaatgcaggtgggaaaattgaaaatgtgg
tgaaggta
ttaactttggatttgagtacaggacctctgtactctgtgagtgagttttc
acattcctgtttcccttcataggtcacagatttcgggttcgccaaaagag
tcaagggcaggacatggacattgtgtggcaccccagagtacctggccccg
gagatcatcctcagcaaggtactgggtatgactggcacacacaggcagaa
gcttgaagtcctttaagttataagggggagtgggtgggtaggggatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_146409485_146409731
seq2: B6Ng01-349G11.g_73_319 (reverse)

seq1  AATCCCCTACCCACCCACTCCCCCTTATAACTTAAAGGACTTCAAGCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCCTACCCACCCACTCCCCCTTATAACTTAAAGGACTTCAAGCTTC  50

seq1  TGCCTGTGTGTGCCAGTCATACCCAGTACCTTGCTGAGGATGATCTCCGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTGTGTGCCAGTCATACCCAGTACCTTGCTGAGGATGATCTCCGG  100

seq1  GGCCAGGTACTCTGGGGTGCCACACAATGTCCATGTCCTGCCCTTGACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGGTACTCTGGGGTGCCACACAATGTCCATGTCCTGCCCTTGACTC  150

seq1  TTTTGGCGAACCCGAAATCTGTGACCTATGAAGGGAAACAGGAATGTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGCGAACCCGAAATCTGTGACCTATGAAGGGAAACAGGAATGTGAA  200

seq1  AACTCACTCACAGAGTACAGAGGTCCTGTACTCAAATCCAAAGTTAA  247
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCACTCACAGAGTACAGAGGTCCTGTACTCAAATCCAAAGTTAA  247